Basic Information

Insect: Crioceris asparagi
Gene Symbol: l(3)mbn
Assembly: GCA_958507055.1
Location: OY293829.1:30834633-30838710[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-11 1.1e-08 36.2 0.1 2 39 19 56 18 60 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-11	1.1e-08	36.2	0.1	2	39	19	56	18	60	0.88

Sequence Information

Coding Sequence: ATGCCACGTGACTATGTACACGATCcaagatcaaaattttataagaaGCCAAACAGGGAAGCTATTGAACGGGCCCTAAATGATATAAGAAATGGAATGTCATATAGGAAGGCCAGCGCAGTACATGAAATAAACTATTCGGTGCTCTATAGACACCATAAAAATACCAACTTGAAAAAACCTGGAGGACAAACGGTATTAACGGAGCTAGAAGAAAGAGTCATACTCAAACAGCTGATAACGTGTGCGGATTGGGGCTATCCTCTAGATAAATATGACTTAAGAACTGTGGACGAGTGCTTGCAACACAATATTTCCTTTATTTTTCTGCCATCGAACTCAACTCATATGACTCAACCCCTTGATGTCGCTTTTTTTCGACCCCTGAAGGAAGCATGGAGAAAAATCCTAGAAAAATGGAAGATGGGTGAGGGACGAAGAGCAGCCACAATACCAAAAGATCGATTTCCCCATTTCACAAAAGGGTTGATGGAAAATATTAAACCGAAtcaggaaaaaaatatcaagtcTGGCTTTAGAAAATGTGGCATTTATCCTCTAGATCGAGACCAAGTTTTGAAGAGACTCTCAAGTGTTCCGACTGAAAATGTCGAACAAGTTGAAGAACATGTGAGCAATGTAgttgtgaatattttaaaatctttgaGGTATTCTGATACAACTACACAACGGAAAAGACGAAAGAAGGTTGACGTAGAAGCAGGTAAAAGCATATCTGGAGCAGATTTCCGAAATGATGAAGAAACTGAAATTGAATGTGAAGATGAAGGTCCTTGTTTGCCAGATAATACGAGTGATGACGAAAATGAAACACTCGAACGAAATGAAGATGAAGAATCTCTTGATTCAGACAAAGATGAAGAAATGAGCATGTCTCTAGCAGCAATTGCTGCCTCTCaagcaaaatacaaaaaagaatcaATCCCTAGTGTATCTCATAAAGGAAGAgttttcaaacatatttttccCGTTTCGAAGGATTCCATTCAAATATCCGACTGGCTGTTGGTTGCCTTCCCAGCTTTTCGTTTCGGAAAAACGaagaaattcaaatattatattggGAAAGTGTTGAATAACGTTGATGAAAACGATGAGATTTGTGGAACTTTCTTGAGATACTGCCCATCTATGCAATCCTCAGGACACCTTTATGCATTTCCTGTAAAACCTGACGTTTGCTATTTCTCGTATGAACAAGTTGTTGGACAGATTCATCCAGCAGATGACTGCGAGGTTCCAAATTCGAATGGCATCATCCAAGGAGAATTTGGATTCATAACAGCTGATGGCGTATACCATGTAACAGTCTATGCGACCGATGAAAAtggaaatttcaaaatactgAGCATGAAAAATATAAGAGTTAGCGCTCCGCTCGATGGATCTCCTGCTACTGGACCAATTTCCCCTGATGCAGCAAAATACATTGGCAAACAAAATCCACCTGCGCAACTACCTTCTACTCAAGCTCCACAACAATTCCAGAGACTCCAAGAGCAACCAAAGGCTGTTACTCCATTTCAAGGATTTACAACACAACCTACAATCAGACCTGCTTGTGCAGGCTGCGGCTACGTAACTACTGCCAAGTCAGTACCAGGACAACCATTTGGACTACTAAATACTTCCCGTCCACAAGGTCATCTACAGGTACCAATAGCATCTCAGAATGGATACAATCAAGGCGAAAGCTTAGACTTGGTTCGAACTCCAGATGCTGAGGTTATACCTCAAGGGCTTGGAGTGGATAAACCAAGTCAGGTTGGTATTCAAAATCTTCCTCCACAATTCCAAAGTCAGCAACCGAATGTTCAATACCAGCAGAATGGGCAATCTCAGCTACAGAGTCCACAACAAAACTTGTCACAAGGTAAACAATCCTATGGTCAAAATCAGCAACAGGTCCAAGGGCCACAGCAAAATGAACAGTCAGATGCTGAGATTATACCCCAAGGGCTTGGAGTGAGTCAACCAAACCAGGTTGGTGTACAAAATCCTACTTCACAATTCCAAACTCAGTACCAGCAGAATGGTTTTAATCAGCAGACAAATGTCCTTACCAATATAGAAAATGTCCAGGCAAATATAGAAAGTATTTCCAGAGGAGAGGCTCCAAATTTATTGGCTTCCAGAATAGGCAATGGGAACCAAGGTTCTAATTATCCAGGTCAAGCAATCAATAGGGGAACTAACCCTTCCATTCAGTCTCAGCAGATTTCGCAGCTACCTCCCATATCTGTCGATGATAATGTTATCCATGTTGGTGGAAAAAACCCAAAGGATATTCCTATCCAGGATAAATTTCCAGGTATGGTCGCCGGACTTCCTGACGGTATTGAGGAGAAAGACGTCACCAACATCCTCTACAAATTCAAATACACGGTTGGTTTTCATGGGCATTGGGAGAAAGGTCTCAAGAATGGTGCCAAAGTTGGTGGGTACTTTGTTAACGGACGTGACGGAATAAGCAGAGTGGTCACGTACATTGCAGATGAGAATGGCTATCGACCCAAATTTAAATTCATCAATTTGGGTTTGGATTCAGATGAAACACCCAAAGAGGGCTCAGAGAAGAAGTTTGGACTGAAGAGTTTTGAATTTGTGTGGTATCCAATAGAGTGA
Protein Sequence: MPRDYVHDPRSKFYKKPNREAIERALNDIRNGMSYRKASAVHEINYSVLYRHHKNTNLKKPGGQTVLTELEERVILKQLITCADWGYPLDKYDLRTVDECLQHNISFIFLPSNSTHMTQPLDVAFFRPLKEAWRKILEKWKMGEGRRAATIPKDRFPHFTKGLMENIKPNQEKNIKSGFRKCGIYPLDRDQVLKRLSSVPTENVEQVEEHVSNVVVNILKSLRYSDTTTQRKRRKKVDVEAGKSISGADFRNDEETEIECEDEGPCLPDNTSDDENETLERNEDEESLDSDKDEEMSMSLAAIAASQAKYKKESIPSVSHKGRVFKHIFPVSKDSIQISDWLLVAFPAFRFGKTKKFKYYIGKVLNNVDENDEICGTFLRYCPSMQSSGHLYAFPVKPDVCYFSYEQVVGQIHPADDCEVPNSNGIIQGEFGFITADGVYHVTVYATDENGNFKILSMKNIRVSAPLDGSPATGPISPDAAKYIGKQNPPAQLPSTQAPQQFQRLQEQPKAVTPFQGFTTQPTIRPACAGCGYVTTAKSVPGQPFGLLNTSRPQGHLQVPIASQNGYNQGESLDLVRTPDAEVIPQGLGVDKPSQVGIQNLPPQFQSQQPNVQYQQNGQSQLQSPQQNLSQGKQSYGQNQQQVQGPQQNEQSDAEIIPQGLGVSQPNQVGVQNPTSQFQTQYQQNGFNQQTNVLTNIENVQANIESISRGEAPNLLASRIGNGNQGSNYPGQAINRGTNPSIQSQQISQLPPISVDDNVIHVGGKNPKDIPIQDKFPGMVAGLPDGIEEKDVTNILYKFKYTVGFHGHWEKGLKNGAKVGGYFVNGRDGISRVVTYIADENGYRPKFKFINLGLDSDETPKEGSEKKFGLKSFEFVWYPIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -