Basic Information

Insect: Crioceris asparagi
Gene Symbol: -
Assembly: GCA_958507055.1
Location: OY293830.1:228957-235919[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.2e-05 0.0064 18.4 0.7 1 23 157 179 157 179 0.95

2 15 0.0019 0.29 13.2 1.2 3 23 187 207 186 207 0.99

3 15 0.0012 0.19 13.8 0.4 1 23 326 348 326 348 0.97

4 15 0.034 5.2 9.2 0.6 1 23 356 379 356 379 0.94

5 15 1.3e-06 0.0002 23.1 3.8 1 23 416 438 416 438 0.98

6 15 0.01 1.5 10.9 0.0 1 23 451 473 451 473 0.95

7 15 0.0022 0.34 13.0 0.2 1 23 479 502 479 502 0.94

8 15 0.081 12 8.0 2.2 2 19 510 527 510 528 0.96

9 15 0.00035 0.055 15.5 3.6 1 23 537 559 537 559 0.97

10 15 0.024 3.7 9.7 0.5 2 23 565 586 564 586 0.97

11 15 1.3e-05 0.0021 19.9 0.4 1 23 594 616 594 616 0.98

12 15 0.0058 0.9 11.6 0.2 3 23 624 644 622 644 0.97

13 15 0.00018 0.028 16.4 0.3 1 23 650 672 650 673 0.95

14 15 0.11 17 7.6 1.8 1 23 687 709 687 709 0.96

15 15 0.00047 0.073 15.1 0.1 1 20 1165 1184 1165 1187 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.2e-05	0.0064	18.4	0.7	1	23	157	179	157	179	0.95
2	15	0.0019	0.29	13.2	1.2	3	23	187	207	186	207	0.99
3	15	0.0012	0.19	13.8	0.4	1	23	326	348	326	348	0.97
4	15	0.034	5.2	9.2	0.6	1	23	356	379	356	379	0.94
5	15	1.3e-06	0.0002	23.1	3.8	1	23	416	438	416	438	0.98
6	15	0.01	1.5	10.9	0.0	1	23	451	473	451	473	0.95
7	15	0.0022	0.34	13.0	0.2	1	23	479	502	479	502	0.94
8	15	0.081	12	8.0	2.2	2	19	510	527	510	528	0.96
9	15	0.00035	0.055	15.5	3.6	1	23	537	559	537	559	0.97
10	15	0.024	3.7	9.7	0.5	2	23	565	586	564	586	0.97
11	15	1.3e-05	0.0021	19.9	0.4	1	23	594	616	594	616	0.98
12	15	0.0058	0.9	11.6	0.2	3	23	624	644	622	644	0.97
13	15	0.00018	0.028	16.4	0.3	1	23	650	672	650	673	0.95
14	15	0.11	17	7.6	1.8	1	23	687	709	687	709	0.96
15	15	0.00047	0.073	15.1	0.1	1	20	1165	1184	1165	1187	0.94

Sequence Information

Coding Sequence: ATGGAGGAACATTTTGGACTCACTTGGGAGGATTCAACAACTGTTGTACAAACagaagagGTAATTTGCGGCATCGAGAATGAAATTCTTCCAGCTGAATCTGAAGAATTCACCGGTGTCGAAGATGGCAATGTAGTCGATGAAGAAGTAattgatcatcatcatcatgtcGAAGATGATGGAGAAGGTGATGCCTCTGTTCTATATTTATCGGATGGTAATATGGTGGTTGTACATGATCAGACACAACATTACAACGATCATCACCAAGACCTATCTGCATCCTCAGATCAGCTGGTCGAATGCCAAGTTGCCTCTGAGGAGATCATCACGGACCAGTGGGTGCAGGAGTGTGCTGAAGAAATTGTTGTAGGGTCTGAGGAAGCAGTCGGAGTCCAAGAAAGTGGCGTGGACGAGTATGAGATTCCTCTACCGACATGTCAAGATGAGTACACAGCCGCCAGACCTTATCCGTGTGACTTTTGCAGTCGACGTTTCCGTAAAAAGGCCAATTTGATGAATCACATGGTGGCCCATCAGACTGACAGACCGCACGGTTGCAACTTATGTGGTGTCAGATACATTAGGAAATGTGATTTAATGAATCATTTGAAAATCCACGCATATATACCTGATGCAGATGGAATGGAGGACGAAGATGGACAACAAACCTTGGATGAGTTTGAAGAAGATAAATCGAAAAAGAAAAGGCAAACAAAGAAGAAAAAGAGAACCACCAAAGTCAAAGAAGAATATGATTCATATGAAGGTGACGATACAGgtGCCTCAAGCTCTAGAAATTACAATTACGTAGATGATGTAAATATGAAAATGTTGGAAGAGATGCCACCCGAACAAGACGTTGATGATGACAATGAAGTTCCCAAATCTGATGAATATTCCAGTTATATGGAACAAGAACACCAACAAGAAGTTGTCGAAGAACGTTATCCAATAACCGATCCACGCAAACCATTCGTATGTCAACACTGTGGTGTGGGTTTTGCACGGGAAAAGGCATTCCTCTCGCATGCCCGACTACATGCCGATGACGGTGACAGCCCGTTTGAGTGTCAAAAGTGTGGTGAAATGTTTTGGGATCATGCTCAAATGCGGGCGCACGCCAAAGAGAAACATGGTGGCGATGATCATCATCAACGTGTGGTAGATGAAGATTTCGAAGAGGATGTCGATGATGATGACGAGGATGCCGATTATTCTGAGGAAGAGACCAAATATGGGACGTTTTACTGCTCGACGTGCGGTTTGTCCTTTCATAGACAAGACAATTTGCGTCGCCATCAGAGGGTGCACGTCAAAGAAGAGTTTGTCAATGAACACGAGTTTGGACATGTGTGCAATGTGTGCGGTGAATCGTTCCAGGAGGCCTTAGATCTGTTGGCACATGCCGAAGTGCATGCCCGTAGTGTGGAGCACAGATGTATGATTTGTGGAGAGAGTTTTCAGGATGAAAATTCCCTAGCTGTACATGTACAGGCTAAACATGGCAAAACCTTGCCACCAAACACTTGCATGTTGTGTGGTCGAACTTGCAAAGATCGAAAGACACTCTTGAAACATTCATGGGAGCATTCGAAGGAGAAAATGTTTGCTTGTAGTAAATGCGCCAAAACTTTTCACAACAAAGCCAGATTGAAACGGCACATGCTATCGCAtagAAATAAAGTTGTACAATGTGACGTGTGTAGCGAAGAATTCCCTGATGGTAGATCACTGATGAATCACCGCCATAGTCATAGTAGTGTTTCGGGCAGACAATTCCCTTGCAGAGAGTGTGGGAAAACTTTCGGGTCGAGAAGTTCACAACAGATACATATTAGGATACATACAGGTGAAAGACCATACGGATGCCGTTTCTGTTGGAAAGCCTTTGCCGATGGTGGTACATTGAGGAAACATGAACGCATCCATACAGGTGAGAAACCCTATGCATGCGCCGTCTGTCCAAGGGCATTCAATCAACGTGTCGTGCTCAGAGAACATATTCGATCCCACCATTCTGGACCTGATCCGAAATATTGCAACAGCATGACGCCCTATTGCTGTTCAGTGTGCTCAGATATGTTTGCCACATCTCAAGATTTGATACTACATTTGATACATCATTGCGATTTGAATACAGCAATGAAACGACAACCGCAGATTGGACCTAGGAAATACAAACGTCGAAGAAAATTGAAGCCACACGAGCTCGAATTGATTTCGACTCATAATGAAGATGATGTCATTGATCAGATGGAGAATCCACTGAGTAATACACTCAGCGAGTCTGAAGAGGACAGAGGGGAGCGGAAAAGGAAGTATACGAGAAGGCAAGGGAAGAAGGGATCCACCACTTCACCAAAAGAACCACAACAACCAACAACAGCAATAACAAATGAAATGGAAGAGGATCCATTCATGGATCAATACAACAGTAGCACTGTATCAGCTGCTGTAGAAAGCATCACCACTAGCACCGCGAATAGTTACCAACAAGTTACAAAATTGACATCGTCACCGAGCAAAACTGGCAAAATGAAAAGAACGAAAAACAACGATcaacaaacatcatcatcagCAATGCCGAGCAGACCGAAAATGATACACACACAAAAAACACGCATACCCATCGAGACAGGCGAAGATGGTCGGGTGAGACACAAGACCAGAACACTCATCACCCGAACTCAGCCAGCTGAAATTAAATCAGTCACCGGTGAGCGCATCCGACCACGTACAAAAAATGTCAGCTATCACATTCTGCAAGCTGACAAGCTACCATTGGCCACATTTCCTTCCACGGCCACACTGATGGCGATGTCAGACGATCAGCAGGCTGTGGCAGCTTTGCTCAAAGAAGAGGAGCACCTCAACAATGTCGCCGGCAATGAACTAATCATTGATCATGATCATAATCTATCAACAGCTACGACAACACATTATAATGGTTGTTCGTATGAGGAAACGCCACCGGAAGTCGCATCCGAGCAGATAATCGAGTGCgaagcagaagaagaagaagacgagaTAGACATGATGGAAGAAACAACGACAGCGTTTGTTGAGATGGAACAACAAAAACCGATGACGACACGACGAAGAACATCGACAACACGAACGAGGAGCACAAGTGGCGGCAGTGGTGGAAGCAAAGCTATGAAGAATGTCATCATTGGGCCTGGCAGTAAGGTGAGGCTGATCAAGGAAGGTATGTTAGTCTCTAAAGCCAGAACGACATCATCGTCTTCACGAAAATCTGAAGAAATGGTGGTTGAAGAGCATCCCGAATGCATCCTTCCTGATTACATCGAACCCGAACACATGGTTATCAAAGAGGAGATTGTCAATCATCACCACCATAATACATCATCATCATTTCCAGCTACAGTGAAACAGGAAATTCTCGATCCGAGTCCGCTACATGAATTGGCCGAAATATCCATGCAACATGCCAATGCTGCTGCGGCTGCTGCCAATACCCAAAATTTGTACAAATGCGAAATGTGCAGTGAAGTTTTTAGCGATAGGGCGCAATTGCTCGTACATGTTCCCATACATATTTGA
Protein Sequence: MEEHFGLTWEDSTTVVQTEEVICGIENEILPAESEEFTGVEDGNVVDEEVIDHHHHVEDDGEGDASVLYLSDGNMVVVHDQTQHYNDHHQDLSASSDQLVECQVASEEIITDQWVQECAEEIVVGSEEAVGVQESGVDEYEIPLPTCQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPDADGMEDEDGQQTLDEFEEDKSKKKRQTKKKKRTTKVKEEYDSYEGDDTGASSSRNYNYVDDVNMKMLEEMPPEQDVDDDNEVPKSDEYSSYMEQEHQQEVVEERYPITDPRKPFVCQHCGVGFAREKAFLSHARLHADDGDSPFECQKCGEMFWDHAQMRAHAKEKHGGDDHHQRVVDEDFEEDVDDDDEDADYSEEETKYGTFYCSTCGLSFHRQDNLRRHQRVHVKEEFVNEHEFGHVCNVCGESFQEALDLLAHAEVHARSVEHRCMICGESFQDENSLAVHVQAKHGKTLPPNTCMLCGRTCKDRKTLLKHSWEHSKEKMFACSKCAKTFHNKARLKRHMLSHRNKVVQCDVCSEEFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYCNSMTPYCCSVCSDMFATSQDLILHLIHHCDLNTAMKRQPQIGPRKYKRRRKLKPHELELISTHNEDDVIDQMENPLSNTLSESEEDRGERKRKYTRRQGKKGSTTSPKEPQQPTTAITNEMEEDPFMDQYNSSTVSAAVESITTSTANSYQQVTKLTSSPSKTGKMKRTKNNDQQTSSSAMPSRPKMIHTQKTRIPIETGEDGRVRHKTRTLITRTQPAEIKSVTGERIRPRTKNVSYHILQADKLPLATFPSTATLMAMSDDQQAVAALLKEEEHLNNVAGNELIIDHDHNLSTATTTHYNGCSYEETPPEVASEQIIECEAEEEEDEIDMMEETTTAFVEMEQQKPMTTRRRTSTTRTRSTSGGSGGSKAMKNVIIGPGSKVRLIKEGMLVSKARTTSSSSRKSEEMVVEEHPECILPDYIEPEHMVIKEEIVNHHHHNTSSSFPATVKQEILDPSPLHELAEISMQHANAAAAAANTQNLYKCEMCSEVFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -