Basic Information

Insect: Crioceris asparagi
Gene Symbol: -
Assembly: GCA_958507055.1
Location: OY293832.1:34605422-34637489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 2.1 3.3e+02 3.6 2.7 1 21 141 161 141 162 0.94

2 23 0.38 58 5.9 0.3 1 23 184 206 184 206 0.97

3 23 0.0011 0.17 13.9 2.0 1 23 235 257 235 257 0.98

4 23 0.91 1.4e+02 4.7 0.9 1 23 263 286 263 286 0.97

5 23 0.095 15 7.8 0.7 1 23 295 317 295 317 0.97

6 23 0.0054 0.83 11.7 0.1 1 23 347 370 347 370 0.95

7 23 0.026 4.1 9.6 1.4 1 23 375 397 375 397 0.98

8 23 1.3 1.9e+02 4.3 1.0 1 23 404 426 404 426 0.96

9 23 0.24 37 6.5 4.0 1 23 432 455 432 455 0.96

10 23 0.053 8.1 8.6 1.1 1 23 534 556 534 556 0.97

11 23 0.0095 1.5 11.0 2.9 1 23 560 583 560 583 0.98

12 23 0.0025 0.39 12.8 3.1 1 23 675 697 675 697 0.98

13 23 0.089 14 7.9 0.9 1 23 703 726 703 726 0.97

14 23 2 3.1e+02 3.7 0.5 1 23 735 757 735 757 0.97

15 23 0.0052 0.8 11.8 0.3 1 23 787 810 787 810 0.95

16 23 0.034 5.3 9.2 2.4 1 23 815 837 815 837 0.98

17 23 0.84 1.3e+02 4.8 3.8 1 23 844 866 844 866 0.96

18 23 0.24 37 6.5 4.0 1 23 872 895 872 895 0.96

19 23 0.053 8.1 8.6 1.1 1 23 976 998 976 998 0.97

20 23 0.015 2.3 10.4 2.5 1 23 1004 1027 1004 1027 0.96

21 23 0.72 1.1e+02 5.0 3.1 1 23 1111 1133 1111 1133 0.97

22 23 0.17 26 7.1 0.9 1 23 1139 1162 1139 1162 0.97

23 23 0.095 15 7.8 0.7 1 23 1171 1193 1171 1193 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	2.1	3.3e+02	3.6	2.7	1	21	141	161	141	162	0.94
2	23	0.38	58	5.9	0.3	1	23	184	206	184	206	0.97
3	23	0.0011	0.17	13.9	2.0	1	23	235	257	235	257	0.98
4	23	0.91	1.4e+02	4.7	0.9	1	23	263	286	263	286	0.97
5	23	0.095	15	7.8	0.7	1	23	295	317	295	317	0.97
6	23	0.0054	0.83	11.7	0.1	1	23	347	370	347	370	0.95
7	23	0.026	4.1	9.6	1.4	1	23	375	397	375	397	0.98
8	23	1.3	1.9e+02	4.3	1.0	1	23	404	426	404	426	0.96
9	23	0.24	37	6.5	4.0	1	23	432	455	432	455	0.96
10	23	0.053	8.1	8.6	1.1	1	23	534	556	534	556	0.97
11	23	0.0095	1.5	11.0	2.9	1	23	560	583	560	583	0.98
12	23	0.0025	0.39	12.8	3.1	1	23	675	697	675	697	0.98
13	23	0.089	14	7.9	0.9	1	23	703	726	703	726	0.97
14	23	2	3.1e+02	3.7	0.5	1	23	735	757	735	757	0.97
15	23	0.0052	0.8	11.8	0.3	1	23	787	810	787	810	0.95
16	23	0.034	5.3	9.2	2.4	1	23	815	837	815	837	0.98
17	23	0.84	1.3e+02	4.8	3.8	1	23	844	866	844	866	0.96
18	23	0.24	37	6.5	4.0	1	23	872	895	872	895	0.96
19	23	0.053	8.1	8.6	1.1	1	23	976	998	976	998	0.97
20	23	0.015	2.3	10.4	2.5	1	23	1004	1027	1004	1027	0.96
21	23	0.72	1.1e+02	5.0	3.1	1	23	1111	1133	1111	1133	0.97
22	23	0.17	26	7.1	0.9	1	23	1139	1162	1139	1162	0.97
23	23	0.095	15	7.8	0.7	1	23	1171	1193	1171	1193	0.97

Sequence Information

Coding Sequence: ATGGAGACTGGACCCATTCAGATTGATTTATCTGACAACCTGAAAATCCGCCTTGAAAATGAGGACGTAGTTGAGTTTGATAGTTCAAATGGCAATATTCCCGATTCGTATAATTATAAGACATCAGTTTATGTACAGGATGAACTGCCGGACTATAAATTCAATGATTCCATTGACATTACCTATGACTCAGTCGTGgatgataaaattattattttgggaACTGAAATTGATGAAACTGATGAATGTTATCAAGATTTGCAATGCATCGCCAGTTTTGAATTAGACTCAAATCCTGTTTCACACGAGGATAATATGGAGGTTGAAGAAACTGTTGAATTTTTGCAGGATTCACAATCAAACTCCACTTCCAAATCGGACACAAATCCAGATGATAATGTTGAGAAAGCGAATGGGCGGTTTCATTGCAGAAAATGTTCTTTTTCGGCTATGACGGAATCTCAACTCGAACAACACCAATGCGTCCAGCCCGAAGAAGATCAATCAACTCATCAACACGAGACTACTAGTGATAAGGAGATTCAGTGGTATTTCTGCCTAGAATGTGATTATGTAACACAAGATCCTGAGAGTAGCCAAAGGCATCAAGTAACACATTCTCAGAAAGCTGTCAATTCCATTGCTGATAAAATGGAAAAGATAAATAGCAGaATCGCACCAAAAAAACGAATGAAAAAACGTTTCAAATGTGATAAATGTGATTACATGGTATATTACCAATATTTACTGAAGGAGCATCAATTAAAACACACAGAAGACAGGCCCTTTGAGTGCTACAAATGCGAGTACAAGGCCAAGACAGAAAAAAGTGCCCTCAGTCACATGTATACAGTTCATAAGTTATTCGTAGCAAGGAAGTATTTTAGTTGCGGAAAATGCAAATATTCAACTAACGAAGAAAGTAACATTGAGTATCATCTGTTGAGCCATCTTGATCCTAGTGGAATAAATTTACTAGGTTCTGCTGACACAACAGAATCAGCGCAAAATACTTCTAATAGCAGCTTACCTGAAGCTTATAAATGTGATAAATGCTCTTTCGTCGGAAAATCGAAGGCTTTGCTGGAGAACCACATAATTTGGTGGCATAGTGTAAGACCATTCAAATGTGACAAGTGTCCATTCAGggcgaatttgaaaaaaactctcAACGTGCATCTGAAGTCACATaatgataaacataaaatattccGATGCGAAAAGTGTCTTTATAAAGCAAAGGATATGAACGGCTATAGAAAACATCAAGCAGAGCATAAGGAACTTGATATGTTCAATTGCTCTAAATGTTCGTTCCAGACAAACACAGAGAAGTATCTTAGGCGACACTACATTAGATTTCACAAGGAAATACACCAAGAGAGCAAAACTATTGAAAATACCGCCATTTCGATTACACATTTTATAAAGGATGATGAAGAAACTGTTTTAATTAAGCATGAAGCTGCAGCTAGTGAGGATTGCAAAAATGTTATGGAATCTGAAGATGTCAGCAGGAATATTTTGGAAGCAGTCAACCATTCCggtaTATCATCAGAAGAATACCCAGCTGGTACTCTAGAGAAAACTTTGTTTCGTTTCCAATGTGACGAATGTGATTACAAGGCAGTGTATAAATACCAAATAAAGTCTCACAAAGTAACGCACCTGACGCCATTTAAGTGTAGCAATTGTGATTTCCAGATGCGTACAGAAAGAAAGCTTCGCAATCACATGAGGAAAGTTCATAAGTCATTCAGATCAAAATGTTCAACCAAAAACAAGTCTGACATTAAACATCATGTATTGAGCCATCTCGAATCGACAGAAGTGAATGTAACAAATCCATCTGATAATCAGATTTGTTCTGTTGAAAGTGGATTAGAAACAACAcctgataaaaatttcaatccAAATTTGGAGGACACTGTATCTGAAGGAatccattcaaaaataaatgaagcAGAGAATAGTTCTAATAAAAGaAGCGCATCAAGAAAACGAAAAACGTTGAAAAAACGTTTCAAATGTGATAAATGTGATCACATGACACCTTACCAATACTTACTGAAGGAGCATCAATtaaaacacacaaaatacaGGCCCTTTGAGTGTGACAAATGCCAGTTCAAGGGAAAGACAGAAAAAAGTGTCATCAATCACATGTATACAGTTCATAAGTTATTCGTAGTAAGGAAGTATTTTAGTTGCGGAAAATGCAAGTATTTAACTAACGAAGAAAGTAACATTGAGTATCATCTGTTGAGCCATCTTGATCCTAGTGGAATAAATTTCCTAGGTTCTGCTGATACAACAGAATCAGCGCAAAATACTTCTAATAGCAGCTTACCTGAAGCTTATAAATGTGATAAATGCTCTTTCGTCGGAAAATCTAAAGCTTTGCTGAAGAACCACTTAATTTGGTGGCATAGTGTAAGACGATTCAAATGTGAAAAGTGTCCATTCAGGACGAATTTGAAAAACAGTTTCAACGTGCATCTGAAGTCACATAatcataaaaatgaaatattccgATGCAAAAAGTGTCTCTATAAAACAAAGGATTTGAACCGCTTTAGAAAACATCAAGCAGAGCATAAGGAACTTGATATGTTCAATTGCTCTAAATGTTCGTTCCAGACAAACACAGAGAAGTATCTTAGGCGACACTACATTAGATTCCACAAAGAAATATACCAAGAGAGTCAAACTATTGATAACACCGCCATTTCGATtacacatttgataaaggatgATGAAGAGACTGTTTTAATTAAGGATGAAGTAAAGGAAGCAGCAGCTAGTGAGGATTGCAAAAATGTTATGGAATCTGACGATGTCAGCAGGAACATTTTGGAAGCAGTCAACCATTCtggTATATCATCTGAAGAATACCCAGCTAGTACTCTAGATAAAATGTTCCGTTTCCAGTGTGACGAATGTGATTACAAGGCAGTGTATAAGTACCAAATTAAGTCTCACAAAGTAACGCACCGGAAATCGATGTCATTTATGTGTGACAAATGTGGTTTCCAGACGCGTGCGGAAAGAAATCTTCACAAACATATGAAGAATGTTCATAAGTCAGACAATACTGACATTAAACATCTTGAATGGTGCCATCTTGAATCGACCGAAGTGAACGTGACAAATCCATCTGATGATCAGATTTTTTCTGTTGAAAGTGGAGTAGAAACAACACCTGATGAAAATTTCAATCCAAATTTGGAGGACACTGCATCTCAAGGAATACATTCAAAAAGAAATGAAGCAGagaataattctaataaaagAAGCGCATCAACAAAccgaaaaatgttgaaaaaacgtTTTAAATGTGATAAATGTGATTACATGGCATGTTACCAATACATACTGAAGGAGCATAAAATAACACACACAGAATTCAGACCCTTTGAGTGCGACAAATGCGAGTACAAGGCAAAGACAGAAAAAACTTTCCTCGGTCACATGTATACAGTTCATAAGTTATTCGTAGCAAGGAAGTATTTTAGTTGCGGAAAATGCAAATATTCAACTAACGAAGAAAGTAACATTGAGTATCATCTCTTGAGCCATGATGATCCTAGTGGAATAAATTTACTAGGTTCTGCTGATACAACAGAATTAGCGCAAAATACTTCTAATAGCAGAAAAGTACAGTCTAGCTGTGCAAAATTTTTGGGTATGCTCATGGATAGCAGGCTCCTGTGGAAGGAACATTCCCAAAACTTGAAAGACAAACTACACAGTGCGATATATGCGATACGCCGAATTCGACAGATTATCAATCAGGGTGCAGCCTTACAAGCTTATCATGCGTTATTCCACTCAAGAATACTGTATGGTCTGGAAGTCTGGGGGACCTCTGCGCATAGAGAGGATGTGCTTCTCGTGCAAAAGGCAGCAGTCAGAGCCTTGGAAGGTGCTGACGCAAGGACCCATTGCAAACCACTGTTCATAAAGAACAGAATACTTACCATAACAGCAGAGCTGATCATTAAGCTGGTAATCGATACAGTGAGCCACCCGGAATTGTACACAACAAGATCCGAAAGCCAGCCATACAACATTAGAACCAATGACAAAACTAGGCTGGCGGTGAACTCCAGAAGAACACTAGGAGCCGCATTCTACAACAGATTGCCCAGGAGTTGGAGAGGCCTAAGCCAGAAAATGTTAAAGAAAAATCTAAGAAATTAG
Protein Sequence: METGPIQIDLSDNLKIRLENEDVVEFDSSNGNIPDSYNYKTSVYVQDELPDYKFNDSIDITYDSVVDDKIIILGTEIDETDECYQDLQCIASFELDSNPVSHEDNMEVEETVEFLQDSQSNSTSKSDTNPDDNVEKANGRFHCRKCSFSAMTESQLEQHQCVQPEEDQSTHQHETTSDKEIQWYFCLECDYVTQDPESSQRHQVTHSQKAVNSIADKMEKINSRIAPKKRMKKRFKCDKCDYMVYYQYLLKEHQLKHTEDRPFECYKCEYKAKTEKSALSHMYTVHKLFVARKYFSCGKCKYSTNEESNIEYHLLSHLDPSGINLLGSADTTESAQNTSNSSLPEAYKCDKCSFVGKSKALLENHIIWWHSVRPFKCDKCPFRANLKKTLNVHLKSHNDKHKIFRCEKCLYKAKDMNGYRKHQAEHKELDMFNCSKCSFQTNTEKYLRRHYIRFHKEIHQESKTIENTAISITHFIKDDEETVLIKHEAAASEDCKNVMESEDVSRNILEAVNHSGISSEEYPAGTLEKTLFRFQCDECDYKAVYKYQIKSHKVTHLTPFKCSNCDFQMRTERKLRNHMRKVHKSFRSKCSTKNKSDIKHHVLSHLESTEVNVTNPSDNQICSVESGLETTPDKNFNPNLEDTVSEGIHSKINEAENSSNKRSASRKRKTLKKRFKCDKCDHMTPYQYLLKEHQLKHTKYRPFECDKCQFKGKTEKSVINHMYTVHKLFVVRKYFSCGKCKYLTNEESNIEYHLLSHLDPSGINFLGSADTTESAQNTSNSSLPEAYKCDKCSFVGKSKALLKNHLIWWHSVRRFKCEKCPFRTNLKNSFNVHLKSHNHKNEIFRCKKCLYKTKDLNRFRKHQAEHKELDMFNCSKCSFQTNTEKYLRRHYIRFHKEIYQESQTIDNTAISITHLIKDDEETVLIKDEVKEAAASEDCKNVMESDDVSRNILEAVNHSGISSEEYPASTLDKMFRFQCDECDYKAVYKYQIKSHKVTHRKSMSFMCDKCGFQTRAERNLHKHMKNVHKSDNTDIKHLEWCHLESTEVNVTNPSDDQIFSVESGVETTPDENFNPNLEDTASQGIHSKRNEAENNSNKRSASTNRKMLKKRFKCDKCDYMACYQYILKEHKITHTEFRPFECDKCEYKAKTEKTFLGHMYTVHKLFVARKYFSCGKCKYSTNEESNIEYHLLSHDDPSGINLLGSADTTELAQNTSNSRKVQSSCAKFLGMLMDSRLLWKEHSQNLKDKLHSAIYAIRRIRQIINQGAALQAYHALFHSRILYGLEVWGTSAHREDVLLVQKAAVRALEGADARTHCKPLFIKNRILTITAELIIKLVIDTVSHPELYTTRSESQPYNIRTNDKTRLAVNSRRTLGAAFYNRLPRSWRGLSQKMLKKNLRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -