Celi012305.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crocallis elinguaria
Gene Symbol
-
Assembly
GCA_907269065.1
Location
OU026076.1:14358548-14371485[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.087 6.8 8.0 0.0 3 23 136 156 134 156 0.95
2 14 0.0082 0.64 11.2 3.4 1 23 247 269 247 269 0.99
3 14 2.3e-05 0.0018 19.3 0.6 1 23 275 298 275 298 0.97
4 14 0.16 12 7.2 6.6 1 23 303 326 303 326 0.93
5 14 3.7e-06 0.00029 21.7 2.0 2 23 514 535 513 535 0.97
6 14 0.00028 0.021 15.8 2.1 1 23 541 563 541 563 0.98
7 14 9.7 7.6e+02 1.5 7.5 1 23 629 651 629 651 0.96
8 14 0.45 35 5.7 1.6 1 22 685 706 685 706 0.95
9 14 1.3e-05 0.001 20.0 2.9 1 23 718 740 718 740 0.98
10 14 0.0087 0.68 11.1 5.2 1 23 749 771 749 771 0.99
11 14 0.0003 0.023 15.7 1.0 3 23 820 840 819 840 0.98
12 14 0.002 0.16 13.1 3.9 1 23 857 879 857 879 0.97
13 14 4.7e-06 0.00037 21.4 0.4 3 23 887 907 885 907 0.96
14 14 1.2e-06 9.7e-05 23.2 2.4 1 23 913 936 913 936 0.98

Sequence Information

Coding Sequence
ATGAACAATCAGATGATGATAGATATAGACCCGTTGAGCTCGTATGAAGCACAGTATGACTACCCCCATCCTAACCCTCATTTTTACCCCCATCCACCTCACTCAACTATCGCTTATCCTCATAAAAGTGATGACACTCCTCAAATGTTTCCTCCTCCTTACCAACCAATCTTGCCAGAAGCTCCAAAAAGTCCTGTTAGCGGAACCAATAACGTTGCTCAAGATTATAGTACAGAAATTACTGCAGCAGCACCCGAAACAAATGAGGAAGAAGAAGATATCAAGCCAGTTATAGATATGGTACCCTTACCGGAAGACAAACCAAAACGTAATAGAAAAATCAAAGGAAAGACAAGTAATTATTGGAATAAGAAGATAACGGACAAAAGTTTCGCTTTCTACGGATGCTCCGTTTGCAATATAGCTTACACAGACCTAACAGACCTAGATCAACACGTAGTAATTCATTCAAACCGAATGACAAGCTATGATTTGAGAATACAAAACTTGAAGAAACGCAAGCGCCTCAAAAGAGAAAAGAAAAAGCAGAAAAAACAGTCTAAAGTCAAACAGGAATTGGAAATTGATATTAAACCCGAAGACGGTTACATTGGCACGGAGGAAGCTTCAAAATTTGACAGTGATAACAAAAGCGAGGTTAAAAAATCATGTGCAGTGTCTTCGGAGAATAATGAGAATAATCCAGTAAATAAGTGTTCTAAGAATACAATTAACATTTATCAATGCTTTGGGTGCTGCAAAACATTTGCATTGAGTTACTATTTGAGGATACATGTCAGATCTCATACTGATGAGAAGCCATACTCTTGCGATATATGTAACCAGACGTTTATAACGGCCAGTAAGCTCGGACGCCACACTAAAAGGATTCATAACACTGTGAGGCACCAGTGCCGGATATGCTATAAGCATTTCAATAGGTTTGAATTGCTTGTGAAGCATTTTGATAAGAAACACGCTGAAGACAAACTAGAGGGGGAGCCTTATGACTATAACACGATCCTTCCGTACATAAAAGAGCTAGAAGAACAGTTGAAACTGGAGAAAGAACAGAAGCCAAAGACGGAAGACCCGTGGGTCTTACCGCTGGCTTCTGATACCATGGGTCAGGGTACAGTGGCCACCGCGATGCAGACCCAAGCTGCGGAAGCTAATCTGGTTGCCAAGGAAGAAGTTTTCGTTACAAAAGAAGACGAGGTCATGGTACCTTCCAACGTAGAATTCATTGATGAGAGCAAAGTTGAGCTGGAACTGCAGCCGACAGCTAAAGTAACGGTGGAAGAAGTCAAGCTGGACTTTGACATCAAAGTAGAGATGGAAGACGAGAACCAGCCCCAGGAAGGCCAGGGTGATGATAGGGGCGCGGTCGATGATGACGATGATGACGCGGCTGATGTGAAATGTGAGAAAGAGCAGGGCTCCGATGAAGAATACTTCCCGTCGGACACGTGGGCGCGCTCGCCCCCCGCGCTGCCCGCGGCCCCCTCCCCCCCCAGCGCGCGCAAGCCTAAGTCCACGTCCTGTCAGATATGCAATAAGAAACTCAGCTCCAAGAGCTACTTGCGGATACATATGAGGACGCATACTGGCGAGCGCCCTTTCACATGTTATATTTGCAACCGTGGCTTCATCACCGCCAGCAAAATGCACCGACACGTGTTGACGCACGACGAGTCGTGGGAAGGCAAAGATGGCATCAAACCGGAAGACGGGGAGCCGGATGTGAAATCAGAACCGGATAGCGATGAGAAACCCCTGAAAAAGAAGACGAAAAAGTCGAAAGCGAAAAAGGCGAATGCGAAAATACAAAAGACGAAAAAGACGTTCTTCGAGAAGAAGCAGAAGAAATTCAGAAAATGGAATCACTTCTGCGAGTTTTGTCATCAGAAGTTCCTGCACCTTGAAACCTTGGAAGTCCACAAGAAAAGCCACGAGAAGGCCGATAGTATGAAGTGCCACTTCTGCTTCGAGCCGCAATTAGACGCGGAGTCGCTGAAGGAACACGAGGCGACGCACACTGGACCGAAGCCCTACGTGTGCACGTTGTGCGGAAACTGTTACATGAAACGAGGGTCTATGGTGTATCACAGGAAGACTCGCTGTAAGCTCAGTGAAAACAGCGATAAGACATTCATTTGCGATATCTGCAAGAAACGGTACAACACTCACGGGAAATTACAGCGTCATATGATCACTCATTCAGTGGCCAAATTCACTCTCCGCTACGAGTGCCCGGTGTGTGCACACATGTTCCACACAAGATATCATGTGCAGATGCATCTCAGATCACACATGAAGGAGGGGCTGATATTAGAAGAGAACCGCAACGCAGTTCTAGCGATGGTGCTTCAGAACGCTCGCAAGATACCCAAAATGACAGATGCGACCTCTCACAACTTAACCGACACCGCACCGTCGGACGAGAGGTCACGCATTTGCAACATCTGCGGGCAGATATTCCAGCACTTCTATTACTTAGAGGAGCACCTGAAGACACATGGCTCCAAGATCGCTGTACAAGACTTTGATAAGGAAGAGGAGAAGAAATACACCTGTCAGGTATGCTTCAAATCGTTCAAACTCCAATACTACCTCAAGCTACACAGCTACACGCACACAAAGGAGAAGCCTATCATATGCCAGCAGTGCGGTAAAGGGTTCATCACAAAAGGCAAGCTGAAACGGCACTTAGAAACTCATCAAGGGCTTAAGAAATACCAATGTCATATATGTTACAAGTTCTTTACCCGGCCCGGGTATCTTAGAATACATGTTAGGACTATACATGGAACACAAGATTATAATTTTAGAGATTACGGTATTGGAGTGCCTTTAGGCGCTATCAGTAGAGATTCTTAA
Protein Sequence
MNNQMMIDIDPLSSYEAQYDYPHPNPHFYPHPPHSTIAYPHKSDDTPQMFPPPYQPILPEAPKSPVSGTNNVAQDYSTEITAAAPETNEEEEDIKPVIDMVPLPEDKPKRNRKIKGKTSNYWNKKITDKSFAFYGCSVCNIAYTDLTDLDQHVVIHSNRMTSYDLRIQNLKKRKRLKREKKKQKKQSKVKQELEIDIKPEDGYIGTEEASKFDSDNKSEVKKSCAVSSENNENNPVNKCSKNTINIYQCFGCCKTFALSYYLRIHVRSHTDEKPYSCDICNQTFITASKLGRHTKRIHNTVRHQCRICYKHFNRFELLVKHFDKKHAEDKLEGEPYDYNTILPYIKELEEQLKLEKEQKPKTEDPWVLPLASDTMGQGTVATAMQTQAAEANLVAKEEVFVTKEDEVMVPSNVEFIDESKVELELQPTAKVTVEEVKLDFDIKVEMEDENQPQEGQGDDRGAVDDDDDDAADVKCEKEQGSDEEYFPSDTWARSPPALPAAPSPPSARKPKSTSCQICNKKLSSKSYLRIHMRTHTGERPFTCYICNRGFITASKMHRHVLTHDESWEGKDGIKPEDGEPDVKSEPDSDEKPLKKKTKKSKAKKANAKIQKTKKTFFEKKQKKFRKWNHFCEFCHQKFLHLETLEVHKKSHEKADSMKCHFCFEPQLDAESLKEHEATHTGPKPYVCTLCGNCYMKRGSMVYHRKTRCKLSENSDKTFICDICKKRYNTHGKLQRHMITHSVAKFTLRYECPVCAHMFHTRYHVQMHLRSHMKEGLILEENRNAVLAMVLQNARKIPKMTDATSHNLTDTAPSDERSRICNICGQIFQHFYYLEEHLKTHGSKIAVQDFDKEEEKKYTCQVCFKSFKLQYYLKLHSYTHTKEKPIICQQCGKGFITKGKLKRHLETHQGLKKYQCHICYKFFTRPGYLRIHVRTIHGTQDYNFRDYGIGVPLGAISRDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-