Casp022717.1
Basic Information
- Insect
- Crioceris asparagi
- Gene Symbol
- Hlf
- Assembly
- GCA_958507055.1
- Location
- OY293828.1:25818882-25822578[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-14 8.4e-11 43.2 13.3 1 64 174 237 174 238 0.97
Sequence Information
- Coding Sequence
- ATGTCCACATCGCGTTGTGGGCAAGAAATATTTCGTAAACCAGCCCACCCGCACGGACATGGTCATTCAACGATCAAAGATTTGACTAGTGGAATACTTGGTGATGACAAAAATAAAGACGATGGCGAGATATGGAACACGGTCGAGGCTCAAACAGCTTTTCTCGGACCAAATCTTTGGGATAAAACATACGAAACTGACCTtaagTACGTGGATTTGGATGAGTTCTTATCTGAAAATGGCGTATCAATGGACGGTCTTGGATCTCACAGCTCACTTGGACAATTGAGCTCATCCCAATCTCTACCCAAAAGAGAACCATCTCCAAGTCCAAGTGATTGCATGAGTCCCGATACTATGAACCCACCTTCCCCAGCTGATTCAAttttttctgAAGCATTATCTATGGCTTCGAGTTGTCGAGACTTCGATCCACGGAAGAGAGTATTTTCAGATGAGGAGTTGAAACCGCAACCGTTGATCAAAAAGTCGAGAAAACAATTTGTGCCTGACGACCTGAAAGATGACAAATACTGGGCTAGGCGCAGAAAGAATAACTTGGCAGCCAAAAGGTCACGAGATGCGAGACGGATGAAGGAGAATCAAATTGCTCTCAGAGCTGGATATCTCGAGAAAGagaacgtGGGACTGCGCCAAGAATTAGAGCGACTGAAAAAAGAGAACCTCTTATTACAAAACAAATTGGCAAAATATGAAGATGTTTAA
- Protein Sequence
- MSTSRCGQEIFRKPAHPHGHGHSTIKDLTSGILGDDKNKDDGEIWNTVEAQTAFLGPNLWDKTYETDLKYVDLDEFLSENGVSMDGLGSHSSLGQLSSSQSLPKREPSPSPSDCMSPDTMNPPSPADSIFSEALSMASSCRDFDPRKRVFSDEELKPQPLIKKSRKQFVPDDLKDDKYWARRRKNNLAAKRSRDARRMKENQIALRAGYLEKENVGLRQELERLKKENLLLQNKLAKYEDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021978;
- 90% Identity
- iTF_01014000;
- 80% Identity
- -