Basic Information

Insect: Crepidodera aurea
Gene Symbol: ci
Assembly: GCA_949320105.2
Location: OX439474.1:59621634-59629915[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0077 0.97 11.1 0.7 3 23 237 260 235 260 0.94

2 5 0.15 19 7.1 0.1 3 23 270 295 268 295 0.79

3 5 0.00021 0.027 16.0 1.9 1 23 301 325 301 325 0.97

4 5 0.0014 0.18 13.5 0.2 1 23 331 356 331 356 0.97

5 5 7.7e-06 0.00097 20.6 0.3 1 23 362 387 362 387 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0077	0.97	11.1	0.7	3	23	237	260	235	260	0.94
2	5	0.15	19	7.1	0.1	3	23	270	295	268	295	0.79
3	5	0.00021	0.027	16.0	1.9	1	23	301	325	301	325	0.97
4	5	0.0014	0.18	13.5	0.2	1	23	331	356	331	356	0.97
5	5	7.7e-06	0.00097	20.6	0.3	1	23	362	387	362	387	0.97

Sequence Information

Coding Sequence: ATGCACCAGAGAATGGAAAGAGACTTTTACGAGAATGTTTGTGAACACATGCATGAACCGCTGTGTGCATCTGGACTGGGATTGAGTCCAGAATACTTAAGTGCAAGAGGCTTAACAGAAGTGCATCCTGCATCTACCTTAGGCAGTTCGGAATTTCCATTTAGTATAGATGGTTCCAGATTAAACAGTCCCCGACCAGGCAGCATACGAGCTTCCCGTAAACGTGCCCTCTCTTCCTCTCCCTATTCCGATTCTTTCGATATCAATTCCATGATAAGATTTTCGCCAAACTCTCTTGCTTCTATTGTCAATGGATCCAGGTCATCGAGTGCGAGTGGTTCATATGGCCACCTGTCAGCTGGAGCGATCAGCCCAGCCTTGGGGATGCATCCGATGCATCTCCAACAGCTCCAAGCTCACCTCATGCGTAGTTCTGGCTCGTTGCTACCGCTACCCCCGGCTGCTCCACCTCCCCATCCAATGTACTCGTTAGGACATCACCCGCTACATGTAACTCACAATATTAAGACTGAAaTATTAAATGACCGAAAAAAGTCTGAAACTAGTACAATAACTCAACTTGACGTCGATTCGTCGTCAAGAAAATCCAAAGTAAAAAAGGAGCCATCTCCCAATTCTTGTGGGCAAGAGGGGCATAATGATCCCACTGATCTCAAAGATGAGCCAGGGGACTTTATTGAAACTAATTGTCACTGGAAAGATTGTTCAACGGAATTTGGAACGCAAGAAGAGCTAGTAAAGcaTATTAACAACGACCATATTCATGCGAACAAGAAGTCCTTTGTATGTCGCTGGGAAGGCTGTTCAAGAGCTGAGAAGCCTTTTAAAGCTCAGTACATGTTGGTGGTTCACATGAGAAGACATACTGGCGAAAAACCACACAAATGCAcaTTTGAAGGATGTGCTAAGGCTTACTCAAGACTGGAAAATCTAAAGACTCATCTTCGATCTCATACTGGCGAAAAACCTTACACCTGCGAATATCCTGGATGTGCGAAAGCATTCAGCAACGCATCTGACAGGGCAAAACATCAGAATCGAACACACAGCAATGAGAAACCGTATGTGTGTAAAGCTCCAGGATGCACAAAAAGGTACACTGATCCCAGTTCTCTCCGAAAACATGTTAAAACTGTACACGGAGCAGAATTCTATGCCAGCAAAAAACACAAAGGTTCCGAGCAAGGTCCAGATGATGGTCCAGCCGGTTTGGATTCGAGTCCTCGTAGCGAAGATATGCAGAGCCACAAGACAACGAGTCTTAGCAGTCCCAGTATCAAATCGGAGTCGGATGTCAATTCTCCTGGACAACATCAACAAGGAAGTCCTCTTGGAACCACGCAGCTTGCAGgtcTTGGTGGTTTCAATGACGACCTTCCAGGAGATATTGGTGGTGGGCTTGTACCTCCTGACGATATACCATGGGCGTACGACGCAGAAGATTTGGAAATTGACGAACTTCCTGTAGTCTTAAGAGCAATGGTCGGAATTGGGGGGGACAGAGGAGGACTAGCGGTAGCTGAAAGAACTCCAAGAGTTAGAATGAAGCACCTTACTAAAGGAAAACCCACCACAATTCCGTCTTTGAACacgcaaagaaaaaatattgccGATTTGAATAGGCGAATAACCGATTTGAAGATGGAAGgtaatACAGGTAATACACAACCTAAAACACAACTAACAGATCTTCAACAACGTCTTCAACCAAGTAGCGGGAATACTCAAGCCCAAATACGAAGAGATAGCAACTCTACCGTTAGTTCCTATTATGGAAGCATGAGAAGTGCTGACATGAGTCGAAAAAGTAGTCTAGCATCTCAGGCATCAAGCATGAGGCCCGGAATAGCTCCAGGATCTTTTTACGATCCGATCTCTGCCGGAAGTTCTAGGCGGTCGAGTCAATTATCTACTACAACAACCGGGGGTACATGTATTCCACCACCTCCTCCTTCTCACCTACTCGCAGGACAactacaaaaattacaaaattcccCTACATCAGTAAACAACAGCAATTTAGTACTTCAGACGCAGAATATGTCACTTCAACAAACAGCTATCCAACAAACATGGCTGTCTTCGAATCTCTCCAATATTCCATCAACCACAACCAGCACGGATGCTCGAAGAATGTCAGAACCATGTCACACTTTAATTGACAGAAAAAGCCCACCACCTCGTCCAGCATCGGTTTCTTTATCACCTCTTAAAGGTACGGTGAACTCATCGGAACTACACCCTAACCAAGCCGTAGTTCTCGATGAAGTTGGTGAAGGAGAAATGGTAGAAAATAAATTGGTCATACCTGACGAAATGGTCAGATATCTAAATCAAGTAGCAGATAAACAGAATGTAATGAGCTGGTCAGATACTAATCAGAAGCCCTTAGGAAGTCCTTCGCAAATGATTCCATCTCCATCCAGTTTTACATTGCCATCTCCTCAGAATATGTCACCTTCTGCTATAAGTCAGATTTTGCCTTCACCAAGCAGTTTAAATCAAATAATGCAGTCGCCTTCTAATAATCTCAATCAAATGATACCATCCCCTTCGAACACTCAAATAAACCAAATGATCCATTCTCCTGCTTCTAATCTTAATCAAATGATACCATCACCGGCTCCTAGCAACCTTAATCAAATAATGCATTCACCAGCTTCAAATATGTCTCATATGATGCCATCACCTTCTGCGAACCTAAATCAAATGATACCCTCTCCAGCTGCAGCCAACTTAAACCAAATGATGCCATCACCTTCTGCTACGAACCTAAATCAAATGATGCCGTCGCCTGCTTCTAACCGAAATCAAATGATGCCTTCGCCCGCATCCAATTTGACTCAAATGATGCCATCTCCTTCAGCCAATACTATGAAACAAATGATGCATTCACCAGGACCACACAATTTGAACCAAATGATGCCTTCACCTGTCTCCAACAATATGAGTCAAATGATGCCTTCCCCAATTACTAATATGAATCATGGAACCTCGTCAAATTACCAACCGTCTAATTACGGAATGCAGAATAATGTTATGCAACAAAACAACATAAACCAAATACCAGTGAGGTGTCAATCTCAAATGATGAATATGAATTGCTTCAATAGGCCAATGAGTCATGGCAGTTGTTATTCCAACAACGTTCAACACTGGGATGGATGCGGCTGTCCAAATATGCAGCAGCAACAAGACAATCACACGTGTCGACAAATAAACATGCAAAACAGCTATATGGCTAACAATTCCAACCATTACTGCAATAACCATTACAATCAAAATCACCAGAATCACTATAATTGCAACAACTATCAAAATGGGTACAACTGCATGCCTAACATGTCAGAACCCATGCCATCGCCAGCAATGGCTACTCCAGCTCCATCTGAAATTATGAACCCGCCTCAACAGGCCCAAATTATAAGACCGTGTACGCATTATACTCAAAATTGTTATCCTAACACTCTCTACCCTAATCAGTGTGTTCCAAACCAGCACAGTTGCATGAACTGTAAAAAACCGGGATATAATCAGTGTTGTaatcaaaacaatgaaatacAGTGTAATGACGTTAGCCAATCGCAAATGTCGCCAGGTATCGCGAATAACAACGGGACGACGATGCTCGGGATGAGGCAGGACACTTATCAGAGAACTTTAGAATATGTTCAAAACTGTCAGTCTTGGGTTAATAACTCGGACAGTGTTAGTAGTACTACGCACCCTTTAAAAGTTGGCGATAAACCTAATTCTAATATGGTAGTTAATGATATGACATCATCTCTTAGCTCTCTTTTAGAAGAAAATAGATTTTTACAAATGATTCAATAG
Protein Sequence: MHQRMERDFYENVCEHMHEPLCASGLGLSPEYLSARGLTEVHPASTLGSSEFPFSIDGSRLNSPRPGSIRASRKRALSSSPYSDSFDINSMIRFSPNSLASIVNGSRSSSASGSYGHLSAGAISPALGMHPMHLQQLQAHLMRSSGSLLPLPPAAPPPHPMYSLGHHPLHVTHNIKTEILNDRKKSETSTITQLDVDSSSRKSKVKKEPSPNSCGQEGHNDPTDLKDEPGDFIETNCHWKDCSTEFGTQEELVKHINNDHIHANKKSFVCRWEGCSRAEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYTCEYPGCAKAFSNASDRAKHQNRTHSNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYASKKHKGSEQGPDDGPAGLDSSPRSEDMQSHKTTSLSSPSIKSESDVNSPGQHQQGSPLGTTQLAGLGGFNDDLPGDIGGGLVPPDDIPWAYDAEDLEIDELPVVLRAMVGIGGDRGGLAVAERTPRVRMKHLTKGKPTTIPSLNTQRKNIADLNRRITDLKMEGNTGNTQPKTQLTDLQQRLQPSSGNTQAQIRRDSNSTVSSYYGSMRSADMSRKSSLASQASSMRPGIAPGSFYDPISAGSSRRSSQLSTTTTGGTCIPPPPPSHLLAGQLQKLQNSPTSVNNSNLVLQTQNMSLQQTAIQQTWLSSNLSNIPSTTTSTDARRMSEPCHTLIDRKSPPPRPASVSLSPLKGTVNSSELHPNQAVVLDEVGEGEMVENKLVIPDEMVRYLNQVADKQNVMSWSDTNQKPLGSPSQMIPSPSSFTLPSPQNMSPSAISQILPSPSSLNQIMQSPSNNLNQMIPSPSNTQINQMIHSPASNLNQMIPSPAPSNLNQIMHSPASNMSHMMPSPSANLNQMIPSPAAANLNQMMPSPSATNLNQMMPSPASNRNQMMPSPASNLTQMMPSPSANTMKQMMHSPGPHNLNQMMPSPVSNNMSQMMPSPITNMNHGTSSNYQPSNYGMQNNVMQQNNINQIPVRCQSQMMNMNCFNRPMSHGSCYSNNVQHWDGCGCPNMQQQQDNHTCRQINMQNSYMANNSNHYCNNHYNQNHQNHYNCNNYQNGYNCMPNMSEPMPSPAMATPAPSEIMNPPQQAQIIRPCTHYTQNCYPNTLYPNQCVPNQHSCMNCKKPGYNQCCNQNNEIQCNDVSQSQMSPGIANNNGTTMLGMRQDTYQRTLEYVQNCQSWVNNSDSVSSTTHPLKVGDKPNSNMVVNDMTSSLSSLLEENRFLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00736196; iTF_00911475; iTF_00437630; iTF_00912606; iTF_00459328; iTF_01106756; iTF_00330132; iTF_00756189; iTF_00328736; iTF_00057279; iTF_00792551; iTF_01047852;
90% Identity: iTF_00792551;
80% Identity: -