Cran004933.1
Basic Information
- Insect
- Criorhina ranunculi
- Gene Symbol
- GATA6
- Assembly
- GCA_951813785.1
- Location
- OX638381.1:80519954-80524858[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 6.8e-14 51.5 6.8 1 34 456 488 456 490 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGtcagcaacaacatcaacaacagcaacaacaacagcagaaacctATCGAGCTTATAACTGAAATTAAAACTGAACCAAGTAGTGAGCAAGTACCATCTCGTACACCAACAattgaagaacaacaacaacaacaacaaccacaacaacatcaacaacaacttcaacaggagcatcaacatcaacaacaacttcaacaggagcatcagcatcaacaacaacaacaacagcaacagcaacaacgaaAGGAGAACGCCCTAAATGTATCTAGACTATTGCGTGGCGAATTAATTGATCCATCATCACCACCAATACGAATACAACAAAGACGTATCCTGACAACAGCTGGCACCTTGAGAGAAGCTGACGTTCAAGAAAACGACGCCGATTCGGATTACAACAGTCATCAGCACTCTCCAACGGAATTTGTACAAATGACGCCGCGAACTGAAGAGCCCACCACTGTCTATACATACGAGACAACTCCAACGGCCACGAATTTAATAGCTTGCGACAATCCATCAATCAAAATCGAATCACTTGACAAGGatgcacaacaacaacaacaacagttgcAACAACAAACCGATCAACCATCGTCCAGTTCGGCCACTGTCTTCCCCGAGGCAACTGTAGTCTCAGCGTCAGCCCTACAAAATCATCACAATCAACATCCGCAACATCATACAACCCTGCGGGCATACGAAGATGAACGTTTCGCTGGTTCCATCGAAAACGATAATCAAACTCAAATCATCTATTACGATGCGATCAACAGTGCTACCGTCATTGAGGCTCATAACGAGGGTAAAACTTTTACAAATCTAGGTCCAGCTGGAGGTGGCCTGCCGACTGCAGGCTCTGAATACTCAGTCTCGAGCAATTACAGTCAGAACAGCCCGTACTCGGGTTTGGCACAAACCTACAACATGACCAATGCCAATCCGCTTATGTACAAAACCGATCCGACACTGAATTCGATGCGTCCAAGCAGTCAGTTCCCGATAACGGTGTACGACAACCATGGCGTTTCCGAGAGCCTTTGGCCCAACGCCACCAGCCTGAGCGTTGAGTTCCCCAATATTAACAACTACAATCAGGTGATAACCGATGAGTACGGTTCACTGAACGGTACTCCTTGGGTGACATCTGCCGGAGGCACCACTACAACTGGTACTTTTGATCCAGCCGGAGCTGAATTGAAATGTCAATACTGTGGATCGGTCCTTTTGCGAAAGGACAACGAGTACATTTGTGTGACGTGCTCGTCATCACGTATGCCGCATGTGACCCGTTTACCACCGCGTCAGACCAAACCGAAGACGTCCATTGTGAACAACAATCGACGGAATGGAGTTAGTTGTGCGAATTGTAACACAACATCGACCACATTGTGGCGACGCAACAACGAGAGTCAACCGGTTTGCAATGCCTGTGGATTGTATTACAAGTTGCACAGCATGAATCGGCCGTTAACGATGAGAAAGGAGGGCATCCAAAAGAGGAAACGTAAACCGAAACTGACGAATGGAGCACCGATAAGGAATACCCTACCAAGTATCCCTGTGCTGGCACACCATCAGTTGTATCCATCGCAAGTTCAACAAATTGGACTTTCAATGATCTCAACCAATGATCTACATGACATGTCTAACGCTGGCACCAATGGCACAAATCGCCTCACCATCAGTCACAATGATGTAAATTCACTAAACATCAGTCGACACCATCTAACATCGGACGTACCAATTTCAGCGGCTGAAAATCATTCAGCACAATACAATTGTTGTGAGCCACCATCGCAAAGTCAATCGCCACATTTGCCAAATTCTAGCACATTAAATCGACAAATAACACAAACAGTTCCACCAATAGATGGCGCCAGATCAGCCAATGGCGAGATTACAACCAGCGTCATTACCAGTACTGGAATTCCTGAAAGGTCCTcgaataattaa
- Protein Sequence
- MEGQQQHQQQQQQQQKPIELITEIKTEPSSEQVPSRTPTIEEQQQQQQPQQHQQQLQQEHQHQQQLQQEHQHQQQQQQQQQQRKENALNVSRLLRGELIDPSSPPIRIQQRRILTTAGTLREADVQENDADSDYNSHQHSPTEFVQMTPRTEEPTTVYTYETTPTATNLIACDNPSIKIESLDKDAQQQQQQLQQQTDQPSSSSATVFPEATVVSASALQNHHNQHPQHHTTLRAYEDERFAGSIENDNQTQIIYYDAINSATVIEAHNEGKTFTNLGPAGGGLPTAGSEYSVSSNYSQNSPYSGLAQTYNMTNANPLMYKTDPTLNSMRPSSQFPITVYDNHGVSESLWPNATSLSVEFPNINNYNQVITDEYGSLNGTPWVTSAGGTTTTGTFDPAGAELKCQYCGSVLLRKDNEYICVTCSSSRMPHVTRLPPRQTKPKTSIVNNNRRNGVSCANCNTTSTTLWRRNNESQPVCNACGLYYKLHSMNRPLTMRKEGIQKRKRKPKLTNGAPIRNTLPSIPVLAHHQLYPSQVQQIGLSMISTNDLHDMSNAGTNGTNRLTISHNDVNSLNISRHHLTSDVPISAAENHSAQYNCCEPPSQSQSPHLPNSSTLNRQITQTVPPIDGARSANGEITTSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -