Basic Information

Gene Symbol
-
Assembly
GCA_907269065.1
Location
CAJSMC010000003.1:70620-77798[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-15 7.4e-12 46.1 0.0 9 88 230 307 225 308 0.86

Sequence Information

Coding Sequence
ATGCTTAGAGCCGCTAATATCATTAAGCATAAATTACACAACGTACTTAAGTCCACCGATCGATCGGTTTTGGCTCAAGTAATAGGTATTTTGAACGAATGTAACGCGGCTCGAATAGAAGACCGTTTACCCCCAGCACTGCGTGCGACTCCTTCACCTCTCGTGACAGAGACGCAACGAGAAAGCAGAGGAGTAACGGGAGACGATCAACCAAAACGGAAACAATGCAGAGTGGTGTTGAAAGACAGTCAACAGACACCGAGAGAAAGCAGGATAGTTTTGGTAGATTGTCAAGTCAACCAAGGGGTAAATCGAGTCTCACGGATTAGCGACAGTCAACAGCAACAACGGCCCAGTACAAGTCAACGCCTTATGGTTACCGAAGCTGAGGTGTCTCCGGTGAAACGCACTCGGCACATTACCAACCACGAGCGTGAAAGCTCGATCCTGCAGCCAGGTTTCTTAACATCATCTCCGAAATTTTTCCCGACTCCTAAGGAATTTGCTGAAAGCCCGACTAAGTACGCAATGGATTTGTTGCGGAAACACCCAAATACGAGTCTTTGTGGAATAAAACCGCCTGCTAGTTTCAAACCTACGTTTAAAAATGACGGCCAACAGACTATCAAGTTATCGAATCAGTACATACATCGTATGCTGCAACGCTGGGGCCTTGCTACCAGAGATCTGACTGCTATCAGATCAAAACAGGATCCAAAAATACAACGATCTCCACTCTTTGAAGGGTTGGAGATCGATCTTGTCAGACTGTTTCGTACCGTGCAAGAAGAGGGTGGGATAGAAATATTACAGAATGACCGGGAGAAGTGGATTATTGTGGCGAAACGTATGGGCCTCTTGTACTGTAACAAAGGGAGCACCAAATTGGAGAATATATATCTCAAGTATCTCCTCGCGTACAACACGTTAACTAGCACGGAACGTGACGCTGCTCTCGAGGATGTACAGAAGTGCTGGATGGCGCGCGAGGAGAAAGCGGTGTTTCGCGCTGAGAAACCGCTGTGGCGGCAGAAACGCATGATTGAGGGCTTGCCGCTGGCCGATGATGACAGTCCAGACTCGCACATTGAGAAGGTATGCGCGGAGGCCGAGGAGTGCGTCACGCCCGGCCGCACATGCAATGCGGCCGCTTTCAAAAAGGCAGACCAATTTCGCACCGTGGTAGAAACGTTGTGCCCTACTGCGGTACAAAAGAAAGACATTTGGTTGCCCTGTGACATTGTGATGATCCCGCCAGTGATGCTGGAGCAACATGGAGTAAACGTGGAGCGGCACATACAATATGCGGGCGAATACGTCATCATTTACCCGAAGACGTACTGTGCCTGCATTGATACCGGGTTCGTGATCTCCGAAGGGGTGTACTTTGCGCCCTTTTCGTGGATCACGAAAATTGAAAGCGTCTTCATGAACCTGCGTAGTTGCTGCGAGCCGAGTCTCTTTTCCTTGGAAAAGCTTCTGGTCGTGCTTTCGAAAGACCCGCGCACCCCAATCAGCGTGCTGCAGCAAACCCACACCGTGCTGACGTCACTGTTGCAGAAGCCTACGCACACTGACAGGTATCTTAACGCTTCGTCACATCACCATCCCCGTCATTTGCAATCTGTAGCCAGATCCTTGATGGACAGGGCTTACGACCTGTGTGACCCTGAACATTTGGAGGCCGAGGTATCGCACGTTCAGGAGGTTCTGCAGAAAAATGGCTACAGGTTGAATGTTCGGGGACGCCCCAGACGTAAACATACGAAGAGGACTGAAGTCAATAGGCAGCCGGCTTTCTTGCCATATATAAAGGGTGTGACGGACAAGGTGGGAACGGTGCTTAAAAACTATTCCATCAAGACAGTTTTTACTCCACACTCGAAACTGTCACGGCAGGTTGGAACACCGAAGGACATTATTCCCTATCAAACACCTGGCGTATACAAAATCGACTGCAGCTGTGGTAGTTCATACATTGGCCAAACTAAGCGGACTATAGCTGAAAGAGTCAAGGAACATATTGCAGCTGTGAAGAACAATCAGGTTAATAAGTCTGCCATTGCTGAACACCTACTTGAATCGGGTCCTAACCATTGGATTGAGCTCCATGCACCGAAAATCCTCTCCACTGAACGACATTACTACTCTAGGATTGTACGTGAAGCGGTTGAAATTAAGAAATGCACCAATTTCAACCGGGAAGATGGATTCAGATTGCCGGCGTCATGGAATCCAGTGATTGACAAATGTTCGCATCGCGGTTCGTTAAAAAAGGAAAAGCCAGTGGATACAGTTAGTGTGGTGTGTCGTGACAATCTTAAACTTTTATAA
Protein Sequence
MLRAANIIKHKLHNVLKSTDRSVLAQVIGILNECNAARIEDRLPPALRATPSPLVTETQRESRGVTGDDQPKRKQCRVVLKDSQQTPRESRIVLVDCQVNQGVNRVSRISDSQQQQRPSTSQRLMVTEAEVSPVKRTRHITNHERESSILQPGFLTSSPKFFPTPKEFAESPTKYAMDLLRKHPNTSLCGIKPPASFKPTFKNDGQQTIKLSNQYIHRMLQRWGLATRDLTAIRSKQDPKIQRSPLFEGLEIDLVRLFRTVQEEGGIEILQNDREKWIIVAKRMGLLYCNKGSTKLENIYLKYLLAYNTLTSTERDAALEDVQKCWMAREEKAVFRAEKPLWRQKRMIEGLPLADDDSPDSHIEKVCAEAEECVTPGRTCNAAAFKKADQFRTVVETLCPTAVQKKDIWLPCDIVMIPPVMLEQHGVNVERHIQYAGEYVIIYPKTYCACIDTGFVISEGVYFAPFSWITKIESVFMNLRSCCEPSLFSLEKLLVVLSKDPRTPISVLQQTHTVLTSLLQKPTHTDRYLNASSHHHPRHLQSVARSLMDRAYDLCDPEHLEAEVSHVQEVLQKNGYRLNVRGRPRRKHTKRTEVNRQPAFLPYIKGVTDKVGTVLKNYSIKTVFTPHSKLSRQVGTPKDIIPYQTPGVYKIDCSCGSSYIGQTKRTIAERVKEHIAAVKNNQVNKSAIAEHLLESGPNHWIELHAPKILSTERHYYSRIVREAVEIKKCTNFNREDGFRLPASWNPVIDKCSHRGSLKKEKPVDTVSVVCRDNLKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00390163;
90% Identity
iTF_00390163;
80% Identity
-