Basic Information

Insect: Crepidodera aurea
Gene Symbol: -
Assembly: GCA_949320105.2
Location: OX439472.1:33318508-33329327[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.3e-15 1e-11 45.8 2.1 1 44 7 50 7 50 0.97

2 10 8e-11 3.6e-07 31.2 0.9 1 44 189 232 189 232 0.97

3 10 1.2e-15 5.4e-12 46.7 0.6 1 44 282 325 282 325 0.98

4 10 2.2 9.9e+03 -2.2 0.0 16 26 461 471 457 473 0.82

5 10 0.0037 17 6.7 2.1 11 32 498 520 493 526 0.79

6 10 0.34 1.5e+03 0.4 3.3 5 28 521 545 517 557 0.79

7 10 0.0086 39 5.5 5.0 15 38 560 584 548 585 0.77

8 10 0.00051 2.3 9.5 0.2 18 43 598 625 589 626 0.71

9 10 0.15 6.5e+02 1.6 5.1 18 41 626 646 620 647 0.88

10 10 0.067 3e+02 2.7 0.6 18 40 654 673 652 675 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.3e-15	1e-11	45.8	2.1	1	44	7	50	7	50	0.97
2	10	8e-11	3.6e-07	31.2	0.9	1	44	189	232	189	232	0.97
3	10	1.2e-15	5.4e-12	46.7	0.6	1	44	282	325	282	325	0.98
4	10	2.2	9.9e+03	-2.2	0.0	16	26	461	471	457	473	0.82
5	10	0.0037	17	6.7	2.1	11	32	498	520	493	526	0.79
6	10	0.34	1.5e+03	0.4	3.3	5	28	521	545	517	557	0.79
7	10	0.0086	39	5.5	5.0	15	38	560	584	548	585	0.77
8	10	0.00051	2.3	9.5	0.2	18	43	598	625	589	626	0.71
9	10	0.15	6.5e+02	1.6	5.1	18	41	626	646	620	647	0.88
10	10	0.067	3e+02	2.7	0.6	18	40	654	673	652	675	0.79

Sequence Information

Coding Sequence: aTGTCTACTCCGCGGAGATCAGCAATTTGGAATGTATTCACCGAAACGCATAAAACAGACTATATCGCTACATGTAATATTTGCTCACAGGAGTTCTCTTATAGGTCCACAACTACAAACTTAATGAAACATCTTAAAAGGAAACATCCTGGAGTCagtttaaattcaaattatcgTCAAGATAAGCATAAAGAAGTTGAAATAGTAATAGAGAGACAATTAGAAAACGAATGTGAGATAGAATCTTTTAAAGTTGAAGTTAAACCTGCTTCTGAAGAAGATATTGGAGATTGTATTGTCTTGGGCAGTGGAAAACATGTATCACCGGATTCTTCTCAAACTCAAGAAGTGCCTGAACATGAACTACAACCCAGTTTTAATCCTCCTGAAGATtttgaaaacattgaaaataatcCCAATCCTCCAGCAAACAACTCTGATGAGTTAGAAGATGATGATTTTTGGAATGTCCAAGACAGCTCTGATAATGATCCAGAATTTAGGCCCTCTCCAGAACCTGAAGATGAATTTGAGTCTAAGGTGCAAAACTCCTTCAAAAAAAGGTCCCAGATATGGAATGTATTTACAGagAAACCAGGTAGTGATTACATAGCTTTTTGCAATGTCTGCAATCAAGAATTTTGTTATAGAAGTACAACAAATAAtcttaaaaaacattttcaaagaaaacACCCAACTTTAAGTATGGAACAAAAAATAGCTCTAGTTAAACATGAAACAAATCTTCCTGAAGGAAAGTATCACCTTAAAGTAAAAAATGATTCATCGGATGATGAAATGGATGATATAGATGAAGaggaGAAAAACACTAAACGGAAACCTTCACAAATTTggaattattttacaaaaaagaaaCCTGGCGAATATGTAGCTACttgtaatatttgtaaaaaggAATTAGGTTATAGAACGAcaatatcaaatttaaaaaaacatttagatAGAAAACACCCACATATAGAAATTGTCAAGACGGAGGAAGCTGAGGAACCAAGAGGTaCAACACCCGAAGTTCCGGTAAAAACATGTTTGATATGCTTACAAAATGATGAGAATGAAAGCAAAGAATTTATTCATGTTAATAGTAACGATCCAGAAGAAAAATCCTATATGattaaaatacaagaaataatgAATCAACCAGTGGTTATAGATGATTCCCATGTATTATGCCAACCTTGTATCGCGGATTTAGAAAGGGTGTTGCAgtttaaagataaaataataaaGGCTTTCGAATTTTGGAGTAAAATTGAACCCGAACCAGAACCTGAGCCGGAACCAGAGTCAGTTGACGTTTCTGCAGATGACGGTAATCACACGGATTATTCTGACTTAGAGGATGGTGAAAGTTTGGCGAAATTTACTTGCACGAAGTGTCAAAGAGTATTCCCCTCACCTTCCGTTATGCTCAAGCATAATTGCGATCGACATAAAAAAGAAAGATTAGTCCAAAGGAGGATGAAAATCAACACTAGAGACAATAAATTTTATTGTGAACATTGCGGAAGAGGGTTCTCTATTAAATGGAAGTTAACAAAACACGTGAAGAAGTGTCCAAATATTTCGTCTAAACTTTTTATCTGCAGcatgtgtaatagggagtttaaAAAAGCTTATCATTTAAGAGAGCATATGGCATCTCACACGGGAGAACGTAACTATAGCTGTAATCTCTGTGGCAAGACATTCCAAAGatCGTCTTCTAAGCATAAACACATGCGAAGCCATAATGCAAAACCCggagaaaaatctaaaaaaactccATTTTTATGTACTATATGCGGGAAGAGTTTTCCTTATTCCAATGGGGCTTCTAGACATATGAGGGTACATTTGGGGGAGAGGAGGCACGAGTGTCACATTTGTTTGAAGAGGTTCAGCCAGACTACGCATCTGAAGgttCATTTAAGGACTCATTCAGGAGAGAGACCTTACAATTGCTTAATTTGCGGTAGAACCTTTTCATTAAATGCCAGTTTAAGGAAACACATGAGATTACACGTTGGTTCCGGAGAATTCGTCAAATTGGTCAAAAATTTGGAAACCAATTTGGACACCAACATGGAGGAGAATCTCGGAAACAATCTTACCGCAAATCTAACCACAACTCTGGCTGCAAATTTGGGGGTTATAGAGACCAATATGGCGGGTAGTTTGGATGACAATTTAGAGGACAATATAGATGATGACTTAGAGACCAATATCGCACATGCCGATGTTGTAACGGAAGATGGGATTCACGTTTTAACACATCACGACATTACGATGGAGGATAATCAATGCGCTGCCTAG
Protein Sequence: MSTPRRSAIWNVFTETHKTDYIATCNICSQEFSYRSTTTNLMKHLKRKHPGVSLNSNYRQDKHKEVEIVIERQLENECEIESFKVEVKPASEEDIGDCIVLGSGKHVSPDSSQTQEVPEHELQPSFNPPEDFENIENNPNPPANNSDELEDDDFWNVQDSSDNDPEFRPSPEPEDEFESKVQNSFKKRSQIWNVFTEKPGSDYIAFCNVCNQEFCYRSTTNNLKKHFQRKHPTLSMEQKIALVKHETNLPEGKYHLKVKNDSSDDEMDDIDEEEKNTKRKPSQIWNYFTKKKPGEYVATCNICKKELGYRTTISNLKKHLDRKHPHIEIVKTEEAEEPRGTTPEVPVKTCLICLQNDENESKEFIHVNSNDPEEKSYMIKIQEIMNQPVVIDDSHVLCQPCIADLERVLQFKDKIIKAFEFWSKIEPEPEPEPEPESVDVSADDGNHTDYSDLEDGESLAKFTCTKCQRVFPSPSVMLKHNCDRHKKERLVQRRMKINTRDNKFYCEHCGRGFSIKWKLTKHVKKCPNISSKLFICSMCNREFKKAYHLREHMASHTGERNYSCNLCGKTFQRSSSKHKHMRSHNAKPGEKSKKTPFLCTICGKSFPYSNGASRHMRVHLGERRHECHICLKRFSQTTHLKVHLRTHSGERPYNCLICGRTFSLNASLRKHMRLHVGSGEFVKLVKNLETNLDTNMEENLGNNLTANLTTTLAANLGVIETNMAGSLDDNLEDNIDDDLETNIAHADVVTEDGIHVLTHHDITMEDNQCAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00387568;
90% Identity: iTF_00387568;
80% Identity: iTF_00387568;