Celi006534.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crocallis elinguaria
Gene Symbol
-
Assembly
GCA_907269065.1
Location
OU026074.1:1825516-1828497[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.0017 0.13 13.4 2.2 1 23 10 32 10 32 0.99
2 35 2e-05 0.0015 19.5 1.0 2 23 39 60 39 60 0.98
3 35 0.00023 0.018 16.1 2.8 1 23 66 88 66 88 0.98
4 35 2.1e-05 0.0016 19.4 0.5 1 23 94 116 94 116 0.99
5 35 1.4e-05 0.0011 19.9 0.9 1 23 122 144 122 144 0.99
6 35 1.4e-05 0.0011 19.9 0.9 1 23 150 172 150 172 0.99
7 35 1.9e-05 0.0015 19.5 0.6 1 23 178 200 178 200 0.99
8 35 0.0012 0.095 13.8 2.4 1 23 206 228 206 228 0.99
9 35 0.00014 0.011 16.8 1.7 2 23 237 258 236 258 0.97
10 35 3e-06 0.00023 22.0 1.9 1 23 264 286 264 286 0.99
11 35 2e-05 0.0015 19.5 1.0 2 23 293 314 293 314 0.98
12 35 1e-05 0.0008 20.3 3.5 1 23 320 342 320 342 0.98
13 35 0.00023 0.018 16.1 2.8 1 23 348 370 348 370 0.98
14 35 2.1e-05 0.0016 19.4 0.5 1 23 376 398 376 398 0.99
15 35 1.4e-05 0.0011 19.9 0.9 1 23 404 426 404 426 0.99
16 35 1.4e-05 0.0011 19.9 0.9 1 23 432 454 432 454 0.99
17 35 1.5e-05 0.0011 19.9 0.5 1 23 460 482 460 482 0.99
18 35 0.0012 0.095 13.8 2.4 1 23 488 510 488 510 0.99
19 35 4.2e-05 0.0033 18.4 2.0 2 23 519 540 518 540 0.97
20 35 3e-06 0.00023 22.0 1.9 1 23 546 568 546 568 0.99
21 35 2e-05 0.0015 19.5 1.0 2 23 575 596 575 596 0.98
22 35 6e-05 0.0046 17.9 2.2 1 23 602 624 602 624 0.98
23 35 0.00036 0.028 15.5 2.9 1 23 630 652 630 652 0.98
24 35 2.1e-05 0.0016 19.4 0.5 1 23 658 680 658 680 0.99
25 35 0.00037 0.029 15.4 0.6 1 23 686 708 686 708 0.99
26 35 0.00017 0.013 16.5 0.7 1 23 714 736 714 736 0.98
27 35 3.8e-05 0.0029 18.6 0.7 1 23 742 764 742 764 0.99
28 35 0.00012 0.0092 17.0 1.4 1 23 770 792 770 792 0.98
29 35 0.00023 0.018 16.1 2.8 1 23 798 820 798 820 0.98
30 35 2.1e-05 0.0016 19.4 0.5 1 23 826 848 826 848 0.99
31 35 4.8e-05 0.0037 18.2 0.8 1 23 854 876 854 876 0.99
32 35 7.4e-05 0.0058 17.6 0.2 1 23 882 904 882 904 0.98
33 35 3.8e-05 0.0029 18.6 0.7 1 23 910 932 910 932 0.99
34 35 0.00023 0.018 16.1 2.8 1 23 938 960 938 960 0.98
35 35 4.5 3.5e+02 2.6 0.8 1 14 966 979 966 983 0.82

Sequence Information

Coding Sequence
ATGATGAAGCACACTGGAGAGAAACCATATGAATGTACCTTGTGTGATTATAAATCTGTGCGAGCATATCATGTAAAGTTACACTTGAAAACACACACTGGAGAAAAGTCCAATGAATGTAACATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATGAACACATGAAAACACACATTGGAGAAAAGTCCCATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAAGTTTAACGATGCACATGAGGACACACACTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGCATATGCAGGAAGTTTAACGATACACATGAGGACACACCCTGGAGAGAAGCCGTATGAATGCACCATGTGTGATTATAAATCTGTGCGAGCATATCATGTAAAGTTACACTTGAAAACACACACTGGAGAAAAGCCCCATGAATTAAAATGTAACATGTGTGATTATAAATCTGTAAATAAATATTATTTAAAAGAACACATGATGAAGCACACTGGGGAGAAGCCATATGAATGTACTATGTGTGATTATAAATTTGTAAGAAAAGATCGTTTAGAAAGACACTTGAAAACACACACTGGAGAAAAGTACAATGAATGTAACATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATGAACACATGAAAACACACATTGGAGAAAAGCCCCATGAATGTACCATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATAAACACATGAAAACACACATTGGAGAAAAGTCCCATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAAGTTTAACGATGCACATGAGGACACACACTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTAACATGTGTGATTACAAATCTGCATATGCAGGAAGTTTAACGATACACATGAGGACACACCCTGGAGAGAAGCCGTATGAATGCACCATGTGTGATTATAAATCTGTGCGAGCATATCATGTAAAGTTACACTTGAAAACACACACTGGAGAAAAGCCCCATGAATTAAAATGTAACATGTGTGATTATAAATCTGTAAATAAAGATTATTTAAAAAAACACATGATGAAGCACACTGGGGAGAAGCCATATGAATGTACTATGTGTGATTATAAATTTGTAAGAAAAGATCGTTTAGAAAGACACTTGAAAACACACACTGGAGAAAAGTACAATGAATGTAACATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATGAACACATGAAAACACACATTGGAGAAAAGCCCCATGAATGTACCATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATGGACACATGAAAACACACATTGGAGAAAAGTCCCATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAACTTTAACGATGCACATGAGGACACACACTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATCTGCATATGCAGGAAGTGTAACGATGCACATGAGGACACACAGTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAAGTTTAACGATGCACATGAGGGCACACACTGGAGAGAAGTCCTATGAATGTAACATGTGTGATTACAAATCTGTAAGAAAAGGTAGTTTAAATGGACACATGAAAACACACATTCGAAAAAAGCCCCATGAATGTGCCATGTGTGATTACAAATCTGTAAGAAAAGATAATTTAAATGGACACATGAAAACACACATTGGAGAAAAGTCCCATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAAGTTTAACGATGCACATGAGGACACACACTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTGTGCGAGCAGGTGATTTAAAGTTACACATGAGAAAACACACTGGAGAAAAGCCCTATAAATGTACCATGTGTGATTACAAATATGCATATGCAGGAAGTGTAACGATGCACATGAGGACACACAGTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTACAAATCTATTCGAGCAGGTGATTTAAAGTTACACATGAGGGCACACACTGGAGAGAAGCCCTATGAATGTAACATGTGTGATTACAAATCTGTAAGAAAAGGTAGTTTAAATGGACACATGAAAACACACATTGGAGAAAAGTCCCATGAATGTACCATGTGTGATTACAAATCTGTACATGCAGGAAGTTTAACGATGCACATGAGGACACACACTGGAGAGAAGCCGTATGAATGTACCATGTGTGATTATAAAGTTGTAAAAAAATCATTTAGAAAGACACTTGAGAACACACACTGGAGAAAATCCCTATAA
Protein Sequence
MMKHTGEKPYECTLCDYKSVRAYHVKLHLKTHTGEKSNECNMCDYKSVRKDNLNEHMKTHIGEKSHECTMCDYKSVHAGSLTMHMRTHTGEKPYECTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSAYAGSLTIHMRTHPGEKPYECTMCDYKSVRAYHVKLHLKTHTGEKPHELKCNMCDYKSVNKYYLKEHMMKHTGEKPYECTMCDYKFVRKDRLERHLKTHTGEKYNECNMCDYKSVRKDNLNEHMKTHIGEKPHECTMCDYKSVRKDNLNKHMKTHIGEKSHECTMCDYKSVHAGSLTMHMRTHTGEKPYECTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSVRAGDLKLHMRKHTGEKPYKCNMCDYKSAYAGSLTIHMRTHPGEKPYECTMCDYKSVRAYHVKLHLKTHTGEKPHELKCNMCDYKSVNKDYLKKHMMKHTGEKPYECTMCDYKFVRKDRLERHLKTHTGEKYNECNMCDYKSVRKDNLNEHMKTHIGEKPHECTMCDYKSVRKDNLNGHMKTHIGEKSHECTMCDYKSVHAGTLTMHMRTHTGEKPYECTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKSAYAGSVTMHMRTHSGEKPYECTMCDYKSVHAGSLTMHMRAHTGEKSYECNMCDYKSVRKGSLNGHMKTHIRKKPHECAMCDYKSVRKDNLNGHMKTHIGEKSHECTMCDYKSVHAGSLTMHMRTHTGEKPYECTMCDYKSVRAGDLKLHMRKHTGEKPYKCTMCDYKYAYAGSVTMHMRTHSGEKPYECTMCDYKSIRAGDLKLHMRAHTGEKPYECNMCDYKSVRKGSLNGHMKTHIGEKSHECTMCDYKSVHAGSLTMHMRTHTGEKPYECTMCDYKVVKKSFRKTLENTHWRKSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-