Basic Information

Gene Symbol
-
Assembly
GCA_949320105.2
Location
OX439476.1:21422556-21457055[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.7 4e+03 -0.8 0.0 3 17 183 197 182 199 0.91
2 7 0.059 1.4e+02 3.8 0.0 22 45 256 281 249 282 0.86
3 7 1.1e-06 0.0025 19.0 0.1 3 34 290 323 288 335 0.89
4 7 1.2e-08 2.7e-05 25.3 0.1 1 46 341 390 341 390 0.97
5 7 2.5e-07 0.00059 21.0 0.0 1 45 397 441 397 442 0.96
6 7 0.00013 0.32 12.3 0.4 4 43 451 492 450 495 0.93
7 7 1.3 3.1e+03 -0.5 0.1 18 38 1659 1678 1657 1679 0.84

Sequence Information

Coding Sequence
ATGGACGATGAAGCCGATTTAAAGAAAATGATTGAAGTGCTGAAAAGCACTAGAGAAgaGAATGCAGAAGACCTTCAGTTTCAAGAATTTATTAACTTCGATGATAGTGATGGAGATGAAGATGATGAATACACTACACAAGATTTGGATTTGGAGAATAACTTTAATCTAGATATTTCAACGTTATACAAATACAACACCATATCTTCCCTAAAACCCGAGGAAAAGGCTGTCATAGATTCCTGCAGAGACcgtgatttgaaaaaattactgttACTTAACCGTAAACAAAATATGCAGCTCATCCAACTGTACAAAACATTCAAAGATCTTCTTATAGAATGCAAGCAAAATATCTTAGAAAAAAATGAGATTGTTAAACAGTATTTCGAAGCTTTTAGAACACAGAGACAATCATCAGGTTCTTGGAGGGTAGTTGCCCCTTATTTTAAAGACAAAGGTTTCTATGTCAGTCCTCCTAATAGTGAtactataaaaaagaaaaataacaaaGAATTATCTTATTACGACCTTATGCCTTTGAAAAAATGGAGTAAATACGAGTGTGATAGACTAGTCCGCGCCGTCAAATCAAATTACGTAAGTAATGTCATTCTTCAACTTAAAAAAGAAATCAGAATGATTAAAAGTGGAGAAGCGACAGAAGATGAAAAAGAAGAAGTGAAAGAAAAGCAGACGAGGTTGAATAGATTAAGTAATCCTGAGTATTCTGAAATACCTCCCTTGGGCTctgatgaaaatattaattggaTAAGAGTGGCGGATGTTTTTATTAGAGATAAGCACTCAGATTTTGAATGTCGTTCTTTTTGGCACATATATCTGCATCCCTCTGTGAATAAAGCTGTCTGGCTTGCAGAAGAAAACAATAAATTGAAGGAATTGGCAAAAAAACATAAGTACCAAAATTGGGATCTGATCGCGAAGGACCTGGATACGAACAGATCATGTTTTACTGTCGCTaggcaatatttttcaaatttgtatACTACTCATAAAAAGGGGGAATTTACAATCGAAGAGGATAGAAAACTTTTAGACTTGGTTAGTAAATATAGAATTGGTGATCACATACCATGGGTACAGATTGTTCGACATTTTAAATATAGAACCAGATGCCAATTGCATCATAGATTTACTTATTATTTGAGTCAAGTCGACAAAAGAAAAGGTAAATTCTCCGAGGCGGAAGACGTTATGATCCTACTAGTAGTCGCAAAACATGGTATTAATTATCGAAAATGTGCAGAGTATTTAACCGAAAGATCTATCAATCAAATAAAAGGAAGatacACTTCAAATTTACGTggacttttaaataaatatatatggaGTGTAGAAGATGATGAAGCCCTAATGGAACACGctaaaaaaaacgataaaaaatctcaACTCTGGGGTGAACTTACTTCGAAACTTAAAAGATCTAGGGGACAAATTAGACAGCGTTACATCGTTGTCAAGAATTTTTTGGATCAGAATCCTGGGTCTACAATACGCGATGTGACACGAAGAAAACACAAACATAAATCAGAAGATTCCTATTGTACAGTCAGACGAGTAGcagattattttttagaaaagagcGAAGATATTCCCTCAATTGAAGAAATCGAAGAAGAGCTCCGACAATACCACTCAGAACCTTCCTCGTTTGTACCAAAAGTCGAATCAACGGAACACGACAACGTAAAAATAGAACATAACAGCAACAACATAGACGATCTGCTAACAGAGTTTTTCTGCAATAGTCACATGCAACCGGGCGTGATACTCAACGCTGAGAATCTGAAACAAGCAGTAGACGAAGTGGAATCACTTTTAGACATATTGAACATCAACTTGGTAATTCCACACCATCTTGACGATAGTCATTTAGATTATATAGACATGGAAATTATAGGAGAATTAAGAAAAAGAAAGAATTTCAACAGGAGCGGCGGGAAAGAGATAAAACGTTTGGTACCAGCGAGCTTTCATACTGCAACAACAATGAGAAGTTTACTGGTGAAATATTTGCATTACAAAAACGAGAAAATAGCAAAGAAAGAGATTGTGCCGTACAAAGACGAGAAAATATTCGGGAATTTTGACGTTTATTCAAATGCCAACTGCAGCAAAGCTAAAACGTTAATAACCGAAGAAACGTCATGTTTGACAGACTTAGAAAAACGAAAATTACAAGCAGACAGGAATTTATTTTACCGACGCTTTCTGTCGCTGTTAAATTGGCCGGCGATTTTGACGCTCGAACCGCCATCTAGAGATTTCGCCAGTATCATGGAAAATATTAGTATCGACAGCCGACCGCCCCCGAAGAGAACGTacagtagaaaaaataaaagcgaagaCGATCGCGCGAGCAAAGTTCGAATTTTGGACGAAAACGTAACGCAATCTTTACAACTAACGCCGGTTACGGATAAAAGCGTTATCGTTAATTTACTGAAGGATaatagcaaaaaattattttgcatgGATAAAGTCCAATTCGGGACTCAAACTAAGACCTTTTTAAAGGAGGTTGATTTGGATTTTTTAACGAGGAAGGGGAGCGATACGGGCTCTGCACCCACGACGCAAACTTATTCTAataaaaggaaattaaataatgtcacGCTTGAAACTCCTGGTACATCAAAATTTAAGGGTGATCCGAATTCCATAGAAGATAATTATGATGTGCCCTCACATCCACCTCAAATAATTGCAGTGCATAGTGGATTGTGGATATGTGAAGGGAAATTTTTAGTTCAATGTAAATTATCTACTAATCTGCAATTACGGACTAAACACTTCAGAGATGTTTTCAAGGCAGGTATAAAAATCAAACgATCCCCTTCTTCGAAGCCGGTCACACATTTACCTTGCAATTTCCAACAGGTAGTCCCGAAAATCTTCGTCGACACAGAAGTCAAATCAAGCCTgtcgtttattaaaaaaatcatgtcaAACGCCAAACTCATTCTGTCCCAGGGGCGCAACTCACTACATCCATCTATCAAGAGCGAAGAGCCAACCAGAGAAACAGACGACGGCGATGAATATACCGAATATAGCAAAGTTTTTACAGAAATTGTCGACAACCGTTTAATAAATAGAATCAAATATGCAGCTAGGTACCAATCAAATACGAGCTCTTTGACGACAATGAAAATTACTATATtaaccgagggCGATTACTGTATGGTTGACGATGATAGCAAGATGGATGCTACAGAGACAACTATGGATCTTACAGAGACATCGACCAAAGAAACCTCCTGCAGTGCAGGAGGTTTCATATTACAGAGCAGTACCGGAAATACAAGTGAAAATTCGGGTGATGTTTACAATGATATTTCTGATAAGGATACTTTATCTAGTAGAACTACATCAGAGAATAAAAACGTAAGTTTGAATTTCTCTTACGGCTACACTCAATCTTCAGATGACACCAATGGATCGTTTCAGCCAAGTGAATTTTTCATCGAATTCgataaaaattctacaaataacaaaatcactAACGAAGACAAATCGAAAACAAATCCTACAACTCTAGGTTTCGACAGCGCCACGGCCAGAACGGAAAAGAGTGAAATCGCTTCAAAAAATTCTTATTCGTTGCCGAATGGTTGGATAAACCCCTTTAAGAATGAAAAAAATGAGGCTAAGAAGAACGATTTTAATATCCCTTGTAGAGATGAATGTAGCAACCAAGAGGCTTCCACCATCAAAAACATCGTCAAAAGTAACACTTCAAATcgaagcaaatcaaataacGTGAGTTTTATCGAAGAAGGGAAGAATGAGGAAATAGCAGACGAAGAGAAATTACCACGCTTATTTTCTATGCCTACTAAAGAAGTGACATGGAACTCGTGCGGGTTGAACACATCGTCCCCTCCCTCTTCACCAACACCTTCCAATTCGTCATGTGTTGTAAAGGATAATTGGCATATTCGAGTTGAGACAGTTCAGACTTGCGAAAATGAGATATATACCAGAAGGGTACTTTGTGATGACGATTCAAACACTTCAGCTGAAGAAAATCTAAAGTTATCTGACGATATTGAGCAATTCAACGTTTCAACCAAAAAAATGAGAAACGCACCGCCTGAAAAAACTTCTCCTAACAGGAGgTCAAGTCACCGAACTAACATCGATAGAAAGAAAACCGTTGAAAAGATAGCGGGAAAGCGTAAAAGTGACCACAAACTTGATAGCAGCCCTGTAGCTAAAAGGGTACGATCGACTATCGATTCTAGGGATCAGAATAATCAATGTGCTTTTATTGGGTCACCGGTtctagaaaatgaaaatttcatagcaCCGTCTACTAAGACGACAAATATCGTCGATAGAAAAACTTCGGAAAGACTTGGATCCATGTTATCAGATGTAAGCTCTAGAGAAAAATCGTACCGTTCGCAAATACAAGAATTCAGAAATAGAGAAAAACATTACAACAGCATGTTTGATTGTTTACaaggtgaaattgcaaaatgtaaTAGCTCAAACGACGAGCATAGTGAAATAGGGAGAATTACTAAGGAGttgaaaaatgaaaacaaaattttgaaaAGCGAAGTGATGGAAATGAGGCTCGATCTAAAACACACTTTAGAAACGGTCCAGGGCCCCATGAGGTTGAAACTTGAAGCTGAAAAATCGAGATGCGAACAACTGCAGTACCAACTTAAAAACGCCTCACGCAGTATGGCCATGTCCGAGGAAAACTACATGAAGGAGATGAACAATCTGAAAATGCAACTCTGTTTGGCTTCTGCTAACATGAGCGAGTTAGAAACTATCAATAAGAAGCTTAAAGATCAAATGAACCTTACGGAGACGTTGTGCGCGAAACTCGAAGACGATTTGATACAACAAAAATTGAACGAAGCTGAAACTATCAAGAGGTTGACTAGTCGAAAAATTCTTGAAGAACCCCttgaaTCTGTATCGGTAGATAAATGCGAGTCAAATCTTCACGATATAGCGCGAAAATTAAGCAAAACTATTAAAGATTGTTCCCCAATAGGAGTACCAATTGAGTTAAAAGGCGCAGCAAAGTTGATCAGAGATTTGACAGACATGGTAGAGAGTAGAAAAGATATAGTGTCAATCGAATCTCTTTCTGGAATTAGTCGAACCAATATATCCTGTCAATCATCACCTTGTACTGAAGAAAACAGTACCCAGTGTAAGGACTCTCGGACGATTGGGACGGTTGTATCCAGTTGCTTGATTTCTGGTGCAAATCAATACCAACCCATAAACACTTTGTACGCATGTGCTCCGGATTTAATCAACATAAAAACGAATCAGAAATCTGCTACCCAGACACAGGAGACATCTCATAAGAAAACTACTTTCAGATCCTATAAAGACTACAAACATGATAAAAATACTGCTGTCCCATCTAGCGAGAGAACcaaatttcataataatatgCAGGATAATTGTACTGATCCCAAAATGATCGATAAAAAAATCAGTTCAGGACTGATCTATGTTGATGCATACAAAGATAAGCCACCCGCAGAAATTCCAGAGCAACCTCAAGCTAAGACCCAAccaaaaatcattttcaaaatcGATAAGGTTTCATTTAAAGCAGCTATTGATGAATTCAGAAAAGATGCTGACAACTCCAGGCCTCAGAACTCTGAAATCGAATCTGTGAAGTTTCAAATCATGGAAATAAAggaagctgaaactaaaaatctAGATGACGAAATTGTAGCTTCAAATCCTGAATTAAATGTTCAGCTTATATCTGAATCGAGTAACAAAATTACAACTACAATCGCAGAAAATTATAAGAGTGTAAAGTTTGACATTAAAGAGATGGTCGAAGATGAAAGTATCAAGCCAGATGATGAGATCGTAACTTCAAATCCTGAATTAAATCTTCAACTTGTATCTTCAAGGACTGAATTGAGTGACAAAGTTACAACTACAATCGCAGAAAATTCTAAAAGCGGTGTTGTAAAGTTTGACCTTAAAGAGATGGTCGAAGATGAAAGTTTCAAGCCACAAATTGTAGATACAGATCTGGATACAGCGGGCGAACCAGATATTAGTCATTCTaatataaaagatttaaatacGTTTGATCTATCTGCTGCGAATGGACCTTGGCTTGATGAACGTAGCGGTGATGCCTTACATGAACATAGTAGTAAGACTTGCAcAAGTTCCATAACGATGGAACAAAATGATTCAGATGTCGATGAAGAACCAACTTCCAAAGAACGTCCGAAACCTGCCATAGTACCTTTGAAACCAATAGAATCCAAAGCTAAGactCCTGATAAGTCGAcgaaaaaatcgatgaaacttCATATGAAACCATCTTTAAAGTCTCAAAAAATCGTGACAAATGATATGGATTTTCCCTTTGAAGTAAAGACTGAGGTAGATGTCTTAGACGAGCCACCAGAACGTTTGCACGTTACTACGTGCGTTACAGACTCTGGAAATTTGGAAGTTGTCACCGAAGGACCCAGGGGAACGATTGAAACTTTTTTGAATTACAACGAGGACGGAACCATTgaagtAATAACTCAAATGACAGAAACAACTGGTACATCTTCAACGGTTACTTCGAAAAAGATCTTGGTCCCTATTGCTACCACCTTTGCTACCAGTGGTGACCCCAGTTTACTTACAACTCCCAGCAAAGTTGTGAATAGGCACCATCTCAAAGTTAAAGGTGATCATAACACAagaatatctaattaa
Protein Sequence
MDDEADLKKMIEVLKSTREENAEDLQFQEFINFDDSDGDEDDEYTTQDLDLENNFNLDISTLYKYNTISSLKPEEKAVIDSCRDRDLKKLLLLNRKQNMQLIQLYKTFKDLLIECKQNILEKNEIVKQYFEAFRTQRQSSGSWRVVAPYFKDKGFYVSPPNSDTIKKKNNKELSYYDLMPLKKWSKYECDRLVRAVKSNYVSNVILQLKKEIRMIKSGEATEDEKEEVKEKQTRLNRLSNPEYSEIPPLGSDENINWIRVADVFIRDKHSDFECRSFWHIYLHPSVNKAVWLAEENNKLKELAKKHKYQNWDLIAKDLDTNRSCFTVARQYFSNLYTTHKKGEFTIEEDRKLLDLVSKYRIGDHIPWVQIVRHFKYRTRCQLHHRFTYYLSQVDKRKGKFSEAEDVMILLVVAKHGINYRKCAEYLTERSINQIKGRYTSNLRGLLNKYIWSVEDDEALMEHAKKNDKKSQLWGELTSKLKRSRGQIRQRYIVVKNFLDQNPGSTIRDVTRRKHKHKSEDSYCTVRRVADYFLEKSEDIPSIEEIEEELRQYHSEPSSFVPKVESTEHDNVKIEHNSNNIDDLLTEFFCNSHMQPGVILNAENLKQAVDEVESLLDILNINLVIPHHLDDSHLDYIDMEIIGELRKRKNFNRSGGKEIKRLVPASFHTATTMRSLLVKYLHYKNEKIAKKEIVPYKDEKIFGNFDVYSNANCSKAKTLITEETSCLTDLEKRKLQADRNLFYRRFLSLLNWPAILTLEPPSRDFASIMENISIDSRPPPKRTYSRKNKSEDDRASKVRILDENVTQSLQLTPVTDKSVIVNLLKDNSKKLFCMDKVQFGTQTKTFLKEVDLDFLTRKGSDTGSAPTTQTYSNKRKLNNVTLETPGTSKFKGDPNSIEDNYDVPSHPPQIIAVHSGLWICEGKFLVQCKLSTNLQLRTKHFRDVFKAGIKIKRSPSSKPVTHLPCNFQQVVPKIFVDTEVKSSLSFIKKIMSNAKLILSQGRNSLHPSIKSEEPTRETDDGDEYTEYSKVFTEIVDNRLINRIKYAARYQSNTSSLTTMKITILTEGDYCMVDDDSKMDATETTMDLTETSTKETSCSAGGFILQSSTGNTSENSGDVYNDISDKDTLSSRTTSENKNVSLNFSYGYTQSSDDTNGSFQPSEFFIEFDKNSTNNKITNEDKSKTNPTTLGFDSATARTEKSEIASKNSYSLPNGWINPFKNEKNEAKKNDFNIPCRDECSNQEASTIKNIVKSNTSNRSKSNNVSFIEEGKNEEIADEEKLPRLFSMPTKEVTWNSCGLNTSSPPSSPTPSNSSCVVKDNWHIRVETVQTCENEIYTRRVLCDDDSNTSAEENLKLSDDIEQFNVSTKKMRNAPPEKTSPNRRSSHRTNIDRKKTVEKIAGKRKSDHKLDSSPVAKRVRSTIDSRDQNNQCAFIGSPVLENENFIAPSTKTTNIVDRKTSERLGSMLSDVSSREKSYRSQIQEFRNREKHYNSMFDCLQGEIAKCNSSNDEHSEIGRITKELKNENKILKSEVMEMRLDLKHTLETVQGPMRLKLEAEKSRCEQLQYQLKNASRSMAMSEENYMKEMNNLKMQLCLASANMSELETINKKLKDQMNLTETLCAKLEDDLIQQKLNEAETIKRLTSRKILEEPLESVSVDKCESNLHDIARKLSKTIKDCSPIGVPIELKGAAKLIRDLTDMVESRKDIVSIESLSGISRTNISCQSSPCTEENSTQCKDSRTIGTVVSSCLISGANQYQPINTLYACAPDLINIKTNQKSATQTQETSHKKTTFRSYKDYKHDKNTAVPSSERTKFHNNMQDNCTDPKMIDKKISSGLIYVDAYKDKPPAEIPEQPQAKTQPKIIFKIDKVSFKAAIDEFRKDADNSRPQNSEIESVKFQIMEIKEAETKNLDDEIVASNPELNVQLISESSNKITTTIAENYKSVKFDIKEMVEDESIKPDDEIVTSNPELNLQLVSSRTELSDKVTTTIAENSKSGVVKFDLKEMVEDESFKPQIVDTDLDTAGEPDISHSNIKDLNTFDLSAANGPWLDERSGDALHEHSSKTCTSSITMEQNDSDVDEEPTSKERPKPAIVPLKPIESKAKTPDKSTKKSMKLHMKPSLKSQKIVTNDMDFPFEVKTEVDVLDEPPERLHVTTCVTDSGNLEVVTEGPRGTIETFLNYNEDGTIEVITQMTETTGTSSTVTSKKILVPIATTFATSGDPSLLTTPSKVVNRHHLKVKGDHNTRISN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-