Celi012524.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crocallis elinguaria
Gene Symbol
-
Assembly
GCA_907269065.1
Location
OU026076.1:16608467-16616149[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.3 2.6e+02 3.0 1.2 1 23 98 121 98 121 0.86
2 25 0.011 0.85 10.8 4.4 1 23 187 209 187 209 0.97
3 25 0.0003 0.024 15.7 0.9 1 23 213 235 213 235 0.98
4 25 0.0034 0.26 12.4 0.5 1 23 240 263 240 263 0.96
5 25 0.00016 0.013 16.6 1.8 1 23 269 292 269 292 0.98
6 25 0.04 3.1 9.0 1.3 1 23 299 322 299 322 0.95
7 25 0.0012 0.095 13.8 1.5 1 23 328 350 328 350 0.95
8 25 1.4e-06 0.00011 23.0 1.0 1 23 356 378 356 378 0.99
9 25 5.6e-07 4.4e-05 24.3 2.6 1 23 384 406 384 407 0.96
10 25 0.053 4.1 8.7 0.7 1 23 505 527 505 527 0.94
11 25 1.6 1.2e+02 4.0 1.4 3 23 556 577 556 577 0.97
12 25 0.003 0.23 12.6 4.5 1 23 598 620 598 620 0.98
13 25 0.0018 0.14 13.3 0.2 1 23 624 646 624 646 0.94
14 25 0.0011 0.083 14.0 0.4 1 23 651 676 651 676 0.95
15 25 0.0026 0.2 12.8 2.0 1 23 682 705 682 705 0.96
16 25 0.36 28 6.0 0.4 1 11 712 722 712 726 0.90
17 25 1.1 86 4.5 0.6 1 23 843 865 843 865 0.95
18 25 0.14 11 7.4 0.2 3 23 891 912 889 912 0.94
19 25 1 79 4.6 0.1 1 23 936 958 936 958 0.91
20 25 0.0005 0.039 15.0 0.2 1 23 962 984 962 984 0.98
21 25 0.0025 0.19 12.9 1.5 1 23 989 1012 989 1012 0.96
22 25 0.01 0.79 10.9 0.4 2 23 1019 1041 1019 1041 0.93
23 25 0.067 5.2 8.3 6.5 1 23 1048 1071 1048 1071 0.96
24 25 8.7e-05 0.0068 17.4 4.7 2 23 1078 1099 1077 1099 0.96
25 25 1.2e-05 0.00096 20.1 0.5 1 23 1105 1127 1105 1127 0.99

Sequence Information

Coding Sequence
ATGTCTTGTGAATTCGTAGCCGTAGTCCTTATATTTTATATCGAAACTATTCCAATTGGACCTCAAGAACCTACCTACCTATATCGGATATTTTTTTTATTTTTAGGAAGAAAGAAACCTGAAGACTTACTACAGATTAAAAATGAAGTGGAATCAGACTCGGAAAATTTCAGAGTCGCGCTCGTGGCTGCCGCTCAGGATGGCGCTCAGAGGCGAGCAGCTTTCAGGAATAATATAACAACTATCCTCGAGACCTGCACTGCGTTTCCCTTCAAATACAGAAAGGGCACGTATCTATGCTTCTACTGTAAGACCACCTTCCTAGAACCAGAGAAACTTCGCGAGCACAACACCTCGCAGCATTCTGAACCAAAACCTCTAAAGCCGAGAAAGTACGAGCCATTGAAGATGGACTTCTCTAACACGACTTGCAGACTCTGCCGGCTGGACATCAACGATTACGCTACTTTCAAAGCTCATTTGACAGCTGAGCATGGGAAGATCATCGACTGCACGTGGGGAGAGAGCGTCCTGCCGTATAAACTGAGCAAAGAAGACCACCGCTGCCAAATCTGCGGCAAAAGATACGAGATGTTCCTCAGCCTTCACAAGCACATGAATGAACATTACGAGCATTATATATGCGAGACTTGTGGGAAACGATTCGCCACGTCTCAGAGGATGGTCAACCATTCGCGAACTCACGAGAGAGGAGTGTTCCCCTGCAAGCACTGCTCAGATACCTTCCCATCCTACTCTGCTTTATACGCCCATATAGCCAAAGTCCATAAGCTGAACAAGAGGTACAAATGCCCCATTTGCGATGAGAAGTTCGCCTCATACAAGCACAGGTTAAAACACCTGAACATGGTGCACGGAGAGAAGACAGCTATGTTCCCCTGCCCGTCTTGCCCTAAGGTCTTCGATCTCTGCAGTCGAAGAACAGCTCATATAAGGTTTCAGCATCTTCAGGAGCGGAATCACATCTGCTCCGTTTGCGGTATGAAGTTCTTCACGAACTACGAGCTGCAAGAGCATTCGATCAAACATGGCGGGGAGAGGATTTATCAGTGCGATGTGTGCAAGAAGTCTTATGCTAGGTTGAAGACTCTGAGAGAACATATGAGGATCCATAATAACGATAGGAGGTTTGTCTGTCCGGTCTGTGGACAGTCGTTTATTCAGAACTGCAGCTTGAAGCAGCATATGAGAGTGCATCATCCAGCGCAATGGCGCAGCTTAGACTTCGGCTGGGCTACAAAAGGTGGCATGTATTTGTCGTGTAGTGTCGTTGACTCGTTGCCAATGAAGTTGGTGAAGGCATCTGGTCTAGGTAATGATGAGGACCCACCAGAACAGGAAACAGAAGCACCCAGAATTGGTGTCACAGAAACTAAGCCCCTCATCGAAGCCATCAAGACACAAAGCGAGGATATTGCAGCCAGAAAGAAACGGGCCTACACGCTGCTAGAATGTTCTAGAATATGCCCCTTCAGATGGATGAAGAACCTGTACCTCTGCTTTTACTGCGATGAGCAGTTCAAGGATCCTACGATCTTGAGAGAGCATTACTCTAATCATAAATTAATCACTGCGGCACATTTGAAAAACAATATCAGATTGAAAAAATACGAACTGATCAAAGTAGACATAACGGACGTCGGCTGCAAGCTTTGCGACGAACCCATACACAACTTTAACGATCTCAAAATACATCTGCTCAAAAAGCACAACAAAGACATCGACCCGAAATCTGACGGAGTCCTGCCTTTTAGAATAAGTAGAGACAGCTTCAAATGCGCGTTGTGTGATAAAACGTGCGAAGAGTTCAAATCGCTGAATCATCACATGAATGTACATTTCCAGAACTTTATTTGCGAGCAATGCGGCACGGGTTTTGTCACTCCTGACCGATTGAGGGTCCACTCTTTCTCTCACGGGACCGGGGCTTTCAAATGCGACGCCGAAAACTGCGACAAGGTTTTCCGCTCCAAAAACAACAAGAACGAACATTACGCTATTGTTCATATGAAAAGGAAACGGCACCGTTGTCCACAATGCCCCGAGACCTTTATCAACTACTTCCAAAGATCCAAACACATGTCTTCAGTTCACGGTGTTAAGTTGAAAGAGTTCAAGTGTGGTTTGTGCCCTAAAGTTTTCACGCTGAATGGATTCAACACAATACCTGAGTGCAAGCGGCCAAACAGAAGAATAGTGCCGCTATTCCAAGTCGAGTACGATCGCAGCTTATGTAAGCCGCTGGGCACCATCACGGACTTCAGTAAACTGAGGAAAAAAAAGCTCACTGCAGCCCTTGATACTGTAACCTTCATCGTATCCCGCAGCCCTACACCTGACTCACCCGCTAGATCTCTATCGCCGCTCCAACTCGAAGATATAAACCCTCCAGCTGAGTTTCTGCTAAAGCCAGAGCCGAAGAAGAAGTGTTCAGATACGAGACAGAACGCATTGACTACCTTCGAGTTCTCAACCGCTTACCCCTTCATATTCTCTAACAACGCTTTCAAATGTTTCGTCTGCTCCCAATCATATTTAGACCTGATCGTTTTGAAACAACACATGACTGAACACTCATTCGCATCCTTGAAACGATTAGTGAACAATAGAAAGGAAAACGTACTAAAAGTCGATATTAGCGAGCTGGCGTGCAAGCTGTGCTCTCTGCCAATCAAAGATCTGGTCACGCTCAAACGGCATCTGAAAGAATCCCATGCCAAACCAGTCGATCCAGACCTACAGGACAATCTAATACCATTCAACTTGAACTTGATCAATGAAGGGTTCCAATGTGTTATATGCGAGCAGAACTTCATCAAGGTCCGAATATTAGTGATTCATATGAGTGCGCACTTCAGCAACTACAGCTGCGAGATCTGCGGTTCAGGATTCATGACGTTGCGTCTACTGAAGAAGCATTTGGAAGTCCACGAGACGGGGCACTATTCTTGCGACCGCTGCGACAAATACTTCTCCACTAGCTACAAACGCTCGTTACACATACGGGGAGTGCATCTAAAACAGTATCCACGTCGCTGTCCCATGTGCCCTGAGCGCTTCAACTCCAACTACAAAAGAACGATCCATTTGCAGGACGTGCATAACCAATCGACTCGAGTGCACAAGTGCAAGACGTGCGGGCGTGGCTTCAATCTGAAGTACCATTTGATCTGCCACGTGAGGTCGGTGCATTTGCAGGAGAGGAACCAGCAGTGTGACGTGTGCCATCAAAGGTTCTGCAACAAGGAATCTTTGAAGAGGCACATGGTGATCCACACAGGGGAAAAGAATTACAAGTGCGAGATATGCGGAATGGCGTTCTTGAGGCGAAAGAATCTAAAAGATCATTTGAGAATACATGACATTAATTGA
Protein Sequence
MSCEFVAVVLIFYIETIPIGPQEPTYLYRIFFLFLGRKKPEDLLQIKNEVESDSENFRVALVAAAQDGAQRRAAFRNNITTILETCTAFPFKYRKGTYLCFYCKTTFLEPEKLREHNTSQHSEPKPLKPRKYEPLKMDFSNTTCRLCRLDINDYATFKAHLTAEHGKIIDCTWGESVLPYKLSKEDHRCQICGKRYEMFLSLHKHMNEHYEHYICETCGKRFATSQRMVNHSRTHERGVFPCKHCSDTFPSYSALYAHIAKVHKLNKRYKCPICDEKFASYKHRLKHLNMVHGEKTAMFPCPSCPKVFDLCSRRTAHIRFQHLQERNHICSVCGMKFFTNYELQEHSIKHGGERIYQCDVCKKSYARLKTLREHMRIHNNDRRFVCPVCGQSFIQNCSLKQHMRVHHPAQWRSLDFGWATKGGMYLSCSVVDSLPMKLVKASGLGNDEDPPEQETEAPRIGVTETKPLIEAIKTQSEDIAARKKRAYTLLECSRICPFRWMKNLYLCFYCDEQFKDPTILREHYSNHKLITAAHLKNNIRLKKYELIKVDITDVGCKLCDEPIHNFNDLKIHLLKKHNKDIDPKSDGVLPFRISRDSFKCALCDKTCEEFKSLNHHMNVHFQNFICEQCGTGFVTPDRLRVHSFSHGTGAFKCDAENCDKVFRSKNNKNEHYAIVHMKRKRHRCPQCPETFINYFQRSKHMSSVHGVKLKEFKCGLCPKVFTLNGFNTIPECKRPNRRIVPLFQVEYDRSLCKPLGTITDFSKLRKKKLTAALDTVTFIVSRSPTPDSPARSLSPLQLEDINPPAEFLLKPEPKKKCSDTRQNALTTFEFSTAYPFIFSNNAFKCFVCSQSYLDLIVLKQHMTEHSFASLKRLVNNRKENVLKVDISELACKLCSLPIKDLVTLKRHLKESHAKPVDPDLQDNLIPFNLNLINEGFQCVICEQNFIKVRILVIHMSAHFSNYSCEICGSGFMTLRLLKKHLEVHETGHYSCDRCDKYFSTSYKRSLHIRGVHLKQYPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCKTCGRGFNLKYHLICHVRSVHLQERNQQCDVCHQRFCNKESLKRHMVIHTGEKNYKCEICGMAFLRRKNLKDHLRIHDIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-