Caur026389.1
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- clz9
- Assembly
- GCA_949320105.2
- Location
- OX439476.1:2423413-2425431[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 6.6e-06 26.9 0.0 2 41 17 56 16 60 0.92
Sequence Information
- Coding Sequence
- ATGgttagaaattacaaaaaaaagtctGATCGAGCAACCAAATACAGCCAAGATGATTTAAATCACGCAGTAGCAGAGATAAAAAGAGGGGTTTTATCGATATATCGGGcacataaattatttaatattcctAAAACCACACTATTTTACCATGTGAGAGGTGCTCGAGGAGTAAAGAGCAAGTCACAAGGTAGGGCCCCAGCGCTTCCACTCGAAGAGGAGACCAGACTGGCTGAGGGTCTAAAGACTATGGAGCGGTGGGGATTTGGAATATCTAGATTAGAAGTATTAGAACTTGTTCGAAAGTTTGTTGttacaaatgaaataaaaacgCCATTCAAGAACAACATTCCTGGTGACGAGTGGTTTGCTAGTTTTAAAAAACGCCATAGGCTTAGCGTAAAAAAGCCTCAGGCTGTGGAATATGCGAGAAAAAAGATGACAGATCCATTTTTTGTCCAAGAATATTTTGATATCATTAAAGACACATTAATAAAGCTAAAGTTAGAGGAGAAGCCAGAGCTAATATGGAATATGGATGAAACATCCATTACACACGATCCTAAAAAAACCAAAGTCGTGGGGGCCAGGGGAAAGCCGAGTTCCAGAACCACTTCCGGACCAGGGCGAGAAAACACCACAGTTCTTTCGGCAGTTTCTGCATCAGGAACGAAGGCGCCACCACTAATTGTATTCAAGGGGAAGAATATTTGGGATTCCTGGCTACCTGACAACCAAAATTTGTTTCCAGGAACTGCCTATGCAGCTAGCCCGAATGGATGGATGGAAAGTGatatatttcataattattTCCAAAAAACGTTCATTCCTGCATTGGGACCAAGCAGACCAGTATTATTGGTATATGACGGTCATAGTACGCATATTAGTATTGCACTTATTGAATTAGCACGTGCAAATGACATCACAATAATCAAACTTCCTCCCCATACAAGTCATATCTTACAGCCTTTAGATTTGGCTGTATTCAAATCTGTAAAAGATATTTGGGACCAAAAACTCGTGACTTGGCAGAGACATAATACTGGCATCAGAATTCCAAAAAAAGAGTTCTCTCAGCTGATTGGTGCCACCTGGAAAAATGTAAACACAGAAATTATCAAAAGCGGATTTAAAAAAGCTGGTATTCATCCGTTCAACCGTCATGTCATACCAGAGGAAAAATACCATCCCGAgagtttaaaaagatttaaagaaCAACAGGCTTCAAAAAACCAAAGTCTTATAGTTGTAGATGAAAACGTAACTCCTAATATTGACGCAATTACTAGCCAGAATGCACAGTCCATAGATGATGACCAATCCATAGAAAACAAAGCAACTAACATTTTTGGCGCAGTTCCATTGAGTTTTGAGGAGCTATTATTGAGCACTGTAAAACAGACCAACAAAGAAAGCCCATCGGCCACGAAAAGGAAAAGAGTAGCCACAGGTGCAGAAGTCGTTACCTCGGAAGAAGTATTGAATAGACTCGTAGATGAAAATATAGcaaaggatttaaaaaaaaaagagaagcaGAAAAGACAAGAAAAAGGAAAGGCAAAACGAAAAATTCAGAAACGTAAAAAGGTAGAGAGTTTTAGCAGTTCCAACTCTGAAGAACAGATGGAGGAACCCTCATATGTGGATTCAGAAGATGATATTGATCCAGAATTGTGGGAGAAAGAAGAGGTAACAGTTGAAGAAGAGGAGCAAGTCGTCGAGGATGAAGCAGAATTAGGGAAGTTTCAAATGGCAGTGGGAAGTTGGGTTGCTGTTGAGTATATGTCTAAAAAACATGTCAAGCATTTTATCGGAAAACTTGAaagcagaaatgaaaatgaatggaaaattcattttttgcgATACATGCAGAGTAGTAACAACTTTGTTTGGCCTGACATAGAAGACACGGATATGATAGTCGAAGAagatattgtaaaaatattacCGGAACCTATTAGAGACAGAAGGAATCATTTCattttcaaatcaaattttgaagggttaaacatttaa
- Protein Sequence
- MVRNYKKKSDRATKYSQDDLNHAVAEIKRGVLSIYRAHKLFNIPKTTLFYHVRGARGVKSKSQGRAPALPLEEETRLAEGLKTMERWGFGISRLEVLELVRKFVVTNEIKTPFKNNIPGDEWFASFKKRHRLSVKKPQAVEYARKKMTDPFFVQEYFDIIKDTLIKLKLEEKPELIWNMDETSITHDPKKTKVVGARGKPSSRTTSGPGRENTTVLSAVSASGTKAPPLIVFKGKNIWDSWLPDNQNLFPGTAYAASPNGWMESDIFHNYFQKTFIPALGPSRPVLLVYDGHSTHISIALIELARANDITIIKLPPHTSHILQPLDLAVFKSVKDIWDQKLVTWQRHNTGIRIPKKEFSQLIGATWKNVNTEIIKSGFKKAGIHPFNRHVIPEEKYHPESLKRFKEQQASKNQSLIVVDENVTPNIDAITSQNAQSIDDDQSIENKATNIFGAVPLSFEELLLSTVKQTNKESPSATKRKRVATGAEVVTSEEVLNRLVDENIAKDLKKKEKQKRQEKGKAKRKIQKRKKVESFSSSNSEEQMEEPSYVDSEDDIDPELWEKEEVTVEEEEQVVEDEAELGKFQMAVGSWVAVEYMSKKHVKHFIGKLESRNENEWKIHFLRYMQSSNNFVWPDIEDTDMIVEEDIVKILPEPIRDRRNHFIFKSNFEGLNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00387155;
- 90% Identity
- iTF_00387151; iTF_00387153;
- 80% Identity
- iTF_00387151;