Caur001242.1
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- -
- Assembly
- GCA_949320105.2
- Location
- OX439472.1:7715305-7715631[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-09 4e-06 27.5 0.0 2 44 17 59 16 60 0.91 2 2 7.2 3.9e+03 -1.2 0.0 17 25 94 102 93 103 0.80
Sequence Information
- Coding Sequence
- ATGCCTCGTCTGAAGTATACCCGCAAAACTTCTCGCGCCTCGTGGTCTGAAAAGGATATGGAACGTGCGCTTAAGACAATAAATGACAAAGTTGCTTCCATACGAAAAACTGCACAAATGTTTAATATTCCATATGGAACATTACGAGACCGTTTAAAAGGTCGCTTCGCTACAAAAAAGTATAAACTGGGCAGAAAATCTGTTTTTACTGTTCAGCAAGAAGAAGACCTCGCAAAACATATTATAAACCTCTCTCACCTTTTTTATGGACCAACAGCCACGTCCATAAGACAACTTGCATTTGAATTTGCACAAACCATAAAATaa
- Protein Sequence
- MPRLKYTRKTSRASWSEKDMERALKTINDKVASIRKTAQMFNIPYGTLRDRLKGRFATKKYKLGRKSVFTVQQEEDLAKHIINLSHLFYGPTATSIRQLAFEFAQTIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -