Basic Information

Gene Symbol
ZFX
Assembly
GCA_958507055.1
Location
OY293832.1:10806750-10825176[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0043 0.67 12.0 0.0 1 23 176 199 176 199 0.92
2 25 0.11 16 7.7 0.5 2 23 206 229 205 229 0.96
3 25 0.00015 0.024 16.6 0.5 1 23 235 257 235 257 0.98
4 25 0.051 7.9 8.7 2.2 2 23 269 290 268 290 0.95
5 25 0.00082 0.13 14.3 1.2 1 23 322 344 322 344 0.97
6 25 1.1e-05 0.0016 20.3 0.6 1 23 350 372 350 372 0.98
7 25 0.00032 0.049 15.6 0.5 1 23 378 401 378 401 0.96
8 25 0.16 24 7.1 2.1 1 23 411 434 411 434 0.95
9 25 6.2e-07 9.5e-05 24.1 0.9 1 23 533 555 533 555 0.98
10 25 0.0001 0.016 17.2 4.1 1 23 561 583 561 583 0.99
11 25 1.5 2.4e+02 4.0 3.6 2 23 590 611 589 611 0.97
12 25 0.00045 0.07 15.1 0.8 1 23 690 712 690 712 0.98
13 25 9.9e-05 0.015 17.2 1.2 1 23 718 740 718 740 0.97
14 25 2.7e-06 0.00041 22.2 0.8 3 23 748 768 746 768 0.97
15 25 0.26 40 6.5 3.5 1 23 774 797 774 797 0.94
16 25 0.86 1.3e+02 4.8 0.1 3 19 1015 1031 1013 1031 0.93
17 25 0.16 24 7.1 2.7 2 22 1076 1096 1075 1098 0.80
18 25 0.3 47 6.2 0.1 1 23 1110 1133 1110 1133 0.95
19 25 5.1e-06 0.00078 21.3 3.2 1 23 1145 1167 1145 1167 0.98
20 25 4.2e-05 0.0065 18.4 0.6 3 23 1175 1195 1173 1195 0.98
21 25 0.00016 0.024 16.6 0.1 1 23 1202 1224 1202 1224 0.97
22 25 0.18 27 7.0 3.5 1 23 1230 1253 1230 1253 0.94
23 25 2e-05 0.003 19.4 1.0 2 23 1415 1437 1414 1437 0.97
24 25 6.2e-05 0.0095 17.8 1.7 1 23 1443 1465 1443 1465 0.98
25 25 0.0011 0.17 13.9 1.9 1 23 1471 1494 1471 1494 0.98

Sequence Information

Coding Sequence
ATGTTATCGTCAACCCTTACCTCCAACAACATGAGTGCCAATACTGAAACGACAGATTTAGCTACACTTATAGATTTACCTTTCAGCAACGATACCAATTTAGAAGTCATACCCGATGTTTATTTGGAGCAACTAGCCGATGGAAGTTTTCGTTTAGTGAGGCGATCGCAGGATTTTGAACCTCCAACAGTTCCTACAAACTACAGGGTAGATCAAACTCAGCAAATTGATACTGAAACATTCGATATTGATCAACGACAAATTCAACAGGTTATCCTGAGTCAAGTATCGAATAATGAGGCAAGTGGTATTACAGTTGATATATGTTTGGACCGAGTTAGTGCACCATTTGAATATCTAGATAAGAGTTTAGTGAGCAAAATCATCCCTGAGAGTATACCGCACAGTGTCATACAAAATAATCCAGCTCCCAAAGAAAATGTATGTAATAAAGACTGTTGTACTATTTGTggaatttttttcgataatatcGATCAACACAAGGAGCATGTATGTCACAAAAAGTTTGTATGCGGCAAGTGTCCAATCGGCTTCAACGAGGAggataatttgaaaattcatattgtACTCACACATTCTGATGGTGATATTACAAAATGTCCAATATGCAATATCAACCTGACATTCCAAAGAACTGCTAGATTAAGGTCGCATATGCTTATGCATCAAGTGGACGAATCATTTATATGCAACAAATGTGGAGCTGAATACGAAACTGAGGAAGAGTTCACGAGGCATCTTAGAAAACATAAgcaaattaaatcaaataaaaataacttattaaaATGCAGATATTGCAAATtggattttgataattacaaACAGTATCGAAAACATGTTTCGGAACATGTGAAAATCAACAAGATTCTTTCTAAACGGAAGAAACCCAGCAGCAGTAGCAGCAGCAGTCGTACATTTGTGAAGAGTGTCGGAAATAATGGTCATGTGTGTTCGGTTTGTGgtaagaatttcttgaaaagATCACTGTTGGTGAGGCACGAGAGGATACATAATGGTGAAAAACCCTTTAAGTGTCTTGTCTGTGATAAAGGTTTCAACCAAAAAAATTCTCTGAATGTCCACATGATCCAACACACGGGAATTAAGCCGTTTGCTTGTACGCTCTGTCCTTCAAAATTTGCACAGAAAGGTAATCTACGTATCCATTTACAAAAAACTCACACCGTATCCGATGAAACAGAGAAATCCTTTAAGTGTTCGCAATGTACTtgcatctttaaaaaaattgcctcaCTTAATGGTCATGTCACAAAAGTACATTCCAATAATAAACCAACCAATGATAATAGCATTGATGATGTTATGCGTAATCTGAAACAGCTACATCAACAAACAAGtcatgtaaataatattttggataCTGCAAAGGAACCGGAAAAGAAACAATCACCACCACCTTCAGAACAACTTGTCGTCCATGACCAAATACAAAATGCCACTACTGTTGTTGCTGCAGAAGATGATACAAAATTTGTGACATTGTCAGAGTCCAGGAATGATGGTACAATTAGAAAGTTTGTTGTTCGACATCGATTGAATGAGGATGTTAGATGgtattattgtaattattgttcAAAAGCATTTAAAAAACCATCGGACGTTATTAGGCATATGAGGATTCATACCAGAGAGAAACCGTACAAGTGCAAAATATGTAAGACAGGATTCTCCTTGAAAAATACATTAGTACACCATATGAAGACGCACAAGTCAAATAAGATGCTTAAATGTCAAAAATGCGATTACAGTACGTCATGCTTGAGAGTACTCAATGCACATAGAAGgCGTCATAAAAACTCAGAAAGCAGATTAAAATGGACTTGTATTACATGTGATATTTGGTTTGATCATTTTGAGAATGCTCAACAACATAAAACCGTATGTAATGATAACAGATATCACATAATAAGGCCGGATTTTCGGGTTGTGTCCAAGGAGCAGATTGAAACTGCTGCTACAGTGGATGATACACCTGAGGCAATTGATGATCTTCTCACATTTAATAAACCAACAAAACCAAAACCGTTTGAATGTGAAATTTGTGGTTCGAAGTTCTCTCGAAAGCTCACCTGGATGCGACATCTACAAAATCACAGAGGTGATCGACGTTTCAAGTGTAACATTTGCTTAAAGGCTTTTGTATCCTCGTCTAGATTGAAGGAACACATGAgctttcacaaaaatattaaaaattatggaTGCAAATTGTGCGACAAGCGTTTTGTCACTTCAAGTATGTTGAATAGACACATGATCAGTCACAATAGTCAGAGACCGTTTTTGTGCTCGAGTTGTTCCAAGACTTTCAAGAGTGTCGCTTTATGTAGAAGACATATTAAAAAGGTCCATAAGAACAGTGATAATGCCATCAAATTTCAATTAAATTCTCAGGCAAATAATCTGCAATTGGTCCTACAAGGTCTACAACAATCTACAATGTTACCACCAGCAAATGACAGCACTATATTAAATGATAATGACaatgaaaaaacacaaaaagaaACATTTCAAACTTTATACATAGATATAAATGATTTACCACTATTGGaaaattccaatttaaatttaaatttgtttggcACCCAGAAAGAAGCAGAGCAGCAACAgATTGTTGATACCAACAACTTGCAAATACTGACTCAGCGACAAGATCCATCTGCTGTCATTTGCAGCTTCGACAAAAATATGATTGATCACCAACAGAACTCCTCCTCTTCCTCCTCATTTCTTGGAGACGATACAAACAGAAGATTTCATCTTAGTAAAGTAACAAATGACATTATTGACAACCAGCAAAATCAATCACTGAATGAATCGTCGTTTGTTTCCAACAATGCAACTACTGAAAACATGCATGTGACAACAATGAATGACGAAACATCACAAAAtcctacaacaacaacaacaaataataatctGCTGCTAGATGGCGTTTTTGAAATAGTATCGAATGCCAATTTAAATGACAATGATAACATCTTCGAAGACGCGAACATTATATGCATGTTGTGCAATGAAATATTCACCAGTTTATCAACATTCAAAGGCCATGATTGcaataatcaaatcaaaaaacagCAACATGATGAAAATGatgtgaataattattattccacccaacaacaacaacagtatGACGActcatcattatcatcatcacACCTGGTGGATTTCTTAGTGATTCAGTGTCATACGTGTGGGAAATATTTCAAGGATCAAAGAGAACACGAGCTACACAACTTGAAGATGCATTCAACTAGAAGATATTACAATTCTGATGATAAATACGAATGTGCCTTGTGCAAGGAGGTGATAGTAGGTAGGAAGGATTATCGAAAGCATTTGATGGGCGTGCATGGAAAAAAGTCTAAATTGACGATGACGCTGCTTCATACTTGTGAGTATTGCAGCAAAACGTTTAAGAAGGGATCGGATTTGACGAGGCATATTCGAATTCATACCGGTGAAAAGCCATTCGGCTGTAATATTTGTGATCGAAAGTTTGCTCTCAAATCCACATTGGAGTCACATGTCAGGACACATGATCCCAATCAGAAGCAATTTGCTTGTTATATTTGTGGATCGGTTTTTGCATCGAAGCCAAGCTTGAAGATTCATATGTCTATTCATACAGGTCATAAGCGATTCACGTGCACCTTCTGTTCAATGAAATTTCGAACAACTAGTAACAAAAGTTCTCACGAAAAATTGATGCATCTAACACCAAAAGAGGGAAAACAAACTGACAGTGAGCAGCAACCGACAAATATTCGAAAGGTATTGGAGAGTGTCGTTATGGAGATTGCCAATAATATGGAACAGTCAACACTGTCTCAAGATTTACAAAGTCAAAACTTGATATCTGCACATGATTTATCCAATAATATTAACAACGATGGTAATGTAATGCTACAAAAGGATCAGCAACAACAACTGACCGTCGATGCATCGGCACTTTTACAACAACTTCAAATGAACAGTTCTGGCATCATTCAAACACCACTCATCCTCGAAGATGTCACTCTACTAACTTTAGACCAATGCAAAGACAACAGTGACAACAATATACAAATCATATCCTTATCCGATCTGGGATTGGATAACAATATGGTGACAAATGTGCCAAATAATCTTCTTAATACCAATACAAAAGCTAGTCTTGTAAATGGTGGTGGTGTAAAGAGTACCAAAGTACCTGTAGAGTGTGAAATCTGTCACAAGATGTATTCGGCCAAGGATGCACTGAGAAGGCATCAGAGAAAAGTTCATATTCCAGATGCAAAGTTTTCATGTGGTAAATGTCCGTTGAGGTTCAGTACGCAAGATGAGTTGCATAGACATGAGAAGGTACATTTGGGTTATAGACCATATTCGTGTTTATATTGTGCTAATAGTTTTACCAACGAGCAAAACTACAAGACTCACATGAAGAGGATTCATCAGCAGTCTAGCCTATCCAAGGAGACAACTGATGCTTTACTGAATAtggattttgatttaaaattggATGGTTCAGCTATTTGA
Protein Sequence
MLSSTLTSNNMSANTETTDLATLIDLPFSNDTNLEVIPDVYLEQLADGSFRLVRRSQDFEPPTVPTNYRVDQTQQIDTETFDIDQRQIQQVILSQVSNNEASGITVDICLDRVSAPFEYLDKSLVSKIIPESIPHSVIQNNPAPKENVCNKDCCTICGIFFDNIDQHKEHVCHKKFVCGKCPIGFNEEDNLKIHIVLTHSDGDITKCPICNINLTFQRTARLRSHMLMHQVDESFICNKCGAEYETEEEFTRHLRKHKQIKSNKNNLLKCRYCKLDFDNYKQYRKHVSEHVKINKILSKRKKPSSSSSSSRTFVKSVGNNGHVCSVCGKNFLKRSLLVRHERIHNGEKPFKCLVCDKGFNQKNSLNVHMIQHTGIKPFACTLCPSKFAQKGNLRIHLQKTHTVSDETEKSFKCSQCTCIFKKIASLNGHVTKVHSNNKPTNDNSIDDVMRNLKQLHQQTSHVNNILDTAKEPEKKQSPPPSEQLVVHDQIQNATTVVAAEDDTKFVTLSESRNDGTIRKFVVRHRLNEDVRWYYCNYCSKAFKKPSDVIRHMRIHTREKPYKCKICKTGFSLKNTLVHHMKTHKSNKMLKCQKCDYSTSCLRVLNAHRRRHKNSESRLKWTCITCDIWFDHFENAQQHKTVCNDNRYHIIRPDFRVVSKEQIETAATVDDTPEAIDDLLTFNKPTKPKPFECEICGSKFSRKLTWMRHLQNHRGDRRFKCNICLKAFVSSSRLKEHMSFHKNIKNYGCKLCDKRFVTSSMLNRHMISHNSQRPFLCSSCSKTFKSVALCRRHIKKVHKNSDNAIKFQLNSQANNLQLVLQGLQQSTMLPPANDSTILNDNDNEKTQKETFQTLYIDINDLPLLENSNLNLNLFGTQKEAEQQQIVDTNNLQILTQRQDPSAVICSFDKNMIDHQQNSSSSSSFLGDDTNRRFHLSKVTNDIIDNQQNQSLNESSFVSNNATTENMHVTTMNDETSQNPTTTTTNNNLLLDGVFEIVSNANLNDNDNIFEDANIICMLCNEIFTSLSTFKGHDCNNQIKKQQHDENDVNNYYSTQQQQQYDDSSLSSSHLVDFLVIQCHTCGKYFKDQREHELHNLKMHSTRRYYNSDDKYECALCKEVIVGRKDYRKHLMGVHGKKSKLTMTLLHTCEYCSKTFKKGSDLTRHIRIHTGEKPFGCNICDRKFALKSTLESHVRTHDPNQKQFACYICGSVFASKPSLKIHMSIHTGHKRFTCTFCSMKFRTTSNKSSHEKLMHLTPKEGKQTDSEQQPTNIRKVLESVVMEIANNMEQSTLSQDLQSQNLISAHDLSNNINNDGNVMLQKDQQQQLTVDASALLQQLQMNSSGIIQTPLILEDVTLLTLDQCKDNSDNNIQIISLSDLGLDNNMVTNVPNNLLNTNTKASLVNGGGVKSTKVPVECEICHKMYSAKDALRRHQRKVHIPDAKFSCGKCPLRFSTQDELHRHEKVHLGYRPYSCLYCANSFTNEQNYKTHMKRIHQQSSLSKETTDALLNMDFDLKLDGSAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-