Casp048597.1
Basic Information
- Insect
- Crioceris asparagi
- Gene Symbol
- CSRNP3
- Assembly
- GCA_958507055.1
- Location
- OY293833.1:15034599-15035966[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.24 6.5e+03 -1.6 0.6 93 102 65 74 32 138 0.55 2 3 6.3e-19 1.7e-14 55.8 0.2 4 63 254 315 249 330 0.79 3 3 1e-34 2.8e-30 107.4 15.7 108 217 324 432 312 433 0.92
Sequence Information
- Coding Sequence
- ATGGAGGGATTAGAGGAAACCGAACTACAAGTTCGACTAATTACCGGACTTCCCCTAAATAATTcgccaaaaaaaaataatgggcTTTCAACACCCATTCGAATATCATCAAACAGAGATAAATCAGAGGATTTTTCAGTAGCAAGTTCCAATATATCTGATGCCATTTCAGAACAAAATTCAGCAtatctagaaaataataaatctagCAATCAAGAACTAATAACATATACTGATAGTGATACATGCGGAAATGACAAAATTAGTGAAAACAGTACATGTTTAACCTTGAATAACAATGTACCAGAtatgaaatcaaaaaattacaGCCCCAGTACAAAAAGTGATTCCTCATTTGATCACTCTTTTAATAAATCTATGGAAATCAATAACGAACCATCAGAGAAGAAACTTTTCATATCACTTCACGATTGCAGTCTTACGGTGAGAGATATAGCCTTGGCTTCTAGATCATGTCAAGACATTGAGTTCATTGATGCTGAGCCAGATGGTGTTCTGGttgaaacaaaacaaattcaaaatgatGCAGACAGTATTAATCAAGATATTGATGATAAGTTAGGTGTTAAGGATTTATTGAACTCATTAGCGAACTCTATCATAGATGGTTGCTCGCTACCCTCCGAGCACAAAATGATTAGTGACACATCAAGAACGGTCACAATACCAAGCTCACACAAAATTGATTTGAAACGCAAACTATCGACAAGCCTGGAAGCAAAGAAAAATAAGATGATAAAGTATCTGCGCTTTGCGactgtaacatttttctattttgagAGATCTCAAGGCTTTTCCAGCATACCCAGTAAAGGGGGTGCTACTTTAGGAATGAGCCAGCGTCATTTTTACATCACTTCATTATCTGTCGAAGAATATGAACACAACAAATGTCCTAGATATCTTCCAAGAACAAGATCCACCAATATCTTAACTTCTCAAAGGATTGAACaaccaaaaaatattgaagctttgtcTACAGTCCAAAGAATTCAACTACTAGAGTCATGTCATATTGTTGTAGATCCGGCTGAGGAAGAGGATTGTAATCAAATCCGCTCTTCTAGAATGGCAGCCGGGTGTCTCTGTCGAGATTACTGTGATCCAGACATTTGTCCTTGTCACTTAGACGAAATCAAATGTCAAGTGGATCAGCCGAATTTTCCTTGTAGATGTTCAAGAGaacattgtaaaaataaatCCGGTCGCATTGAATATAACAATTCCAAAGTGAAAAGTCATTTCTACAAAACTATGCGAAAAATAAAATGTGAGGGTAAAAAGAAACATATAAAACGTAATCCAAATAGTCCTTTAAAAGGTGGATCTGATATTAGTTTTTGGTGA
- Protein Sequence
- MEGLEETELQVRLITGLPLNNSPKKNNGLSTPIRISSNRDKSEDFSVASSNISDAISEQNSAYLENNKSSNQELITYTDSDTCGNDKISENSTCLTLNNNVPDMKSKNYSPSTKSDSSFDHSFNKSMEINNEPSEKKLFISLHDCSLTVRDIALASRSCQDIEFIDAEPDGVLVETKQIQNDADSINQDIDDKLGVKDLLNSLANSIIDGCSLPSEHKMISDTSRTVTIPSSHKIDLKRKLSTSLEAKKNKMIKYLRFATVTFFYFERSQGFSSIPSKGGATLGMSQRHFYITSLSVEEYEHNKCPRYLPRTRSTNILTSQRIEQPKNIEALSTVQRIQLLESCHIVVDPAEEEDCNQIRSSRMAAGCLCRDYCDPDICPCHLDEIKCQVDQPNFPCRCSREHCKNKSGRIEYNNSKVKSHFYKTMRKIKCEGKKKHIKRNPNSPLKGGSDISFW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -