Basic Information

Insect: Crepidodera aurea
Gene Symbol: zfh1
Assembly: GCA_949320105.2
Location: OX439474.1:63792116-63811622[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.075 9.5 8.0 0.7 2 13 96 107 95 117 0.84

2 17 0.25 31 6.4 0.9 1 23 123 145 123 145 0.94

3 17 0.00024 0.031 15.9 1.3 1 23 151 173 151 173 0.90

4 17 1.1e-05 0.0014 20.1 1.7 1 23 179 202 179 202 0.97

5 17 0.0033 0.41 12.3 3.8 1 23 214 237 214 237 0.96

6 17 6.6e-05 0.0083 17.6 0.2 2 23 247 268 246 268 0.97

7 17 3e-05 0.0037 18.7 3.5 1 23 274 296 274 296 0.97

8 17 0.00059 0.074 14.7 0.4 1 20 302 321 302 323 0.93

9 17 0.016 1.9 10.2 0.8 3 23 359 379 358 379 0.98

10 17 0.01 1.3 10.8 2.0 1 23 385 407 385 407 0.98

11 17 0.0045 0.56 11.9 1.9 2 23 411 432 410 432 0.91

12 17 5.4e-05 0.0068 17.9 1.3 1 23 438 461 438 462 0.97

13 17 0.00037 0.047 15.3 1.9 1 23 473 496 473 496 0.95

14 17 7.5e-06 0.00095 20.6 0.7 3 23 507 527 505 527 0.97

15 17 4.3e-05 0.0055 18.2 1.9 1 23 533 555 533 555 0.98

16 17 0.00017 0.021 16.4 0.5 1 23 561 583 561 583 0.98

17 17 1.9e-06 0.00023 22.5 1.1 1 22 589 610 589 610 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.075	9.5	8.0	0.7	2	13	96	107	95	117	0.84
2	17	0.25	31	6.4	0.9	1	23	123	145	123	145	0.94
3	17	0.00024	0.031	15.9	1.3	1	23	151	173	151	173	0.90
4	17	1.1e-05	0.0014	20.1	1.7	1	23	179	202	179	202	0.97
5	17	0.0033	0.41	12.3	3.8	1	23	214	237	214	237	0.96
6	17	6.6e-05	0.0083	17.6	0.2	2	23	247	268	246	268	0.97
7	17	3e-05	0.0037	18.7	3.5	1	23	274	296	274	296	0.97
8	17	0.00059	0.074	14.7	0.4	1	20	302	321	302	323	0.93
9	17	0.016	1.9	10.2	0.8	3	23	359	379	358	379	0.98
10	17	0.01	1.3	10.8	2.0	1	23	385	407	385	407	0.98
11	17	0.0045	0.56	11.9	1.9	2	23	411	432	410	432	0.91
12	17	5.4e-05	0.0068	17.9	1.3	1	23	438	461	438	462	0.97
13	17	0.00037	0.047	15.3	1.9	1	23	473	496	473	496	0.95
14	17	7.5e-06	0.00095	20.6	0.7	3	23	507	527	505	527	0.97
15	17	4.3e-05	0.0055	18.2	1.9	1	23	533	555	533	555	0.98
16	17	0.00017	0.021	16.4	0.5	1	23	561	583	561	583	0.98
17	17	1.9e-06	0.00023	22.5	1.1	1	22	589	610	589	610	0.96

Sequence Information

Coding Sequence: ATGGGTCGTTGTGCTTCTTTTGGGTGCAAAGAAATGGGAGTTTATAAGTTTCCTAAAGATCTTGTTATCAGGAGAAAGTGGGAAAAAGCTTTGAGAATAGTAAAGTTTAATAGTACTGATTATTCTAGGATAAGACAGAAACGGAAATATACAAAGAGGAAAACGAAAAAAGAAAACGACGATTCCGAGATCAAACAGAGTGATAAAAAACGTAAAAGTCTAAATAGAATTACAGCCCGACACCCGCAACTACTAGCACAACCCATAGAATTAGACGATCCAATAGAATGCAAAGAGTGCAacaaagaatttaaaaataatctagaTTTTGGTTTCCATTCAAAAGAACACGACCCCGAAGGAAAGTACAACTGCCACATCTGCGATTACACAAACATTTCTAAACCTCCTTTCGATCTACACATGCGGGAACATGAAGGTATTCATAAGTACAAGTGTCCAATGTGTCCGAAAACATTTAAGCAAAGTAAAGACGCAGCAGAACACAAATACTTTCACACAGGAGAAAAACCTTTCCAGTGTGAAATTTGCGGAAAACACTTTCCTTACACCAAAAGTTTGGCAGCTCACCGACGCAATACTCATTACGAAATTATCACTGGAAAGCCGTTACAAAAATACGACTGTAAAGTATGTAATCGCCATTATGAAAGCCATTCTGGTCTAGTACGCCACTACTCTTCAAGCCACAAAGAACTAGGCTACGACTACTCTGTCGTTTGCGACATTTGTGGTAAAACCATAGCTACCAGAAACAAACTTAAATATCATTTAAGAGTCCACACTGGTTACAGACCACACGAATGTAACGTATGCCATAAAGGCTTCTCCAAAAAGCAAGAACTTAAGATCCACGAAAGGGTCCATACTGGAGAAAAACCTTTTACTTGTTCTTATTGTGGTAAAAAGTTTGCACAGTTGGCTCCCTACAGGAACCACAAGGAATtgaaaaactcaaaaaagaaaaagtcTTCCATTCCAATAACAGAACCAGAAATTGATGAAACGATTACAGGACTAAGCGCCATCCTTAAAATCGACAAACCCTTATTATGTCCCTCCTGCGAATATGTATTTACCTCACATATAGATTTAGCCTATCACTCAAAAAAGCACAACGAATCCAAACTTTACACCTGTCATTTGTGTGATTTTTCGGTAGCAACGAAATTTAGAATTAGAAGGCACATCAATGGACACGCTGGATGGAGATGCGATCATTGTAATAAAGTTTTCAGAAAATCCAGAGCGGCTCTAAAGCACTCTTATATACATACAGGCGAAAAAATGTACCAGTGCGAAATTTGCGGTAAACATCTAGCTAACGCCAAAAGCTTGGACACCCACCTTAACACTATACACCACGAAATTATCACCGGCAAACCTCTAGTCAAATTCGATTGTCCCATATGTAAAAAACACTACGAATCTGAAACGGGCTTAAGGAGACACTACTCAAGCTCTCACAGAGAAATGGGAGTTGATCTTACTGTGATCTGTGAGGTTTGCGGCAAAAGAATTTCGAACAGAACCCGCTTAACCCGTCATATGAGGACGCACAATGGAGAGAAACCCTTTCCTTGTTCGGTGTGCAGTCGCAATTTTGCGACGAAATGCCTATTGACATCGCACTTGAGGGTCCATACTGGGGAGAAACCATATATTTGTTCGTTTTGTGGTAAAAGATTTGGCCAATCCGCTCCTTATAGGTACCATATTAAGATCCATACAGGGGATCGAAGGTATCATTGTAAGTTATGTGGAAAGGCGTTTATTTCAAATAGTAATCtcaaaattcatacaaaaactTGTTGTGCACCAATTAGGGATTAA
Protein Sequence: MGRCASFGCKEMGVYKFPKDLVIRRKWEKALRIVKFNSTDYSRIRQKRKYTKRKTKKENDDSEIKQSDKKRKSLNRITARHPQLLAQPIELDDPIECKECNKEFKNNLDFGFHSKEHDPEGKYNCHICDYTNISKPPFDLHMREHEGIHKYKCPMCPKTFKQSKDAAEHKYFHTGEKPFQCEICGKHFPYTKSLAAHRRNTHYEIITGKPLQKYDCKVCNRHYESHSGLVRHYSSSHKELGYDYSVVCDICGKTIATRNKLKYHLRVHTGYRPHECNVCHKGFSKKQELKIHERVHTGEKPFTCSYCGKKFAQLAPYRNHKELKNSKKKKSSIPITEPEIDETITGLSAILKIDKPLLCPSCEYVFTSHIDLAYHSKKHNESKLYTCHLCDFSVATKFRIRRHINGHAGWRCDHCNKVFRKSRAALKHSYIHTGEKMYQCEICGKHLANAKSLDTHLNTIHHEIITGKPLVKFDCPICKKHYESETGLRRHYSSSHREMGVDLTVICEVCGKRISNRTRLTRHMRTHNGEKPFPCSVCSRNFATKCLLTSHLRVHTGEKPYICSFCGKRFGQSAPYRYHIKIHTGDRRYHCKLCGKAFISNSNLKIHTKTCCAPIRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -