Celi008806.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crocallis elinguaria
Gene Symbol
PRDM7
Assembly
GCA_907269065.1
Location
OU026073.1:17176435-17183339[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00084 0.065 14.3 1.5 1 23 405 427 405 427 0.97
2 11 0.85 66 4.9 2.1 1 23 433 456 433 456 0.90
3 11 0.00092 0.071 14.2 2.0 1 23 466 488 466 488 0.97
4 11 9.6e-05 0.0074 17.3 0.2 2 23 495 516 494 516 0.97
5 11 4.7e-06 0.00037 21.4 2.2 1 23 522 544 522 544 0.99
6 11 4.7e-06 0.00037 21.4 2.2 1 23 550 572 550 572 0.99
7 11 4.4e-05 0.0034 18.3 2.0 1 23 578 600 578 600 0.99
8 11 4e-07 3.1e-05 24.8 0.6 1 23 606 628 606 628 0.99
9 11 7.7e-06 0.0006 20.7 3.7 1 23 634 656 634 656 0.99
10 11 6.6e-06 0.00051 20.9 3.9 1 23 662 684 662 684 0.99
11 11 0.00086 0.067 14.3 1.5 1 21 690 710 690 711 0.95

Sequence Information

Coding Sequence
ATGGCGTTGAGAACGTTGCGGCAAAAGCCGCGTATCAGTTACTTCGAGCCAGAGGAGCCCAGTTTGGATGAGTATGTGTTTTGCGAAAAGTGTGCTGACTATGTTTACGAATACTGCTCCATTCATGGAGCCTTGCTGGTCATCCCTGACGACAAGGTTCCTGCTAAACCCAATTTCCCATCCTTCGTTCCTCGAGCAGCTCTCACCATCCCCCATGTTTTCCTGCACATCAACTATTCTACTATACCAGGAGCGGGGCTGGGCGTGTTCAGTACACGGACCCTGCCGACCGGCGTGCGGTTCGGGCCGTACCGCGGGGAACGAACTAAGGACATCACTTCAGATTACAGCTGGCAGATATATGACCGGAACAACAAACCATCCCACGTGGTGGACGCATCCGACGGAAACAAATCTAACTGGATGCGATACGTGAACTGCGCGAGACACTGGATCGAACAAAACTTAGTCGCCTACCAGTACCAGGGACAACTGTACTACAGAACCATCAGAATAATACCTCGTTTCACTGAGCTAATGGTGTTCTACGGCAGCGAATATGCAAACCTACTGGATATCGATCTCGGCAAATACAACTCGCCGAGATCTTATGCTCAAAAATTCGGAGCACCTCCACCCAAGAAACCTAAATTTAGTGTGCCGAAAAAGACATCGCAAGCGGTAGTTGAAACGTCTGTGGATAATAGAAACAGCGATAAGTTAGCAATCGCCGATCATACAACGCAACCAAATCCTATTGTACAACAAGCTTCAAAGAAAAAAATCGAAGAAAATAAATCTCAAAATGGAGCATTTGCATCAAAGAAACGTAAAATAGAAGTAGAGAAGAAATCACACCCATTGAATTTCAACGCAAAACCTTTAGGAATAACCAATCAACATGCAGTGGAGCTTGAAAATGAATTAAACAAAACAAAAACCAAGAAAACATCAACAGGAAACAAATCCAGATCTCATAAACGTACTAAAAATGTAGATAAAACAAGTAATTTAGAAACTAAATTATCAACAAATATGACATCAAAAGAAAATGGTATAAATTCTAATACTGATTGCACTAAACTCCTTGACGATAAAGTAACATCAAAGGAGCATAATTTAGGAAAAGAAATCGTTTCACCAATTTCCAAACGAGAAAAAGTTGGTCAAAGAAACCAAAAACCGGACGGAAGTCTTATCGAAGACGTGTATTTTTTTTGTGATGTGTGTAAGTATCAAACCGTTACTAAGGTTCTTTTGGAAAAGCACATGAGGTTCCATGATATAAACCGAAAGTTTGTTTGTGAAACTTGTGCTTACAGATTTGCTTCTAGTGTTAGGTTAGATAGCCACAGGTTTCACAAACATAAAATTAAGATAAGTTCTATGAAAGTACACGAATGTAACATTTGTGATTATACGACATTAAATCAATCCAATTTAAAAATGCATTTGTTAAAACACGCAGGATTGAAATCCGTCTCATGTAAATTATGTAACTATGTAACTGTTTCTGCAGTTGCATTAAAAAGACATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTGTTCGCGAGCAGGTAGCTTAAAAAACCATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTGTTCGCGAGCAGGTAGCTTAAAAAACCATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTGTTCGCTAGCAGGTACCTTAAAAAGACATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTATTCGCAAGCAGGTGACTTAAAAAGACATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTGTTCGCATGCAGGTGACTTAAAAAGACATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTATGCGACTACAAGTGTTCGCGAGCAGATCACTTAAAAATACATTTACGAACACACACTGGAGAAAAACCTTACTCATGCGATGTGTGCGACTACAAGTGTTCGCAAGCAGGTACCTTAAAAAGTCATAAAAGAAGCACCTGA
Protein Sequence
MALRTLRQKPRISYFEPEEPSLDEYVFCEKCADYVYEYCSIHGALLVIPDDKVPAKPNFPSFVPRAALTIPHVFLHINYSTIPGAGLGVFSTRTLPTGVRFGPYRGERTKDITSDYSWQIYDRNNKPSHVVDASDGNKSNWMRYVNCARHWIEQNLVAYQYQGQLYYRTIRIIPRFTELMVFYGSEYANLLDIDLGKYNSPRSYAQKFGAPPPKKPKFSVPKKTSQAVVETSVDNRNSDKLAIADHTTQPNPIVQQASKKKIEENKSQNGAFASKKRKIEVEKKSHPLNFNAKPLGITNQHAVELENELNKTKTKKTSTGNKSRSHKRTKNVDKTSNLETKLSTNMTSKENGINSNTDCTKLLDDKVTSKEHNLGKEIVSPISKREKVGQRNQKPDGSLIEDVYFFCDVCKYQTVTKVLLEKHMRFHDINRKFVCETCAYRFASSVRLDSHRFHKHKIKISSMKVHECNICDYTTLNQSNLKMHLLKHAGLKSVSCKLCNYVTVSAVALKRHLRTHTGEKPYSCDVCDYKCSRAGSLKNHLRTHTGEKPYSCDVCDYKCSRAGSLKNHLRTHTGEKPYSCDVCDYKCSLAGTLKRHLRTHTGEKPYSCDVCDYKYSQAGDLKRHLRTHTGEKPYSCDVCDYKCSHAGDLKRHLRTHTGEKPYSCDVCDYKCSRADHLKIHLRTHTGEKPYSCDVCDYKCSQAGTLKSHKRST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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