Caur012313.1
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- Hivep1
- Assembly
- GCA_949320105.2
- Location
- OX439473.1:57928013-57949421[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 2.4e-05 0.003 19.0 0.5 1 23 183 205 183 205 0.98 2 8 0.0021 0.26 12.9 4.6 1 21 211 231 211 235 0.89 3 8 0.41 52 5.7 0.1 2 20 393 411 392 413 0.90 4 8 4.3e-06 0.00053 21.4 2.1 1 23 1022 1044 1022 1044 0.99 5 8 3.1e-06 0.00039 21.8 4.7 1 23 1050 1074 1050 1074 0.92 6 8 3.7e-06 0.00046 21.6 1.2 2 23 1556 1577 1555 1577 0.97 7 8 9.6e-05 0.012 17.1 2.4 1 23 1583 1607 1583 1607 0.92 8 8 0.0021 0.27 12.9 2.7 1 23 1625 1649 1625 1649 0.93
Sequence Information
- Coding Sequence
- ATGGAAAATACTGACAGTTACCTGCACAAAAAGTTTAAGAAACAAGTAAATGTCGATGCGAAGATCCAGAAtgacaaagaaaataaaaatgtttcttaCACGGAACAGAACGAGGAAAAAAACGATAAGAAAGAAAACCACAACCAAGTCGACCATCACCTTTACGAAAACGAGAGGTCGGACAATAATAGTGTGCCAAACCAAAGTACAAATAGCTCCTCACTTACAGTAAACGCTAACTTTGTTAAGTCTTCCATATCACTAGGAAACCAACAACCTTCGAACTCTTACATATCATATGTAGTTTCGAAACAATTTGACCATCAACCAGCTAGTTTTGATACGAAATTTAAACCACAGACCAACTATGTAGATAGTATGTCTTCCATTTTAGATACTGTTTATCCTACAGAGAATTACAAGTATACGGAGGAAGCGTATGTTCCGTACCCTCAACACGAAGAATATCCTTCGAGAACTGAAGAGATTCCCGGGTCTAAACCCGACGAAATTCAACCCACTCCTGATAAAAACACTAACGGAAAGTACGTATGCCCTTATTGCAATCTAGTCTGTTCAAAACCCAGCGTTTTGCAAAAACACATTAGAGCTCACACAAACGAAAGGCCGTATCCGTGCGAGAGTTGCGGCTTTTCTTTCAAAACCAGATCCAATCTATATAAACATTGCAGATCAAGAACGCACGCTAATAGATTAATGGGTACCAAATCACAAGATTCTTCTAACGAAACAGACACTCCGAAAACATCTATCTATTCCCCGAATCATTTAAATTCTAAAGAAGACCAACAGAAACCCTACAAACCAAGATTTCATACTACCAAACTATTTGACAATGCATCCGCAGAAAACGCAGAAGAAGAACAACCGGTTATTAACTTCAATCCCACTTCTGAATTCGTGTCTCATCAAATAAACGAGATTATTAATAGGAATAATTTAGTGGTAAGCTCTAGTAATCAATTTATACAAAAAGAAGTTCCTCAGCTCGAATTTAGATATAGCAAAGAACCAGCGTATGAGAGACCAACAGATGAGCCTTTAAACCTGACCAATAAAAATCGAAAACGGTCGTTGAGTGAAGTTTCTGAACCAGTAATACAGAAAAGTTTGATTAAGGAGCTTCTACTCAAAAACCTTTCATCTTCCGATATGCAATGCCCCTACTGTAAGATGATATTTCAGACCGTTACCGAATTGGATGTCCATAAATATAGAAGTTGTAAAGGAAAACCTTCAGGAGCGAAATATACTAGAAGCAGTTCAGTAAATGTTGCTTCCATTTTGACTCATAATAAAAACGCTTTCGATAATATCCCGCAGTTACAAAATACATTCTTCCCTTTGAACTCTCCCGGACCATTTTTAGGAAAAACGCGACTGATAGAAAGCGACAAATCAAAATCGTTCTCTTTCGACAGCGGCCACGCGCCACTTATAAGTCCAGGAGAACCATCACCTTCCCCGAACTATCTTCTCTCACCGATACCTTtcgaaaaagataaaaaaaacaagattaaattaTTTGGTGGCGAAGTTAAAATTCATTTACCTGGGGAGACAAAAAGTTTCAAAATCGATGGTAAAGAAGATAATAAATACGAGCAAGAAAGTAACTATATAGATTATGGTAGCAAACTCAGTGAGAATCGAGTTGTAAAGACTAGCTTGCATTCAGGCGGTACTGTGTTAActaataaaactaattataaacaagaaattaaAACACCACAAGAAGTTATTATGATATCTCCGAATATAGATATagttaattataataaaactaGGTTTACTTTCGAGAAACCTAAcgaaatagaaaaagttccagATGTATTATTAATCCAGCCTACAGAAATACCAAAATCGCCAAAACCTTATCCGGACGAATCTAGCCctctatataaaaatataatggaTTTTAGTCAAAAGGCGATAAGAATGCTAACTCCTAATTTAAGGCCGCCTACTTTTACAGTTTCcagtaaacaaatttttaataatttaaaccaTGAAAACAAGCCTGAACTAAAAATATCGAGTCCCAAACCTAAAATTACAGATACAAACTTCCCCGAGCCTAAACAACCTAATTTATTTAATCCTCTTAACTTATATGTAAATGGAAAAGTTGTAAGACACGTTCCTGGGATGCCTGGACCGGTAGTTGCAGCTGAAACGCCCGAATACAGTAGCAACATAGTAGCAGTTGCAAAAACTCCAACTCCGCCATTAATACTTGATCGACCTCCATTATCATCGAAAATTAACGACCATCATGAACAACCTGATAAATCGGCTGATAGAGTTTTATTTTTGCAACCTGAAAAAGTTCCTGAACGGCCCATTAAATCGCCCAATAACGTActacaagaaaaaattaataagactTCTAATAACTTTTTGCAGCCGGAAAGATTAAGTAAATCGCCGAAATTGGATAATCCTGATTTAGGAACGAAAGCAGCAGTCAGTAAAGTTAGTGATCAGAAATACAGCGAACCGAAATCttctgaagaaattaaaaaatttgccaGACCCAGTAGTTTAGCTCTAAAACCAACTGTAGCATCTTTAAAACAACATCATGGATTAACCCCTACTATGTTCAATCAAATCCTTATAAGTCCTGATACTCCGAGAGTGGCTAAAAAATACGCGGAACATTTTCTTCATGGAAATTACTTCAGTTATTTGGGCTTAAAGAGTTCAACGAGACCTGTATATTGTACTTTAAATAAAACTCAACCATTTTACgtacctttttttaaaaaattgagtaTGTATTCGGAATGGAGGCAGCAGGATACCAAGCAGGATAAATTGTATGCCAGTCAGTATGATTCTAGACAGAAGAACCAGAGGTACAGTGTAGCTGGAAAGACTTCTGCTAACCTTACCATTCATTCTAGTTACAAGttcaGCATTTCCGAAACTTCAAGTCACTCTGAAAAAGAGGATGAACCACAAAAACCGAACGCCATTTTAGGAGGTTATGAAAGCAACGATGATTACATCTATGTAAGAGGCAGAGGGAGGGGTCGTTATGTATGTGATCAGTGTGGAATTCGATGTAAGAAGCCTTCGATGCTCAAAAAACACATTCGAACACATTCAAATGACAGACCTTATACTTGCAGCCATTGTAATTTCAGTTTCAAAACAAAGGGCAACCTAACAAAACACATGAAGAGTAAAGCACATTCCAAAAACTCAACAAACAGTAACGGATCATCTTCTTCCTCAACTCAACAAAGTGCTCAGAGTTCAGAATCAGATACCGATGATAGCGGAATGGACAGTAGTGATGAATCCACAAGACAACAAGAGCATGAAGCAGCTTACGGTTTATTGTCCCTTTCTCAAAAACCAGCTCAAACGACAGATATAGATATATCGCAATTGCGTATAAGCCCTTCCGAAACCTTTATGACAACTGAAGAGATAGCGCACGTTTCGAAAACGAACTAcgccaaaaacaaaatattagacGAACGAAATTCCACTCGTAATTCCTCGTTCAACTCTACAAATTTAGACAAGGTTAATTACGTATTTGCGGCTACAGAAACATCGGAAAGTCagaatataaaaacatatttagGAATGGGGAGCATAAGTAGACCGTTAACGTATCCGTATACAACGATTTCGCCGATAGAAAAAGAGACGATGCCGTCCCCGAAGGTAATTGAAACTGTTGAGTCTGGAGGTTGTTCGGAAAGAGTATCATCCGCTAGCCCTGAGATAAAGTCCATTAAACAATTCCACGTTATCCAAAAATATATGCCGCAACCAAAACTATCGCCCAAAATAACAGAAAATAGCGTTAGAGATAGAAGTTATTCCACAGCTGATAACGTAACGTTAAACAACATTAAAAACACTCCCACTACCACCCCCACTAGACCCCTGCCGACTTTAAAGATAAACGATGTCGTGGTGACAAGTGACAACGTTAGCGATGTAAGGAAAAGAAAATTCTCAGTTTCTGAACCACCCTACAAAAATAAGCTTCGGAGAAACGATGAAGTTATGGATTTATCCATGGCTAATAACCAGGAAAAAGTAGTGAATGGTGGGTTGGCAGAGgagataattttaaacaactttaggCCTTTGATGGAACCCCAGAAGAATGAAACTTTAAGGATAGAACAAAAGAATATCGATAACTTGAGGCCTGTAGAGCATCAGAAGAATGTGGAGGAAGAATTTAGGCCTCTAGAAACGCAGAAAGAAATGTTTAATACGCTTCACAAAGCTCCTCCTCAACGATTCGAAATAAATGAAGATAAAGAAGATAATTTAGTACATAAACCTTCTGAATCTACTAATAATGGTACTGTAATAATCCTGCGGCCTTTACCACAAACCGAAGAACAGGTAAACGTCAACTATCACGACTCTAATGAAGAGTCGATCAAAAGTGGACAATACGACAACAGCGCGATGGAAACTCTTGCGGATATAGCGACGAAGCAAGTGAAGTTGGAAAAAAATACGCTGGCGAAAAGCGTTGCGAGCGAGTTCCTTAAATTGGCTACTAAAAACGAAAATATGGACGGAGGCTGCAGGGATTCTGTTAATTTTGGACCCGTCAATAAGGATGTCAATGAGATTATTGTGAAATCGGAGGGAAACAAAAGTTGTACTATTTGTTCCAAAAGCTTTAACAAACCCTCTCAACTTAGgcTACATATGAATATACACTATTTAGAAAGGCCTTTTCGCTGTGATTCATGTAATGTAAGTTTTCGGACAAAAGGACACTTACAGAAACACGAAAGAAGTGCTAGTCATCACAATAAgtTATCGTCCTCCCCGGCTCTTTCTTCTTCAGAACCTAGACCGTTTAAGTGTTCGGATTGTAGCATAGCTTTCCGAATCCACGGGCATCTCGCTAAGCATTTACGCTCTAAAATGCACATACAGAAGCTCGAGTGCCTAGCCAAAATTCCTTTTGGTCTCTATGCCGAATTGGAGAGATCCAATAGCCTATTGACTGAGATAAATACTTGCGATGGGGACCAGTGCCTTGAAAGTTTAAAGACTTTGGCGAAAAAGGTGTTTATTAACGATCCCAACAAGCTGAACCAGTTAGAGCCGCCAAGGGAAAATATTAGCGCAGAttag
- Protein Sequence
- MENTDSYLHKKFKKQVNVDAKIQNDKENKNVSYTEQNEEKNDKKENHNQVDHHLYENERSDNNSVPNQSTNSSSLTVNANFVKSSISLGNQQPSNSYISYVVSKQFDHQPASFDTKFKPQTNYVDSMSSILDTVYPTENYKYTEEAYVPYPQHEEYPSRTEEIPGSKPDEIQPTPDKNTNGKYVCPYCNLVCSKPSVLQKHIRAHTNERPYPCESCGFSFKTRSNLYKHCRSRTHANRLMGTKSQDSSNETDTPKTSIYSPNHLNSKEDQQKPYKPRFHTTKLFDNASAENAEEEQPVINFNPTSEFVSHQINEIINRNNLVVSSSNQFIQKEVPQLEFRYSKEPAYERPTDEPLNLTNKNRKRSLSEVSEPVIQKSLIKELLLKNLSSSDMQCPYCKMIFQTVTELDVHKYRSCKGKPSGAKYTRSSSVNVASILTHNKNAFDNIPQLQNTFFPLNSPGPFLGKTRLIESDKSKSFSFDSGHAPLISPGEPSPSPNYLLSPIPFEKDKKNKIKLFGGEVKIHLPGETKSFKIDGKEDNKYEQESNYIDYGSKLSENRVVKTSLHSGGTVLTNKTNYKQEIKTPQEVIMISPNIDIVNYNKTRFTFEKPNEIEKVPDVLLIQPTEIPKSPKPYPDESSPLYKNIMDFSQKAIRMLTPNLRPPTFTVSSKQIFNNLNHENKPELKISSPKPKITDTNFPEPKQPNLFNPLNLYVNGKVVRHVPGMPGPVVAAETPEYSSNIVAVAKTPTPPLILDRPPLSSKINDHHEQPDKSADRVLFLQPEKVPERPIKSPNNVLQEKINKTSNNFLQPERLSKSPKLDNPDLGTKAAVSKVSDQKYSEPKSSEEIKKFARPSSLALKPTVASLKQHHGLTPTMFNQILISPDTPRVAKKYAEHFLHGNYFSYLGLKSSTRPVYCTLNKTQPFYVPFFKKLSMYSEWRQQDTKQDKLYASQYDSRQKNQRYSVAGKTSANLTIHSSYKFSISETSSHSEKEDEPQKPNAILGGYESNDDYIYVRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHSNDRPYTCSHCNFSFKTKGNLTKHMKSKAHSKNSTNSNGSSSSSTQQSAQSSESDTDDSGMDSSDESTRQQEHEAAYGLLSLSQKPAQTTDIDISQLRISPSETFMTTEEIAHVSKTNYAKNKILDERNSTRNSSFNSTNLDKVNYVFAATETSESQNIKTYLGMGSISRPLTYPYTTISPIEKETMPSPKVIETVESGGCSERVSSASPEIKSIKQFHVIQKYMPQPKLSPKITENSVRDRSYSTADNVTLNNIKNTPTTTPTRPLPTLKINDVVVTSDNVSDVRKRKFSVSEPPYKNKLRRNDEVMDLSMANNQEKVVNGGLAEEIILNNFRPLMEPQKNETLRIEQKNIDNLRPVEHQKNVEEEFRPLETQKEMFNTLHKAPPQRFEINEDKEDNLVHKPSESTNNGTVIILRPLPQTEEQVNVNYHDSNEESIKSGQYDNSAMETLADIATKQVKLEKNTLAKSVASEFLKLATKNENMDGGCRDSVNFGPVNKDVNEIIVKSEGNKSCTICSKSFNKPSQLRLHMNIHYLERPFRCDSCNVSFRTKGHLQKHERSASHHNKLSSSPALSSSEPRPFKCSDCSIAFRIHGHLAKHLRSKMHIQKLECLAKIPFGLYAELERSNSLLTEINTCDGDQCLESLKTLAKKVFINDPNKLNQLEPPRENISAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -