Celi020053.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- -
- Assembly
- GCA_907269065.1
- Location
- OU026066.1:26488888-26489727[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-10 1.4e-06 28.6 0.0 1 34 18 51 18 61 0.91 2 2 4.2 7.3e+03 -2.6 0.0 16 25 133 142 130 142 0.80
Sequence Information
- Coding Sequence
- ATGCCGCGTAAATACATTAAAAAAATTCCTTCAAGACATTACAAAAACTATACAGAAGAGACTCTTCGTGAATGCCTGTCAGCTATAGAGAACAAGGATTTGACCCAACGAAAGGCCAGCCAAAAATATGGTATTCCCAGAAGAACTATAATAAACCAACTGCGACTCTTACGTCGAAATGAGAAACCAAAACCGCCAGGAGCACCAACTACATTTACGGTAGAAGAGAAAATATTTGTAGAATGCATTCAAAAACTAAGCGAGAATGGCTTTCCCCTTAATATTTTCGATTTGAGCATGGTGATCAAATCTTATAGAATTGGAAGAAGAGTTTCCAAATTTAAGAACAATTGCCCTGGACTAGAATGGGTGTCCAGTTTTTTGAAAAGGAATGCAGAATTGTCTCAACGGCTTGCTGCTAATATAAAGCGTAGTAGAGCTGGCATTGATCGGGACACCCTCACAGATTACATACATAATTTGTCAGAGGTGGTAAAAGATGTTCTGTCAGAGAATATATGGAACTATGATGAAACAAATTTGTGCGACGATCCTGGGCAAAAAAAGATTCCGACGAGGAGAGGCACCAAATACCCTGAAGTTATAAGAGATACGTCCAAGAGTTCAACATCAATCATGTTTGATGGAAGTGCAGGAGGAGAATTACTTCCGCCATATATCGTATATAGATCTAAACAGCTGTGGAATACGTGGACAGAAAATGGCCCCAAACATGCCCGCTACAATTGTAGTCCTTCCGGTTGGTTTGACATGAATTTATTTAATGACTGGTTCTTCTCACTTGTCCTCCCAAGACTGAAAAAAACAGGAAGGCCCTAA
- Protein Sequence
- MPRKYIKKIPSRHYKNYTEETLRECLSAIENKDLTQRKASQKYGIPRRTIINQLRLLRRNEKPKPPGAPTTFTVEEKIFVECIQKLSENGFPLNIFDLSMVIKSYRIGRRVSKFKNNCPGLEWVSSFLKRNAELSQRLAANIKRSRAGIDRDTLTDYIHNLSEVVKDVLSENIWNYDETNLCDDPGQKKIPTRRGTKYPEVIRDTSKSSTSIMFDGSAGGELLPPYIVYRSKQLWNTWTENGPKHARYNCSPSGWFDMNLFNDWFFSLVLPRLKKTGRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -