Basic Information

Insect: Criorhina ranunculi
Gene Symbol: ZNF541
Assembly: GCA_951813785.1
Location: OX638381.1:3680785-3693258[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00016 0.016 15.9 0.2 2 23 205 226 204 226 0.97

2 6 1.5e-06 0.00015 22.3 1.5 1 23 232 254 232 254 0.99

3 6 8.7e-05 0.0087 16.8 2.6 1 23 260 284 260 285 0.95

4 6 0.00043 0.043 14.6 0.8 2 23 524 545 523 545 0.97

5 6 0.0035 0.35 11.7 0.7 1 23 1519 1543 1519 1543 0.95

6 6 0.0001 0.01 16.6 0.7 1 23 1577 1599 1577 1599 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00016	0.016	15.9	0.2	2	23	205	226	204	226	0.97
2	6	1.5e-06	0.00015	22.3	1.5	1	23	232	254	232	254	0.99
3	6	8.7e-05	0.0087	16.8	2.6	1	23	260	284	260	285	0.95
4	6	0.00043	0.043	14.6	0.8	2	23	524	545	523	545	0.97
5	6	0.0035	0.35	11.7	0.7	1	23	1519	1543	1519	1543	0.95
6	6	0.0001	0.01	16.6	0.7	1	23	1577	1599	1577	1599	0.98

Sequence Information

Coding Sequence: ATGTGTAGTGCCTCTATGGGTGCCGAAGGATCGGTTACATTACAATTACGAGAAGCTATTCATTCGTCGGATTCGTCATCAGTCGATGGTTGTTCATCTCTAGACAATGCCCTCACAATTGGTTATCCGGATCCGGATATGTTAGCCGATGTTCTAGGTACTCTACAAACTGCATCACTCAACAATAACTTAAACAATAATAACACAATGATTAGTGCCATAACTCTGGAAAGTGTGGATGGTAGTAAACTCAATGATATCGGCTCAACAATCAGCAGCACCCCAAACAATAGTAACAATAACAACGGTGGCCAGAGCAAGAGCAATAGCAACAGTAAGACCAGCAATGGtaaaaccaacaacaataacagcCTTATTAGCTGTAGCAGCAATATATCGCTAAGCAGTCCTATTAGCGGACAAATAATCAGCATCACCGGCAGTAGCAGCGGGAGCAGCGGAAGTAGTAGTAATTGTAGTACAACCAGTAATAGCAgttgtagcagtagcagtaatGAGAGTATATCAAACGTATCAGTTCCTGGATCTAATCCACCGATTGTAAAGAAACAAAGACCCAAAACATCATCCCCCACACGCCATGGACCGCAACAATGTCAGGTTTGCAGTAAAATATTTGGAAATGCATCTGCCTTGGCAAAGCACAAATTAACGCATAGCGATGAGAGGAAGTACGTCTGTGTGATGTGTTCAAAAGCGTTCAAAAGACAGGACCATTTAAATGGCCACATGATGACTCATAGAAATAAGAAACCATACGAATGCAAGGCTGAAGGTTGCGGAAAATCGTACTGTGATGCAAGATCGCTGAGACGGCATACGGAGAATCATCACAGCGGATTGGCGGCGGCTGCAACCACCCCTCAGAATCAATCATCATCCCTATCGCCGTCAACAGGACCTCCGACAGGGCTCAGTTTGTCACCGGCAACGGCCAGTGGAGATGCTAGTTCACCCCACGGAGCAAACTGTGTTCAATACACCACCACAGGAGGCGGCGATGATGGCAGTGGCAGCAACGGTAACAGTTCAGTGAAACAATCGTCGTCAGCTGTGAACGTGTCAGTGGTGTCATCATCCACGCAAGCGAGTTCTTCTTCACAATGTTACTCATCAACGTCTTCACCTGCATCGTCACCTTCGTCGAACACCTCAACAAAAGCGGTTGCCGCGAATGATTTACTCACCAGGCATCAGCTGGATCTCATTAGCCAAATTATGCAACAAACGAAGCAGGGAAACACTCAAGTGACTGTTGCAACCACCACGGCGAGCTTGAAGATAGCAAATCAACCACCGTCACCCCATCATAGCCAGACCCAAAGCCCACAGAGACCAAGGACATGGAACATGCAGACGCAGTTACAGCAAACTCAATCAAAAATCTCATCCGTATCGGTGATTGAAAATTCTACATCACCCATCACATCGATCTCCATCAATGAACTGCTCAACGGAAATGGAAgccatcagcagcagcaacaagtaACGAATGCAGGGATAaatcaacaaattttaaatattgttaaaataGAGCAGAAACCTGTAGAGTGCAACTTATGTCATAGAAAATTTAAGAACGTGCCAGCTCTCAACGGACACATGCGTTTGCATGGTGGATACTTCAAAAAGGAGGCAGAAACAAAAAAGTGCGATCGAAAGGATGGACTAGGTCCGCCCTTACAAACAGCCAGTATTGGTGTCCGGGCTTTGATTGAAGAGAAAATTATTAACAAGCGATGTAAAGATTTGAAGGGTGCCTTTGTAGTTCCTGCCCCACCCATAGCGGCTGCGGTTAGACGCGCGGCTAGTGACCTAGAAAACTTTTTAGCTCCCAAGTCACCTATTGTGCATCAAACAGGGAGCTCACCGTCCGAAAGGAATAACAGTAGCAGCAATAGCCTAGTTGAGACCGGAACCACTGTCCTTCCGCCAGGTCtgcaaattcaaaaacaaacggTCCCAATCCACCAGAAACCAACAAATGTCAGTGTCGGAACGACAACAAACGTTTCCAAGGGTACATCCACAATGGATCATAAAGACGCAACCCTGATAGAGCTGTTAAAGCGTGGCACAAAAGTGGCGGTACGGAAAACAGGTTCCGATTCCAGTCAAATATTCACCACCAGCAGTGGAACGCTTATGCTGCCCTCTGAATTATCACTTACATCATCGGGATCATCGAACCCACCACTTGCGATAACCCTACCGAATGGAGAAACTACACCTGTGTCACTAACGATATCGCAAGCCTCGAATGGTTCCGGCGATGTCTACACACTTACCTATTCAACCGATTCGGCGGCGTCGTTTTTTGAAGACAGCGACGTCTACAGTGTATCTGAGACCGACATGCTCCTGCAAACGGTAGACTCCATACAATTGCTCAATGAGTCTGAAGCAACGGATACAATGGATGAAATAAACTCAATGAGTGTCTACCGGAATGACACCAATTCCCCCTCCAACTTAAGAGAGATCATTAATAGACCTAACAAAGACATGCAAGCGGTTTTCAGTTCCCCTGTACAAGAGGCATTGCCCGATTTCCAAACACTTCATTCCAAGGATTTTGTCCTATACAACAATGGCACATGCAAGACTTTAAGTGGTGGCACCCAGACCGCAACGAAATCGCTCGCCACTGTAGTAAAGCAGTCAATATCTCCTCTCCCATCACCACTGGCGTATCCTACGCCACCAGCAAGCCATGAGACAGTCACACAATCGTCACCATTCCTGGATGACTCCCATCACTTTTCAGATGCAGCAAATTCATTCTTCCAGGAGAAGTCTACAACCGACTTCATTGACGATGCCGGAGGAACCTTCTTTAAGGATTGTTCCAATGAGGCTCTTACTGAAAGTCAAAAAATCCTCAAATTAAAGAGTGTCTTGGAAGACAGTGGGCAATTCTTTAAGTCGAATGATGACAACTCGACTGATGTATTCGACACCTCTGTGGTCAAGGTGGAAGACCTTCTTAACGAGTCAAACGATGGAACTAACTGTGATCTCAAGGACTTTGCAGAACAGAATCTCTCCTTTTTGGATGATGCTCAAGGATTTCTCGATGACTCGCGCAATGCCACGTCACCACTATCAGAATCGTTTTTCACTAGTGGAATCGGAACAGCCGAAGAAGTGAAAGAAGTCCTGCGTGACGTCCTACCTGATGAGTCACTCAATTGTGACCCACAAAATTCAACCGATATTGATTTGTATTATCTTCCCGGCTTGGGCCTGCAATCTCAAATGATGCCAAATTCCGAAGATCCCCTCCTGTCATCCTCACCGAGAGACTTTGGTCACAGATTGCACATACagtcacagcagcagcagtcacAGTTGCTACGCACAGAACAATCAACGGCGTCGGCCGTGCAAGGACAATTGATTCCCAAGAAATCCGATCCAGATTCAAGCTTCCCTATGTTAATGGCCACAAGTACGTCCAGAGATGGAAGCACCCAATTCCATTTCAGCATGCAACAGCAAGACATTAAGCAAGACAACGAAATTGATATTAAGCCAGATTTATCCTCAGTCCAAATGTCTGTAGACACCAACCCAGTAGTGTCGCAACcgctgccgctgccgctgccTCCATCAACGTTCAACGAAAATCCAACTCAGTTGAAAGCATCTCAATTCTTTGTGCCAAGTGAGATCGCCGCCCAACAAAGCCAGCCACAAAATGTTCTATCGGCGGCGGCAACTGCATCTCCGCTCACAAGCTCAATCCTCAAGAGAAGATTGCGCCAAGGGTCCGTCAACGGAGACAGCAGCTCACTCACACAGCCCCGCAAATACGAACTCTACAAGTCGAAACTGCGAAAACCGTCAACCACACACTACACTCCTCAACCCATCTTGAATCCAGAGCGAAAAGGCACGGGTTTGTATTCCAATCTGCCGAAGCCACCCACCTTCCATCAAGACGCCCTGCATTTGGATGATGAATTCGAAGAGGCTGCCAGCTTAATGGCATTCCTCGACGAATCCAAGGTAAACATCGGTACAGCATATCAAGCTACAATTCCAAGTGTCGAGAAAACGTATGATTTACAACCAACTGACGGTCCCGTAGAAGCCACAGATCATGAGGAATTGATGTGGGACCCCAGTGTGGCCACAGATGAAAAGATTCTAACACGCTACATCGAGCTAAGTAAATCTTCAGCCATTCCACTTGGTTACCATTCGGAAGAAGTTGCCCTAAAAGCCTTGCTCCAGGTACACGGAGATACACCCATAGCAGTGCTGAACCTCTTAAAGTCGCAATCGAGTCTCTTCCAGCTGAAGTGGTCTTCCTTGGAAGTGGAAATGTTCCTGAAAGGCTTGGAGAGATACGGAAAGGATTTCTATAGCATTGCTCGTGAGATCATTACCAAGTCGACTAGTGAGTGTATTCAACTTTATTACTTCTGGAAGAAGCTGTGCGTAGACTACAAGGCGACACACCTGAAGATCGAACCTGACGAAATAAATCAATCGCAATTTTCTTCACACACCTCCGAGCTTCGTCCTCATGTGTGTGAGATGCCTGATTGCTCAGCTAGCTTCACATCAAAAGCTGCGCTCCATGGTCACACACGGATCCACTGCATTGGGCGAAATATGCATCAATTGAACAACAATAATGGCTCCATGATGTTTACCAGCAATGGCCAATTACAAACTCATCCAAATCCCAAAGACGATTATCCCTGCAAGGTGTGCGGCAAAGTTTTCAACAAAGTCAAAAGCAGAAGTGCTCATATGAAATCGCATCGTCCTCAGGAAAACGATTCAACCagtcagcagcagcaacaaccaccttcacaaccacaacaacaaaacacaaactcaTCATAA
Protein Sequence: MCSASMGAEGSVTLQLREAIHSSDSSSVDGCSSLDNALTIGYPDPDMLADVLGTLQTASLNNNLNNNNTMISAITLESVDGSKLNDIGSTISSTPNNSNNNNGGQSKSNSNSKTSNGKTNNNNSLISCSSNISLSSPISGQIISITGSSSGSSGSSSNCSTTSNSSCSSSSNESISNVSVPGSNPPIVKKQRPKTSSPTRHGPQQCQVCSKIFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGLAAAATTPQNQSSSLSPSTGPPTGLSLSPATASGDASSPHGANCVQYTTTGGGDDGSGSNGNSSVKQSSSAVNVSVVSSSTQASSSSQCYSSTSSPASSPSSNTSTKAVAANDLLTRHQLDLISQIMQQTKQGNTQVTVATTTASLKIANQPPSPHHSQTQSPQRPRTWNMQTQLQQTQSKISSVSVIENSTSPITSISINELLNGNGSHQQQQQVTNAGINQQILNIVKIEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKEAETKKCDRKDGLGPPLQTASIGVRALIEEKIINKRCKDLKGAFVVPAPPIAAAVRRAASDLENFLAPKSPIVHQTGSSPSERNNSSSNSLVETGTTVLPPGLQIQKQTVPIHQKPTNVSVGTTTNVSKGTSTMDHKDATLIELLKRGTKVAVRKTGSDSSQIFTTSSGTLMLPSELSLTSSGSSNPPLAITLPNGETTPVSLTISQASNGSGDVYTLTYSTDSAASFFEDSDVYSVSETDMLLQTVDSIQLLNESEATDTMDEINSMSVYRNDTNSPSNLREIINRPNKDMQAVFSSPVQEALPDFQTLHSKDFVLYNNGTCKTLSGGTQTATKSLATVVKQSISPLPSPLAYPTPPASHETVTQSSPFLDDSHHFSDAANSFFQEKSTTDFIDDAGGTFFKDCSNEALTESQKILKLKSVLEDSGQFFKSNDDNSTDVFDTSVVKVEDLLNESNDGTNCDLKDFAEQNLSFLDDAQGFLDDSRNATSPLSESFFTSGIGTAEEVKEVLRDVLPDESLNCDPQNSTDIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGHRLHIQSQQQQSQLLRTEQSTASAVQGQLIPKKSDPDSSFPMLMATSTSRDGSTQFHFSMQQQDIKQDNEIDIKPDLSSVQMSVDTNPVVSQPLPLPLPPSTFNENPTQLKASQFFVPSEIAAQQSQPQNVLSAAATASPLTSSILKRRLRQGSVNGDSSSLTQPRKYELYKSKLRKPSTTHYTPQPILNPERKGTGLYSNLPKPPTFHQDALHLDDEFEEAASLMAFLDESKVNIGTAYQATIPSVEKTYDLQPTDGPVEATDHEELMWDPSVATDEKILTRYIELSKSSAIPLGYHSEEVALKALLQVHGDTPIAVLNLLKSQSSLFQLKWSSLEVEMFLKGLERYGKDFYSIAREIITKSTSECIQLYYFWKKLCVDYKATHLKIEPDEINQSQFSSHTSELRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNMHQLNNNNGSMMFTSNGQLQTHPNPKDDYPCKVCGKVFNKVKSRSAHMKSHRPQENDSTSQQQQQPPSQPQQQNTNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522200;
90% Identity: iTF_01542517;
80% Identity: iTF_00389567;