Celi009450.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- -
- Assembly
- GCA_907269065.1
- Location
- OU026068.1:5893582-5904534[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.014 1 10.5 0.9 3 23 652 673 651 673 0.90 2 24 2.3 1.8e+02 3.5 1.4 4 23 1023 1044 1021 1044 0.84 3 24 0.051 3.9 8.7 0.6 1 22 1049 1070 1049 1070 0.95 4 24 6.9 5.3e+02 2.0 0.2 1 23 1111 1134 1111 1134 0.89 5 24 0.00059 0.046 14.8 1.0 3 22 1145 1164 1145 1164 0.96 6 24 0.73 57 5.1 0.6 2 23 1172 1194 1171 1194 0.92 7 24 0.028 2.2 9.5 0.5 3 23 1215 1236 1213 1236 0.96 8 24 0.0014 0.11 13.6 0.4 1 23 1242 1265 1242 1265 0.95 9 24 0.14 11 7.4 0.0 1 23 1291 1314 1291 1314 0.90 10 24 0.021 1.6 9.9 3.4 1 23 1319 1341 1319 1341 0.97 11 24 0.019 1.5 10.1 1.0 1 23 1347 1370 1347 1370 0.95 12 24 0.0019 0.14 13.2 1.5 1 23 1383 1405 1383 1405 0.97 13 24 0.00019 0.015 16.3 1.8 1 23 1454 1477 1454 1477 0.97 14 24 0.0052 0.41 11.8 1.7 1 23 1541 1564 1541 1564 0.96 15 24 0.0022 0.17 13.0 1.5 2 23 1590 1612 1589 1612 0.95 16 24 0.095 7.4 7.9 0.1 2 23 1618 1640 1617 1640 0.93 17 24 0.011 0.84 10.8 0.2 1 21 1685 1705 1685 1706 0.95 18 24 0.0014 0.1 13.7 0.6 1 23 1716 1738 1716 1738 0.93 19 24 0.00012 0.0095 16.9 0.3 2 23 1833 1855 1833 1855 0.93 20 24 8.4e-07 6.5e-05 23.8 1.3 3 23 1862 1882 1861 1882 0.98 21 24 0.014 1.1 10.5 0.2 1 23 1902 1924 1902 1925 0.94 22 24 0.23 18 6.7 0.0 1 23 1946 1968 1946 1968 0.98 23 24 0.03 2.3 9.4 0.6 1 23 1974 1997 1974 1997 0.95 24 24 0.00028 0.022 15.8 0.4 1 23 2005 2028 2005 2028 0.96
Sequence Information
- Coding Sequence
- ATGAGTGGGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAAATACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTCCCATCCTCGTCTCAAAAATCAAGGATTGCGTGTCTGTTCAGATAAACGAAAATGACGAACTGCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTCAAGACTGTTTGTGAAAAGACACAAAACAAACTACAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAGATAAAGAGTGAACCATTTTCTGATGAGGTTTATGATGATGGAGTTGTTATTGATGGCTCCTACCCAATTATTGAGAATGTGGCCTCTTCAAGCAAGCTTCAACCTGAAGGCCCACCTATCTTGGCTTCCTTGGGCCTTACACCGAGGAGTGATAAGACATATGTGGATCCACGAATGGACTGGCACCGGGTTCATGCCATAATGGACATGGTACAAGAAAACGATATCATAGACTCACTCCAGTCCACAGAAGAAACTGATATACTGCACCATTCCGATCATGACTCTGAATCAGAAGGGGAACTCCAACCGGACTTGGAAGATGTTTACATTTACTGCGAAGATGGTTACACATGCAAAGACAAAAGCACCATATCAAAAAATCCTCGGATATCGGAAACTGCTAATACAGCTCGTATAAAAGAAGCTAATAAACTGAGAAAACGTAAGGTTGCCGCCGTGAAGCATTGTCCTCGACCTAAAAACGCGTGGCAGCTACTGTTCACAGACGATCTACTCGAGCTCATTGTCACGTCAACCAACGAGAATATCGTCAGACACGGTAAAAGTTATTCAACGGCTACAAATGCTAACGAAATAAGATCACTTATTGGTATTTTGTACCTACACGGAATAATGAGACCGACGTACCAAAACCACAGTGATCTCTGGGACAGCCACTGTGGCATCTCATGCGTAAAAAATGCGATGACCTTGGAACGTTTCAAATTTCTCATACAAAACATGTGCTTCGATGCCGAAAACGATAATACACTGATCCAGTTCGACACAATGAAACGTATACGGAAAGTGTTCGAAATCTTCGCCATGAATTGCAGAACAGCGTTCGAAATGGAAACTGTTTCGGTTGTCGACGAAATCGTTGTGCCAGTTTACGGACCTTGTCCATTTCAATACGCTATTGATAAGAAGCCGCTTAAACGCGGCATCAAAATGGTGTTGCTGATCGACCCGACCAACTTCTATGTAAGCAATCTGGATGTGATAACTGACCCTTACTTTGGGGCCGAGGAGATAGTCAAGAAAATAACACAGCATCTCTTTGGATCTGGAAGAACTATTGTTATGGACAGCTGGTTCTTTTCAAAATCATTAATGAATGTCCTGAAGACTTATGATCTTTTTACAGTATCAGCATTACATCCTCAAAATGAGAAAATACCACCACTGTTTCTCTCTCAGTATCGAAAGAGCCGTACATTCATGTCTGGATTCCTCGATGAAGAACTATCACTGACTTCTTACATAGATTCACAATCCAAGTCTATAAATGTTGTAACAAACGAACCTAAATTCTATAAAAGAGGTCCGAACATAAACCACATTACTGCAGTATCGGTGTACAAGAAAAATCAGTCAGCGGTTGAGGTTCTTGATGTGCTCATGCATTACTACACGACAATGCAGCACACAAATGATTGGACACTTTCATTGTTCTTCACATTGTTAAATATTGCTTCGGTCAACGCCCAGGGGGTGGAGAGCGAAAATAATGAAGAGGAGGATTACGAGGAAGAGGTAAACGAGCCGAAGCCTGTGAAGGTCCCACATATGCCTGAAGTTTCCATCACCGTAATGCGCAACACCGGTGAGACGTTACATGCCCGTCAAGGTATCCAGCAACTGGCCTCAAAGGACTGCCTAATCTGCGGAAGATCCTACAGATACTCTCACAACGCTCGCAGACACGAACTAGCCTCACACAGCTTCGATCGATACACCAACAAAATAACAAACAAAAAATCACACCACTCACGTATGGTATCCAAACTTAGACCGAACCCATTCAATCCTAAATCGAGGCTAATGCCCAACCCCATCAGCCACAAACTGCAATTTATGCCCAAAAATGTTCCCGCCAAAATAATACCACAGAAAGTTATCAACCCACCGAAACCGATTCCTATAAAAACGTCTAAATCGCAACAAAATAACCTACCGTATCCCTTACGCATAAAAGCGCTAAAAGACTTACAGATAAAGAAAAAAGAACCACAGATTTTGAAGACATTGCTCACTTCGAAACCAGAGGTGCTAGTGTCCGAGCCAGAAATATTGAACTCTGGTCCGGAAAGTCCGGAAACGTTAATATCCGAGCCTGAGATCGCCTCCTTCCAAGTAGAAGCTATTCTTTCGGAGCCTAATGACTATGATCAAAATCCAGAAGACGAAGGCGATGTGGAACACCATAATCATAACTATGATACTGTCGATATGGAATCCGATCACGAAATAGAAATTGCCCGTCAACAGGAAAACGAAGGTGAAATTGAAGAAAATAATGAGGAGAATTTGCATCACGAGCAAGAAAACAATGTTGAAGATGGGGAAAAACAAGGGGAAAGTGATAACGAGGTAGACCAAGATACCGGCGATAGCCAGATAAATATGGAGATCGACGAGGGTGTTGATGGTCACATTGACGATGGAGTTAAAGAAGTAGAAGAGAACGAAGAAGCCGAAAATGATGAGCAAGAGATTAATCCTGAGGCTGATGAAAATGAGGAAGACGAAGAAATGCCTACTGCTCCTGTCGTTGAATTAAATGAAGACGTACAGCACAATTCGTCCAGCGAATTGAACGAGGAAGACGAAGAAATTGACGAAACAGGTGATCTCAATGACACTGCTGAAGGGGAACCACTCGAACAGAAAGAACTCGATCCTGATAAAACATACGTTACTAAAGCTCAGAGAGACTTTATTGTTAAGTACCGTAACGTCATCGAACAAATCAATACAAAACGATGCCTTTGCTGCGACAAATCGTATCCGCGCAGGAAAGCGGTCGTTCAACATTTACAGAAAAATGGACACAAAGTTCCTAAACATACTTGTTATAACTGTGTCGTCACATTCACTCACATCGGTGCACTACTCAGCCACATGAGATCTAACTCTTGCACGGATCTATGGAAAATTATCTTCGATACCAAAGGTATTCCTGATGATATGGTCCTTGAAGATGAGCCAAAGATCAAAGTACAATCTAAGGATATCTTCAACGCCCGGTCCTATGCCTGCAGACTTTGTCCAGCCAAATTCCAGTTGAAACAATCTATAATGAAGCATGTATTGGACGTGCACGAAGGCGGCCAGGCTTCTGTACCGCTCGGCTGTGTTCATTGCCGAGCCAGCTTCAAAGACAAATCTTTGCTCAAAAAACATATACGCGTTGGTGAATGCACAGTTTATATCCATTGCGATTTGTGTACGGAACAATTTTCGAACATGCAAGACTTTAGTGATCACGCTTTGTCTGTGCACGCAGATCATTTTGAGAAGTCCGAGAATACAAACAAGTGTATCGATGGACGGGTCACAGACTGTTCTATTTGCGGGAAAAAGAACAGTAACTACTTGAATCTTGTTAAACATTTGAAAATGGTTCACAACGAAGATAGACCCCATTACTGTCAAAATTGCGATGCTAAATTCGAACAGGCTGCTGACCTTAATAATCACATTTATGTGGAGCATTCTGATCAAGCGCTTGGTTTGCAGCCACTCGAACCAGATATGTCTCTCGTAAAAGAAGAAGCGGAGGAGTACCATTATTCGTGTACAGAATGTAACGCGATATTTGAGACTGTTGACGCCTGGACGGATCATCAAGTGGCAGAGCACAATCAAGTTGCCCATCATTGTGACCAGTGCGAGAAAAAATTCTTGCGGCCTTCCGAACTTGCAGAACACAAAAATACCCACTTGAGAGTTAAGTTCTACCCCTGCAATCTATGCCCGAATTCTTACAGCACCCCTCAAAAATTGTCGGACCATGTCCAACAATGTCATCCAGGAGTCGGCTTAAATGCTAATTCTGAAACCGAATTTTTCTGTGATATCTGCATTCGGTCATTTAAAAGCCGACAGGCCTTTTCCAATCACATGCGCATACACGCTAAAGTACCAACTACTAACAGAAAACCAGGTGAACCTAAAGGATTCGATCCGCGCATTATCGGAAAGCCAATCAAACAGTTTACCATGGTCCAACCGGGTTTCGTCAATTTTAAGCCAAATACGAATGTTCCTAACGCACCTTACTCATGTGATATATGTGGTAAAGGCTTCATGCATAAGAAAAACATATGGAAACATAAGAAAGTCTTGCATGCGGATATAATAAACGATAGAAACGATAGCGAGGAGAACACCATGCACGCTTCCACGGAAGATGATGACTACAATCCTGAAGAAAACGGAGCTCTCTCCACACCCCAGTTCGACAGTTTCAATTTCTCTAATTTTACTAATAACAGCACGCCGCTCAAGCCGCAGCAGCCACAGGTAGATGCTATGCCATACTCATGCGAATTGTGTTTCAAACGATTCCCGCTTAGAACCAGTTTGTGGAAGCACAAACGCGCTAAGCACGGAATCGTAAACCCCGGTTCTAGCAGCAGCAATGAGATTTCAACCCAAGGAACGCCAGGAGAAACTGGTCGTTCAAGCTGTACCATTTGTAAAATTACATTTGCGGACAAGAAATCTTACTACCGTCATAGAAAGAATGTACACAAAACAGCTACGCAAATGTGCAAGATCTGCGGTAAACCTCTCAACTCTACTCTGGAACTGTACGAACATCTCAAAGCTGCTCATGCTCGTGAGTTGCTTGGATACAACGCCAATCAAGGCTCGAGTAAATCACAACCAGATGTGTCTCAAGATCTAGATGCTGATTATGATAATGAGCCGGAGTCGGCCGATCCAAGCCTAGACTATCAAGCACGCTATCCATGTGATACCTGCGGAAAACAGTTTGTGGGACTGCTTGCGTTACAAAACCATCAGTGTATAAATCAGCTTCCTCCGCAACCGCAGACTTTCGACTGTGAAATCTGCCACAAAAGCTACACATCAATCGCCGCCCTGAAGAGTCATCGCGGCTGGCACTTGCGCTCTCCAGATGGGAAAGCGGCTGCCAACAACAGCGGTCTTTGGATGCCTCAGCACAAAGTGACGAGTAAGGTCAGCAAACATGAGGTCGTTGACGCGGTGCAATTGGCTCGCGTCTCACATACGACCTCCGCCTCACATTCGGCTCCCGCCGCAGCGGTCACAGCCAAAAGGCGATTGCCACCAGAAGTCGAAGTAACCGTCGTCAACCCGAACAAAAAATTGCGGTCAGACGACTCCGTAGAAATGGAGCAAAACAATGAAGCAGTAGAAGGGAGGTACTGTACAATCTGCGACAAAGAGTTCACGAAGCGCGCCGCTTACCAGCGTCATATGGACGAGGTCCATCAACCAAATTCCGTATTTTGTCCGGTCTGCGACAGAAGTTTCACAAGGAAATCCACGCTTCTCGTGCATATGAAGAAGCATTACGAAAGCGGGGAGGGAAGTAGTACGTCTGTCGCCGCGCAAATGGAAGACGAAGGTTTCGCTTGTGACGTTTGCGGTGCGCAATACGATAGCGAGAAAGCTTTGAGAATTCACCGAGCTAGGCACCACGCCGAAGAGTCAGGTGAATCAGAGGATGAGAGTAACGCTCCCGCGGCACCGCCCGGCGAGTTCACATGCGGCCAATGTGGAGACGGCGTGGCCAGCCCTCGAGACTTGCTCGCTCACCGTTCTATGCACGCAACTCCTACTAAATTCTTTTGCAACATTTGCAAAGTGTATTTCGCGCGAGCACTGGACCTTTCCTCGCACACACGCGCACGACACTCTGACAACGAGAAAGTCTTCTTCCCCTGTGCCATGTGCGACCGCTTCTACATGAACAAGAAGAGTTTACAACGTCACATCGAAATGGCACATTGA
- Protein Sequence
- MSGNYDRVCRLCLSSRGEILPIFPTTSSDDTEPPILVSKIKDCVSVQINENDELPTNVCRKCMDNVNNWHIFKTVCEKTQNKLQSLIKKDGSLLEEVKIKSEPFSDEVYDDGVVIDGSYPIIENVASSSKLQPEGPPILASLGLTPRSDKTYVDPRMDWHRVHAIMDMVQENDIIDSLQSTEETDILHHSDHDSESEGELQPDLEDVYIYCEDGYTCKDKSTISKNPRISETANTARIKEANKLRKRKVAAVKHCPRPKNAWQLLFTDDLLELIVTSTNENIVRHGKSYSTATNANEIRSLIGILYLHGIMRPTYQNHSDLWDSHCGISCVKNAMTLERFKFLIQNMCFDAENDNTLIQFDTMKRIRKVFEIFAMNCRTAFEMETVSVVDEIVVPVYGPCPFQYAIDKKPLKRGIKMVLLIDPTNFYVSNLDVITDPYFGAEEIVKKITQHLFGSGRTIVMDSWFFSKSLMNVLKTYDLFTVSALHPQNEKIPPLFLSQYRKSRTFMSGFLDEELSLTSYIDSQSKSINVVTNEPKFYKRGPNINHITAVSVYKKNQSAVEVLDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESENNEEEDYEEEVNEPKPVKVPHMPEVSITVMRNTGETLHARQGIQQLASKDCLICGRSYRYSHNARRHELASHSFDRYTNKITNKKSHHSRMVSKLRPNPFNPKSRLMPNPISHKLQFMPKNVPAKIIPQKVINPPKPIPIKTSKSQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPNDYDQNPEDEGDVEHHNHNYDTVDMESDHEIEIARQQENEGEIEENNEENLHHEQENNVEDGEKQGESDNEVDQDTGDSQINMEIDEGVDGHIDDGVKEVEENEEAENDEQEINPEADENEEDEEMPTAPVVELNEDVQHNSSSELNEEDEEIDETGDLNDTAEGEPLEQKELDPDKTYVTKAQRDFIVKYRNVIEQINTKRCLCCDKSYPRRKAVVQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNSCTDLWKIIFDTKGIPDDMVLEDEPKIKVQSKDIFNARSYACRLCPAKFQLKQSIMKHVLDVHEGGQASVPLGCVHCRASFKDKSLLKKHIRVGECTVYIHCDLCTEQFSNMQDFSDHALSVHADHFEKSENTNKCIDGRVTDCSICGKKNSNYLNLVKHLKMVHNEDRPHYCQNCDAKFEQAADLNNHIYVEHSDQALGLQPLEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNLCPNSYSTPQKLSDHVQQCHPGVGLNANSETEFFCDICIRSFKSRQAFSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMVQPGFVNFKPNTNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEDDDYNPEENGALSTPQFDSFNFSNFTNNSTPLKPQQPQVDAMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPGSSSSNEISTQGTPGETGRSSCTICKITFADKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQPDVSQDLDADYDNEPESADPSLDYQARYPCDTCGKQFVGLLALQNHQCINQLPPQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDAVQLARVSHTTSASHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVEMEQNNEAVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYESGEGSSTSVAAQMEDEGFACDVCGAQYDSEKALRIHRARHHAEESGESEDESNAPAAPPGEFTCGQCGDGVASPRDLLAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -