Basic Information

Insect: Crepidodera aurea
Gene Symbol: Zfa
Assembly: GCA_949320105.2
Location: OX439479.2:5234430-5242173[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0089 1.1 10.9 3.6 3 23 148 168 146 168 0.97

2 16 0.0041 0.51 12.0 2.9 2 23 175 196 174 196 0.96

3 16 0.0022 0.28 12.8 0.2 1 23 203 225 203 225 0.96

4 16 0.00013 0.017 16.7 1.0 1 23 323 345 323 345 0.99

5 16 6.1e-06 0.00077 20.9 6.8 2 23 352 373 351 373 0.97

6 16 0.0016 0.2 13.3 4.6 2 23 397 419 396 419 0.93

7 16 2.1e-05 0.0026 19.2 2.5 2 23 496 517 495 517 0.96

8 16 0.0011 0.13 13.9 0.9 1 23 523 546 523 546 0.92

9 16 1.6e-06 0.0002 22.7 0.8 1 23 551 573 551 573 0.98

10 16 9.9e-07 0.00012 23.4 2.2 2 23 584 605 583 605 0.97

11 16 1.3e-07 1.6e-05 26.2 0.9 1 23 612 634 612 634 0.97

12 16 2.9e-05 0.0036 18.8 1.6 3 23 646 666 644 666 0.92

13 16 9.5e-05 0.012 17.1 4.4 1 23 672 694 672 694 0.99

14 16 4e-05 0.005 18.3 1.7 1 23 700 722 700 722 0.96

15 16 6.1e-07 7.7e-05 24.0 0.4 1 23 728 750 728 750 0.99

16 16 0.00014 0.017 16.6 0.1 1 23 756 780 756 780 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0089	1.1	10.9	3.6	3	23	148	168	146	168	0.97
2	16	0.0041	0.51	12.0	2.9	2	23	175	196	174	196	0.96
3	16	0.0022	0.28	12.8	0.2	1	23	203	225	203	225	0.96
4	16	0.00013	0.017	16.7	1.0	1	23	323	345	323	345	0.99
5	16	6.1e-06	0.00077	20.9	6.8	2	23	352	373	351	373	0.97
6	16	0.0016	0.2	13.3	4.6	2	23	397	419	396	419	0.93
7	16	2.1e-05	0.0026	19.2	2.5	2	23	496	517	495	517	0.96
8	16	0.0011	0.13	13.9	0.9	1	23	523	546	523	546	0.92
9	16	1.6e-06	0.0002	22.7	0.8	1	23	551	573	551	573	0.98
10	16	9.9e-07	0.00012	23.4	2.2	2	23	584	605	583	605	0.97
11	16	1.3e-07	1.6e-05	26.2	0.9	1	23	612	634	612	634	0.97
12	16	2.9e-05	0.0036	18.8	1.6	3	23	646	666	644	666	0.92
13	16	9.5e-05	0.012	17.1	4.4	1	23	672	694	672	694	0.99
14	16	4e-05	0.005	18.3	1.7	1	23	700	722	700	722	0.96
15	16	6.1e-07	7.7e-05	24.0	0.4	1	23	728	750	728	750	0.99
16	16	0.00014	0.017	16.6	0.1	1	23	756	780	756	780	0.93

Sequence Information

Coding Sequence: ATGATAAATAAAGAATCGGATCTAATGATTGATAAAATATGCCGCTGCTGCATGTGTGAAAATGAAGACATGCAAAATATGTTTGAGAAGAACAATGAGGAGGGTACTGGCGATCCTAAAGCTCTTCTCTCTGAAATGCTTGGGGCTTGTGCTTCTATAGAGgtTGCTTCCGGCGATGGTTTGCCTAGTAATTTATGCAAAGGTTGTGAGGAAAAGCTTAAAAGTGCCTATGAGTTCAGAAAGTTGTGCCAAAAATCTGATACAACTTTAAGGGACTTAACTCAAGATAGTAAGAAGAATGTACGTCAGGAAGAGGATATAGTTGTTCACCCTGATGTTCATGATGATGTTTTTGATGATGAGGATAATGTGCCTCTACTGGAAAGGGGCATCAAAAGAAAAAGGGGTCGGCCTAAAAAGAAGGGAACTAACAATTTGGCTTGCCACTTTTGTCATAAGATACTTCAGACCCAAAAAGGCTTAAGAGTACACTTGAGATCTCATActggagaaaaattaaaatactgtATGTTTTGTGATGCAAAATACACAAGAACTAATCATCTAATTCGACATATTAGTACACACGATAAACCTGGTTTGAAGCACCCTTGTGAGAGTTGTGACAAGGTATTCGATGCTGCTGCTGAGTTATATCGTCATTCAAAAGTTCATGAAGAAATTACAGATGAGACTATCAAAGAACAGGACATCAAAACTGAAGCTGcagaaataaaaactgaaattgATGAACCTGTACTTGTAGGCCATCAAATGGTTGGGAAGGAGGAAAATGAAACAGCACACAGtgATGCAGATGATAATGGTTTTAATGATTTCCCTGTGAGTGATGGAGGCTACGATGATAGTGATGAAGATTTTGCAACTACATTGGACAATGACAAGAAGAATAAAAGTCCAAAGACAAAGAAAAGGGAGCGTATGGAGGAAAAAGATAAAGCGCTGTATCAATGTAAGGAATGCTCTAAAGTAATGACGACCTATATTGGACTTAAAATTCACATGAGAAAACACACTGGTGCTGATTTGTCTACTTGTCACttatgTAACAAATCTTTTACCAAAAACAGTCATCTTGTAAGACATTTAAAGACTCATGGAATAGTTGATGAAGAAAAAATGAAGGCTTTGAAGAAATATTCAGATTCTAAAggaaaaaagGTTATGGAATGTGATTATTGTGACAGAAAGTTCAAGTATCGGAAAAGTTTTCTGCATCACATGCACGCCGAACATGGTATGTCCGATTTCGATAGCGATTTTGAAAAAGGAGAAGGAGCTGATAAAGGCAAAACAGCGGATCAAACCGAAGACGGTGACGGAACTCAAAAGGAAGTCACCGACAACATTGATATATCTAAAATTGGTTTAGCTGATAATCCTTCCAAGGatgaggaagaagaagaagtcgGAATTCCTGACGCTGAAAATCTATTTGTAAAGAAATCACGCAGCAAAAACCAAGTGTGTCACGTATGTGGTGCCTCTTTTTCAAGAGTAAATCATCTTACTAGACACATGACATTACATCGAGCGGTTCTCGTTCACCAGTGCGACAGGTGTGAGAAAGCCTTTGCGACAGATGAGCATCTTAAAATTCACGTCGAAGAAGAACACATAAATAAACCTTATGTGTGTACAGTATGTAATAAACCGTTTAGCAGGGGTGAACACCTAATTAGACACTTGAAAGTACATCAAAATAATTCTGAGAAGGATGCTAATTTGAAATGTTCAATATGTGATACAACGTTTTCAAGatCTGATCATTTGGCTCGTCACACGAAAATTCACTTACTGCAAGACAAGAGGCACGTTTGCGGCGAATGTGGCAAGGCGTTCAACCGATTGGACAATTTGAAGACCCACCAGCGTATCCACACCGGCGAAAAGGACACATCGAAATTGCATTTGTGCATTTACTGCGGAAAGGAATTCAATAATTCCAGTAACATGATCGTTCACATGAGACGTCACACCGGCGAAAGGCCTTACAAATGCAGCGAGTGCGGCAAAGGATTCCCGAGATCGCACGATTTGAAATGTCACGAACGGACCCATTCCGGTGAAAAACCATATCTATGTACGCTTTGCGGCAAATCGTTCAATAAGAGTAACAAATTGCTTCGTCACAGTAGAGTCCATACTGGAGAACGTCCATACGTATGCAACATTTGTAGTCGCGCATTCACCCAATCCAACGATCTGGCGCTGCACATGCGCAGACATACCGGCGCTCGACCGTACGCTTGCGGTGTATGTCCCGCGCGATTTATACAATCCGGACAGTTGAAGACCCATAGAAGAACCACCGGCCATTGGATGGACGTTCAACCAGATCTAAAGGGAGGACATCGAGTTGAACCGGTGACGCCTGCACACGAACCTGCTCCGATTAGGTTTAAAGTTCACAGaACAATGAAAAAGGAACAGAACATTCTGGAGCAAGCCGGTTTAATGACGACCCAAGCATCAACTTCCGAAGGCGTAAATCTCGGTGAAGTACAACCCATGCAGTCTGAACCTCAAAGGATACTAATGGGTATTATGGGTAACCTTAAAATCCCTGGAGCCGATGCTTCAGTCCAACCTCTACTTATCGATAGTGCCAAGTTGGCAGAATTGCACAATGCAGGCTTGGTAAACTTGCCAACGGTAATTCAGGCAACAAATGGAGACGAAATCAAATTAAAATCAGAAGTTGGTAGTTACGGTATCACTCAATGTGAAGAGGAGATGGAAAAACCGGAGGTTAATACAACTGGACCTTATCAGGACGAGGTCGTTATTTATTCAAGCGTTGGACACACATCAACGACATACACCACTAgtgaaaatttcaattttcaaagttttcacTAG
Protein Sequence: MINKESDLMIDKICRCCMCENEDMQNMFEKNNEEGTGDPKALLSEMLGACASIEVASGDGLPSNLCKGCEEKLKSAYEFRKLCQKSDTTLRDLTQDSKKNVRQEEDIVVHPDVHDDVFDDEDNVPLLERGIKRKRGRPKKKGTNNLACHFCHKILQTQKGLRVHLRSHTGEKLKYCMFCDAKYTRTNHLIRHISTHDKPGLKHPCESCDKVFDAAAELYRHSKVHEEITDETIKEQDIKTEAAEIKTEIDEPVLVGHQMVGKEENETAHSDADDNGFNDFPVSDGGYDDSDEDFATTLDNDKKNKSPKTKKRERMEEKDKALYQCKECSKVMTTYIGLKIHMRKHTGADLSTCHLCNKSFTKNSHLVRHLKTHGIVDEEKMKALKKYSDSKGKKVMECDYCDRKFKYRKSFLHHMHAEHGMSDFDSDFEKGEGADKGKTADQTEDGDGTQKEVTDNIDISKIGLADNPSKDEEEEEVGIPDAENLFVKKSRSKNQVCHVCGASFSRVNHLTRHMTLHRAVLVHQCDRCEKAFATDEHLKIHVEEEHINKPYVCTVCNKPFSRGEHLIRHLKVHQNNSEKDANLKCSICDTTFSRSDHLARHTKIHLLQDKRHVCGECGKAFNRLDNLKTHQRIHTGEKDTSKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKTHRRTTGHWMDVQPDLKGGHRVEPVTPAHEPAPIRFKVHRTMKKEQNILEQAGLMTTQASTSEGVNLGEVQPMQSEPQRILMGIMGNLKIPGADASVQPLLIDSAKLAELHNAGLVNLPTVIQATNGDEIKLKSEVGSYGITQCEEEMEKPEVNTTGPYQDEVVIYSSVGHTSTTYTTSENFNFQSFH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00792375;
90% Identity: -
80% Identity: -