Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_951813785.1
Location
OX638381.1:74366752-74372419[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.54 6.3e+02 0.9 0.1 14 46 228 266 224 266 0.68
2 11 8.5e-09 1e-05 25.9 0.1 1 44 272 316 272 318 0.94
3 11 2.2e-14 2.6e-11 43.8 0.1 2 43 328 373 327 375 0.95
4 11 7.4e-10 8.7e-07 29.3 0.0 2 44 383 426 382 428 0.88
5 11 5.6e-09 6.7e-06 26.4 0.0 3 43 436 482 434 484 0.88
6 11 0.31 3.7e+02 1.6 0.1 11 46 975 1016 973 1016 0.75
7 11 4e-10 4.7e-07 30.1 0.1 1 44 1022 1066 1022 1068 0.94
8 11 2.7e-13 3.2e-10 40.3 0.1 2 43 1078 1123 1077 1124 0.95
9 11 6e-10 7e-07 29.6 0.0 2 44 1133 1176 1132 1178 0.89
10 11 3.2e-15 3.8e-12 46.4 0.3 3 43 1186 1227 1184 1229 0.96
11 11 3.6 4.2e+03 -1.7 0.0 11 21 1349 1360 1348 1361 0.81

Sequence Information

Coding Sequence
ATGGAATATTTAAAAGAAGAATCCAAATACCAAGCCCagaaaagtgaaagtgaatgtGAAACATCCGATACTGAAAAAAGCTACATCaatgaagacgacgacgacgggaaAACTGAAGACACTGACGAAGATGAATGCAACAGCACTGACCATTCGGAGAACTTCGTTTTGGATGGAGTCGATTTTGATTACATGTCTGAGGCAGTGAAATTTCTGGAGTACCATGCTGAAGTCAACACAGATAATGCTCTTGTACTCAATCGCAGATTGCAGGATATGTTGGAAACACTTCGTTGTAAAATTATATCAATGCTTAATAAATGTCGTGAGAAATATATGGAAAATCAGGAAAAGTTAGCCAATCCGACGTCTGATATGTCTTTATTGAGAGGTATCGGTAGTTGCGGAACACCATTTTTTAAGGACGCTTGTGGCAGACCGTGTCCACCGAATGCTGACTACAAACATCGCAGTGAAATTGAGAAGGAGTTGTTTCCAAGTGATTTGGAATTGTATCCACATTTTGTTTGGACAGCGACAGATAAATTGGGTATCTTACAAGGTATTAAAGAACAGgcaATCGAGTATATGGAACGAAGGAGAGCCTATCCATTTCCCATTTTGACCACGAAATCCTCTAAACTGAGTAGAAACGTTAAGCTTCATTCACTTAAGCTTGCAGAATTATTAAAAGAAGTTGATAATGAGTTTACCATTGATTGGAATCAAATATCTGTTTACAATCTGAAGTCTCGACATACGGCGAATAGTTGCTATGCAATTTGGAATGTATATCTCAAACCGGAGATAAATCGCGACGAATGGACTGAAGAAGAAAACATGAAATTGAATATACTTGCAAAGAAGTACAAGTTTCAAGACTGGATTGCCATAGCTTCAGAAATAAAGGGCAGATCGGACTATCAGTGCTTTGTTCAGTACCAGACAGTGGTGTCGATCAAAATGCGAGAAGATAAAGGTGAACGCTGGACGAAGGAAGAGGATGAACTTCTGCTAATGTTGGTAGAAAAACACCGAATGGGCAATGTAATACGCTGGAATCCAATTTGTTCACAACTACCCAACCGAACAAAGAAACAATGCTTTGCACGTTACATGTACAGCATCAATCCAAATATATTAAGAGCGCCATTTACTCCAGAAGAAGACTGCATAATTCTAGCCGCCGTCGAGGAATACGGTGAAAACTTCAATTGCTTCCCAAAAGCGCTGTTTCCCAATCGTACTATCGTTCAAATCCGCAGCAGATACTTCAACTCTATTAAAGTTAACGAAAGCACAAGCAATTGGACACCAGAAGATGATAAATTGCTACTTCATCTAGTAGCTGTAAATGAGTCCGGTATAGCTAGTGGACATGATTGGAAGGGAATCGCGGATGAAATAAAGCGCCACTCTCGTACAAGCTGTCGTACCCGCTTCATGGTAATATCAAAATTTCTGAAAGAAAATCCCAATGCCAACATTAGCGATCTGCCGAGAAAAAATCGTGGTCCTCGGTCTACTGTAACGAAGCGTAATTGGAGGAAAAAAATTGCTGAAATCAGACAAAACCCaagtacaacaacaaaaatcaataagaaAGATTGCTATCGTTTCCGGTTGCGGAACAACGAACTGAAGTGGTACAACTATCTGAAATTCTCCTATGACTTTACATTCGGCAAGAGCTACAGCAAAGTTCCAGACACCTTAAAGAGTCTTGAATTTGTGCGGTGTGCTTTTGGTATACAACTGCAGATGCCTATCGAACTACATAAACCGTATACTACAGGCGTGATACGCGTGACCTTAGATAAACTAGTGCGATTGCATGGTGAAGATAAATCGATGGTCATCGATATGCCTTATATTGGTTATAGGCTTCCTCCGAGTTACTGCACCCTACTTGCCTTCAGAGGGCTTTGCATACAGACAAGGCATGGTATACGACATGTACACCAAGAAAATGGAGCATCTTCTGCGATAGTCGTAAAAGAAGCAGAGGCTGTACAAACTGCTAAAGAAAAGTTTCGACAGCGGCTGATGAGCCTTATCTACAACAGCACTCTTCTCAGCCGTTTGGAACCCGAAGAAGTGgtggaaaaaaatgattttcaaataatattcGATCCAAACACTCAATTTGGTCAACTTGCGAGTCGTAGTTTGGCCGAGCTTAAGGTGGCCCGAATGAACAAGATCGCCAAAAACCTCGACATCGcaacaaaaaaagcaaagagAAAGTCTAAAATGGAGTCAGAAGAAAAATCCAAATATCAAGCCCAGGAACGTGAAAGTGAATGTGAAACATCCGATACCGAGAAAAGCTACATCAAtgaagacgacaacgacgagaAAACTGAAGACACTGACGAAGATGAATGCAACAGCACTGACCATTCGGAGAACTTCGTTTTGGATGGAGTCGATTTTGATTACTTGTCTGAGGCAGTGAAACTTCTGGAGTACCATGCTGAAGTCAACACAGAGAATGCTCTTGTACTCAATCGCAGATTGCAGGATATGTTGGAAACACTTCGTTGTAAAATTATATCAATGCTTAATAAATGTCGTGAGAAATATATGGAAAATCAGGAAAAGTTAGCCAATCCGACGTCTGATATGTCTTTATTGAGAGGTATCGGTAGTTGCGGAACACCATTTTTTAAGGACGCTTGTGGCAGACCGTGTCCACCGAATGCTGACTACAAACATCGCAGTGAAATTGAGAAGGAGTTGTTTCCAAGTGATTTGGAATTGTATCCACATTTTGTTTGGGCACCGACAGATAAATTGGGTATCTTACAGGGTGTCAAGGAACAGGCAATCGAGTATATAGAACGAAAGAAAGCGTACCCATCGACCAGCTCGGCCACAAAATTCTGTAAATTGAGTAATAACGTTAAGCTTCATTCACTAAAGCTTGCAGAATTACTGAAAAAAGTTGATAATGAGTTCACCATTGATTGGAATCAAATATCTGTTTACAATTTGAAGTCTCGACATACGGCGAATAGTTGCTATGCAATTTGGAATGTATATCTCAAACCGGAGATAAATCGCGACGAATGGACTGAAGAAGAAAACATGAAATTGAATATGCTTGCAAAGAAGTACAAGTTTCAAGACTGGATTGCCATAGCTTCAGAAATGAAGGGCAGATCGGACTATCAGTGCTTTGTTCAGTACCAGACAGTGGTGTCGATCAAAATGCGAGAAGATAAAGGTGAACGCTGGACGAAGGAAGAGGATGAACTTCTGCTAATGTTGGTAGGAAAACACCGAATGGGCAATGTAATACGTTGGAACCCAATTTGTTCACAACTACCCAACCGAACAAAGAAACAATGCTTTGCACGTTACAAGTACAGCATCAATCCAAATATATTAAGAGCGCCATTTACTTCAGAGGAAGACTGCATAATTCTAGCCGCCGTCGAGGAATACGGTGAAAACTTCAATTGCTTCCCAAAAGCGCTGTTTCCCAATCGAACTATCGTTCAAATCCGCAACAGATATTACAACTCTATTAAAGTTCGCGAAAGCACCCGCAACTGGACACCAGAAGATGATAAAATTCTTCTTCATTTAGTAGCCAAGCACGGCAGTCATAATTGGAGGAAAATCGCGGATGAAATAAAGCGCCACTCTCGTACAAGCTGTCGTACCCGTTTTTTGGTAATATCaaaatttctaaaagaaaaccCCAATACCAACATTAACGATCTGCCGAGAAAAAATCGTGGTCCTCGGTGTACTGTAACGAAGCGTAATTGGATGAACAAAATCGCAGAAATCAAGCAAAACCCGAGTGCAACAGCCGAAATTAGTAAAAAAGATTGCTACCGTTTTCGGTTGCGGAACAACGAATTGAAGTGGTACAACTATCTGAAATTCTCCTATGACTTTACATTCGGCAAGACCTATAGCAAAGTTCCAGACACCGTAAAGAGTCTTGAATTCGTGCGGAATGTTTTTGATATACAGCTGCAGCTGCCCATCGTACTAAATAAACCGTATACTACAGGCGTGGTGCGCGTGACCTTAGAAAAACTAGTACGATTGCATGGTGAAGATAAATCGATGGTCATCGATATGCCATATGTTGGTTACATGCTTCCTCCGAGTTACTGCACCCTACTTGCCTTTAGAGGGCTTTGCATACAGATAGGGCATGGGGTACGACATGTCCACCAAGAAATTGAAGCATCTTCTGCGATAGTCGTAAAAGAAGCAGAGGCTGTACAAACTGCTAAAGTAAAGTTTCGACAGCGGCTGATGAGTCTTCTCTACAACAGCACTCTTCTTAGCCGTTTGGAACCCGAACACTTGCGTGTCCGTCTTGCCCAAACGAACAACATCGCCAAAAACCTCATCATCGCAACgagaaaagcaaaaagaaaatcgaaagtGGAGTCTACGTCAACACcagccaaaaaaaaactaaaacctgAACCAGaataa
Protein Sequence
MEYLKEESKYQAQKSESECETSDTEKSYINEDDDDGKTEDTDEDECNSTDHSENFVLDGVDFDYMSEAVKFLEYHAEVNTDNALVLNRRLQDMLETLRCKIISMLNKCREKYMENQEKLANPTSDMSLLRGIGSCGTPFFKDACGRPCPPNADYKHRSEIEKELFPSDLELYPHFVWTATDKLGILQGIKEQAIEYMERRRAYPFPILTTKSSKLSRNVKLHSLKLAELLKEVDNEFTIDWNQISVYNLKSRHTANSCYAIWNVYLKPEINRDEWTEEENMKLNILAKKYKFQDWIAIASEIKGRSDYQCFVQYQTVVSIKMREDKGERWTKEEDELLLMLVEKHRMGNVIRWNPICSQLPNRTKKQCFARYMYSINPNILRAPFTPEEDCIILAAVEEYGENFNCFPKALFPNRTIVQIRSRYFNSIKVNESTSNWTPEDDKLLLHLVAVNESGIASGHDWKGIADEIKRHSRTSCRTRFMVISKFLKENPNANISDLPRKNRGPRSTVTKRNWRKKIAEIRQNPSTTTKINKKDCYRFRLRNNELKWYNYLKFSYDFTFGKSYSKVPDTLKSLEFVRCAFGIQLQMPIELHKPYTTGVIRVTLDKLVRLHGEDKSMVIDMPYIGYRLPPSYCTLLAFRGLCIQTRHGIRHVHQENGASSAIVVKEAEAVQTAKEKFRQRLMSLIYNSTLLSRLEPEEVVEKNDFQIIFDPNTQFGQLASRSLAELKVARMNKIAKNLDIATKKAKRKSKMESEEKSKYQAQERESECETSDTEKSYINEDDNDEKTEDTDEDECNSTDHSENFVLDGVDFDYLSEAVKLLEYHAEVNTENALVLNRRLQDMLETLRCKIISMLNKCREKYMENQEKLANPTSDMSLLRGIGSCGTPFFKDACGRPCPPNADYKHRSEIEKELFPSDLELYPHFVWAPTDKLGILQGVKEQAIEYIERKKAYPSTSSATKFCKLSNNVKLHSLKLAELLKKVDNEFTIDWNQISVYNLKSRHTANSCYAIWNVYLKPEINRDEWTEEENMKLNMLAKKYKFQDWIAIASEMKGRSDYQCFVQYQTVVSIKMREDKGERWTKEEDELLLMLVGKHRMGNVIRWNPICSQLPNRTKKQCFARYKYSINPNILRAPFTSEEDCIILAAVEEYGENFNCFPKALFPNRTIVQIRNRYYNSIKVRESTRNWTPEDDKILLHLVAKHGSHNWRKIADEIKRHSRTSCRTRFLVISKFLKENPNTNINDLPRKNRGPRCTVTKRNWMNKIAEIKQNPSATAEISKKDCYRFRLRNNELKWYNYLKFSYDFTFGKTYSKVPDTVKSLEFVRNVFDIQLQLPIVLNKPYTTGVVRVTLEKLVRLHGEDKSMVIDMPYVGYMLPPSYCTLLAFRGLCIQIGHGVRHVHQEIEASSAIVVKEAEAVQTAKVKFRQRLMSLLYNSTLLSRLEPEHLRVRLAQTNNIAKNLIIATRKAKRKSKVESTSTPAKKKLKPEPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-