Basic Information

Insect: Crioceris asparagi
Gene Symbol: -
Assembly: GCA_958507055.1
Location: OY293828.1:86616818-86639077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.026 4.1 9.6 5.8 1 23 96 119 96 119 0.93

2 23 2.1 3.3e+02 3.6 0.7 5 23 126 145 120 145 0.70

3 23 0.017 2.6 10.2 4.8 2 23 153 174 152 174 0.97

4 23 8.2e-06 0.0013 20.6 2.7 1 23 180 202 180 202 0.98

5 23 0.02 3.2 9.9 0.2 2 23 272 294 271 294 0.95

6 23 0.00014 0.022 16.7 0.7 1 23 439 461 439 461 0.98

7 23 0.0021 0.33 13.0 0.6 2 23 467 489 466 489 0.92

8 23 0.0004 0.062 15.3 1.0 1 23 495 518 495 518 0.97

9 23 0.00014 0.021 16.8 0.4 1 23 524 547 524 547 0.98

10 23 0.081 12 8.0 0.1 1 23 552 574 552 574 0.93

11 23 0.016 2.4 10.3 4.7 1 23 583 605 583 605 0.99

12 23 4e-06 0.00061 21.6 0.8 1 23 613 635 613 635 0.99

13 23 4.4e-05 0.0068 18.3 1.8 1 23 641 663 641 663 0.99

14 23 2.7e-05 0.0041 19.0 2.2 1 23 669 691 669 691 0.98

15 23 0.00011 0.018 17.0 0.9 1 23 741 763 741 763 0.98

16 23 0.079 12 8.1 4.1 2 23 769 791 768 791 0.92

17 23 8.4e-05 0.013 17.4 2.4 1 23 797 820 797 820 0.96

18 23 0.00031 0.047 15.7 0.4 1 23 826 849 826 849 0.98

19 23 0.047 7.3 8.8 0.1 1 23 854 876 854 876 0.93

20 23 0.00012 0.018 17.0 1.0 1 23 885 907 885 907 0.99

21 23 2.3e-07 3.6e-05 25.5 0.3 1 23 915 937 915 937 0.99

22 23 3.8e-06 0.00059 21.6 3.0 1 23 943 965 943 965 0.99

23 23 0.00038 0.059 15.4 1.9 1 23 971 993 971 993 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.026	4.1	9.6	5.8	1	23	96	119	96	119	0.93
2	23	2.1	3.3e+02	3.6	0.7	5	23	126	145	120	145	0.70
3	23	0.017	2.6	10.2	4.8	2	23	153	174	152	174	0.97
4	23	8.2e-06	0.0013	20.6	2.7	1	23	180	202	180	202	0.98
5	23	0.02	3.2	9.9	0.2	2	23	272	294	271	294	0.95
6	23	0.00014	0.022	16.7	0.7	1	23	439	461	439	461	0.98
7	23	0.0021	0.33	13.0	0.6	2	23	467	489	466	489	0.92
8	23	0.0004	0.062	15.3	1.0	1	23	495	518	495	518	0.97
9	23	0.00014	0.021	16.8	0.4	1	23	524	547	524	547	0.98
10	23	0.081	12	8.0	0.1	1	23	552	574	552	574	0.93
11	23	0.016	2.4	10.3	4.7	1	23	583	605	583	605	0.99
12	23	4e-06	0.00061	21.6	0.8	1	23	613	635	613	635	0.99
13	23	4.4e-05	0.0068	18.3	1.8	1	23	641	663	641	663	0.99
14	23	2.7e-05	0.0041	19.0	2.2	1	23	669	691	669	691	0.98
15	23	0.00011	0.018	17.0	0.9	1	23	741	763	741	763	0.98
16	23	0.079	12	8.1	4.1	2	23	769	791	768	791	0.92
17	23	8.4e-05	0.013	17.4	2.4	1	23	797	820	797	820	0.96
18	23	0.00031	0.047	15.7	0.4	1	23	826	849	826	849	0.98
19	23	0.047	7.3	8.8	0.1	1	23	854	876	854	876	0.93
20	23	0.00012	0.018	17.0	1.0	1	23	885	907	885	907	0.99
21	23	2.3e-07	3.6e-05	25.5	0.3	1	23	915	937	915	937	0.99
22	23	3.8e-06	0.00059	21.6	3.0	1	23	943	965	943	965	0.99
23	23	0.00038	0.059	15.4	1.9	1	23	971	993	971	993	0.98

Sequence Information

Coding Sequence: ATGGTATTTCTTTTGTTACAGATTGAAGATGAAAGTGACGATAGCGATGGAGATGATAATGATCCATCATTTGTTGATATTCCATCTACAAGTGCTGATGATCAGCCCGGCCCATCTGGTGTTGGAAAGGACAGCTCAGATGCACCtgcTAGATTAGATGCAGTTTCTGATTCAAAACCCACTGGTGAAAAGAATGTTTCGAAAGAAGACGATCAAAAACAATACATCCCACTCTCAAATGGTCACAATGTTTCAACATTAAACAAGTCATTCATTAATGTGATATTTCGATGTAGGAAATGTGATATCAGCTTCGAAAAACGAAGTCTATACAGAAAACACAGATACCATCAACACCATGACTGCTACAAAGTTCTATGTCCAGAATGTGGCATTACTGTTGTTAATCTGTCACAACATGTCAGATCAGTACATGGGAATCCTGTGAAACGGGTGAAATGCCCACAATGTGACATGACTTTCTCGTGCACCAAACATCTCAACCGTCATCGATTGGTCCACAGTAATGAGTACAAACACAAATGTCCGTCGTGTGATAAGGGTTTCAAGACACCATTCTCCTTGCGAGTACATCGAAGGTCGCACGATAAAATTAAACCGTTTCAATGTCCGGCATATCTGAAGGTCTATtgcaaaaaatgcaaacaatTTGTCCGATACGAAGAGGACACTATACATTGCGACATAACGTATTCATGTGCCAAATGTAAAAGGATATTACAGACAAACCATCTGGCACACCAATGTCTGCATGATAAATTATCACAAGATAATGCATCGAAATTGCGAAAGGAATGTGGAATTTGTGAGAAAATATTCTTCTCATCTGTCGATATGGACAGTCATATCAGAGAGAAACATTCCTCAAAGATGGCCAATTGGTGTAAATGTTGTcagttatttttcaaaagtgcCAAAAAATTTGTCAGTCATATAACTGAACAACATAGTTTTACAAGCAGTGATGCTGTAGTTGCTGAGAATGAAAGTGGCTACAAGAAATTACACGATGCAGATGACAAGTGGCATAAAAAACCGAAAAAAACGACCAGTGgatctaaaaaaaaatcggcCAAAAACATATCCAAAAAGAAAACACGAAATGTATCAACAAATGCATGCGGTAAATGTGGTAAAGCTATTCGATCGTTATCAACTCGAAATAGTTTGAAATGTGTATGCAAAGATATCAAACAAGAGCTAATTGAAATTGACCAAAAACCAGCGGTTGAATCAACTCAAAGTAATCAACCTAACACCAAAaggaaattaaaatacaaatctcTCAAGAAGTACGAATGTACCATTTGCTCCAAAGAATTCCCAAATAGCAAACGTCTCAATGGACATCTAAGAAACCACAAAGAGCGAAACATTTCCTGTGATATGTGCGACAGGAAATTCGTCTATCAAAATCAAATGCAAAAACACAAACTCGAAGTACATTTGGCGAGCTATACATACGAATGTGAATTGTGTAGCAGTACATTCAAATCGAAACCATCACTCAATCAACACCtacaaaaaatgcatattaaAATGTACAAATTCCAATGTGATAAATGCGACAAGGGTTTCTTTGTGCGACCAGACTTTGAGCGTCACGTACGTGTCGTCCACGAACAGTTCCGATACTATTGCGAATCATGTGGCAAACCATTTCTAACCGAACAAGGTTTGAAGATCCATGCCGTCATTCATGACCCAACAGCTGTTAGACAAACGTACAAATGCACTGTTTGTCCAGATACTTTTGTGGCAAAACACCGACTGAATCACCACATGAAAAAACACGAAGCCAACGGTGGAGAAGTCTACGTGTGCGAACACTGCGGCAAAGGCTTCACATACACAATTGGTCTGAAATTGCACATGCGTGTTCATAGTGGTGAGAAGCCGTACAAGTGTGACACGTGTGACAAGACTTTCCGCGCCACTAATACCTTGAAGATTCACAGAAGGATCCATACGGATGAGAAGCCGTACGTGTGCCAATTCTGTGATAAAAGGTTCAGACAGAGACCGCCACTGAAGAAACACCTGAGATATCATACGGGCGAGAAACCGTATCGaaaaaCCAACGTATCATTAGACAGCAAACTAAATGCTATagataatgaacaaaaaccACTACTTGAAACAACTCAAAGTAACGAACCTAACATCAAAGTGGAAACAAAAAACACACATCCAATGAAGTACGAATGTAATGTATGTGCCAAACAATTCCCAAATAGCAAACGTCTCAAATCACATATAAGAAACCACAAGGAGCGAAATATTTCCTGCGATATGTGCCACAAGAAATTCATCTATCAACACcgaatgcagaaacataaactCGAAGTACATCTGGCCAGCTATACACATGAATGCGATCTGTGTGGCACTTCATTTAAAACGAAATTAACACTAAAGCAACACATACAAAATACGCATATcaaaatatacaactatcaatGTGACAAATGCGACAAGGGTTTCTTTCTACGACCAGACTATGAGCGCCATGTGCGTGTCGTTCACGAACAGTACCGTTACTATTGCGAATCATGTGGCAAACCATTTCTCACCGAACAAGGTTTGAAGAATCATGCCATCGCTCATGACCCTGCAGCCATTAGAAAAACGTACCAATGTCCAATTTGTCCAGCCAGTTATGTAGCAAAATATCGACTAAATCACCACATGAAAAAACACGAAGCCAACGGTGGAGAAGTCTACGTGTGCGAACACTGTGGCAAGGGATTCACATACCCTGCCGGTCTGAAGTTGCACATGCGTGTTCATAGTGGTGAGAAGCCGTACAAGTGTGACACGTGTGGCAAACATTTTCGTACCAGTGGTGTCCTGAAGACGCATCAAAGAATCCATACCGATGAGAAGCCGTACGTGTGCCATTTCTGTGATAAACGATTCAGGCAAGGTCCGCCATTGAAGATACACCTGAGATATCATACTGGCGAGAAGCCGTATCGagaaTTTTTAATGTTAGAGTTCTCCCCTAAGAAAAAACGGGGCAATTGGTCTGAAGATGCTCTCAAGTTAGCTATGGATGCCGTAAATAGAAAAGAGATGTCAGTACGAGCGGCTGCGCTAAGATACAAAATACCGCGACGAACTTTAAAGAATCATCTTGCTACAGGAAGTTACAGAAAAAAACTCGGTAGAAGTTGTACGTTGACTGAAGATCTTGAAAAAGATTTAGCCAATAAAATAGTTAGATTTGCGAATATAGGTATACCTTTAACTCCAAAAATAATAAGCAAACAAGCTTATGCGTTCTGTAAAGCCAGTAATATCCAAAATCGTTTCAATGAAGCAAGAGGGTCAGCTGGTAGAAAATGGTTGAAAAATTTCCTGAATCGTCACCCAGCAGTATCTAAACGCAAAGTGCATGTTATGAACCCTGCACGTACGCAAAAACTCAACAAACCCATGGTTAGTCAATACTTTGAGGCTATAAAAGAGATTTATGACCATCTGGACATATCAAACCACCCAGAACGGCTTTATAATGTTGACGAGAAAGTATTCTGTTTGACCTTGCAACATGATCAGCAAGTGCTTACCCAAAAAGGAGCACGAATAGTTAATTTAGTAGCCCCAGAACATGCAGACAATGTTACTGTAACGACATGTGTCAACGCAATGGGTGATGCCATACCTCCTATGATCATCTTTAAAGGGAAAAGATCAAGAGCCGAGTTCACAGAGAACCTGCTCCTTGGCAGCTCAGTAAAAATGGCGCCAACAGGCAGAATGACAACAGATCTATTTATCGAGTTCATTCAACATTTAGCTAAATACAAAACCCACGGAAAATGTCTTCTAGTTTTTGACGGTGCATGCTCAAATTTAGATTATGGCATTGTGGATGTCGCAGAAGAAAATGACATAATTCTTTATTGTTTGCCATTTAATGCAACTCAAGAGCTGCAGCCCTTGGATAAATCAGTCAATAAATCCTTTGAACATCACTGGGACGAGGAGGTTCTGGTGTATACCAACCAACATCCAGATAAGAAGATCACAAAAGTTCGCTTCAatgaaatattaacaaaaatttggCCTAAATGTGTGACAATCAGTAATATTATTCACGGGTTTAAAGTAACTGGACTCTTCCCATGGGATCCTAATGTGATTCCAGAAGAGGCTTATATGCACCTTCGATTCTaa
Protein Sequence: MVFLLLQIEDESDDSDGDDNDPSFVDIPSTSADDQPGPSGVGKDSSDAPARLDAVSDSKPTGEKNVSKEDDQKQYIPLSNGHNVSTLNKSFINVIFRCRKCDISFEKRSLYRKHRYHQHHDCYKVLCPECGITVVNLSQHVRSVHGNPVKRVKCPQCDMTFSCTKHLNRHRLVHSNEYKHKCPSCDKGFKTPFSLRVHRRSHDKIKPFQCPAYLKVYCKKCKQFVRYEEDTIHCDITYSCAKCKRILQTNHLAHQCLHDKLSQDNASKLRKECGICEKIFFSSVDMDSHIREKHSSKMANWCKCCQLFFKSAKKFVSHITEQHSFTSSDAVVAENESGYKKLHDADDKWHKKPKKTTSGSKKKSAKNISKKKTRNVSTNACGKCGKAIRSLSTRNSLKCVCKDIKQELIEIDQKPAVESTQSNQPNTKRKLKYKSLKKYECTICSKEFPNSKRLNGHLRNHKERNISCDMCDRKFVYQNQMQKHKLEVHLASYTYECELCSSTFKSKPSLNQHLQKMHIKMYKFQCDKCDKGFFVRPDFERHVRVVHEQFRYYCESCGKPFLTEQGLKIHAVIHDPTAVRQTYKCTVCPDTFVAKHRLNHHMKKHEANGGEVYVCEHCGKGFTYTIGLKLHMRVHSGEKPYKCDTCDKTFRATNTLKIHRRIHTDEKPYVCQFCDKRFRQRPPLKKHLRYHTGEKPYRKTNVSLDSKLNAIDNEQKPLLETTQSNEPNIKVETKNTHPMKYECNVCAKQFPNSKRLKSHIRNHKERNISCDMCHKKFIYQHRMQKHKLEVHLASYTHECDLCGTSFKTKLTLKQHIQNTHIKIYNYQCDKCDKGFFLRPDYERHVRVVHEQYRYYCESCGKPFLTEQGLKNHAIAHDPAAIRKTYQCPICPASYVAKYRLNHHMKKHEANGGEVYVCEHCGKGFTYPAGLKLHMRVHSGEKPYKCDTCGKHFRTSGVLKTHQRIHTDEKPYVCHFCDKRFRQGPPLKIHLRYHTGEKPYREFLMLEFSPKKKRGNWSEDALKLAMDAVNRKEMSVRAAALRYKIPRRTLKNHLATGSYRKKLGRSCTLTEDLEKDLANKIVRFANIGIPLTPKIISKQAYAFCKASNIQNRFNEARGSAGRKWLKNFLNRHPAVSKRKVHVMNPARTQKLNKPMVSQYFEAIKEIYDHLDISNHPERLYNVDEKVFCLTLQHDQQVLTQKGARIVNLVAPEHADNVTVTTCVNAMGDAIPPMIIFKGKRSRAEFTENLLLGSSVKMAPTGRMTTDLFIEFIQHLAKYKTHGKCLLVFDGACSNLDYGIVDVAEENDIILYCLPFNATQELQPLDKSVNKSFEHHWDEEVLVYTNQHPDKKITKVRFNEILTKIWPKCVTISNIIHGFKVTGLFPWDPNVIPEEAYMHLRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00388122;
90% Identity: iTF_00388122;
80% Identity: iTF_00388122;