Cdil022869.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- znf711
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010004450.1:78854-99500[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6.9 1.1e+03 1.7 0.2 6 23 245 264 242 264 0.85 2 14 2.1 3.4e+02 3.3 2.7 1 22 363 384 363 387 0.90 3 14 0.00018 0.029 16.1 0.7 2 22 444 464 443 467 0.89 4 14 3.8 6.2e+02 2.5 4.1 2 19 483 500 482 505 0.90 5 14 0.014 2.2 10.2 1.4 1 23 510 534 510 534 0.90 6 14 0.019 3 9.7 1.4 2 23 544 566 544 566 0.93 7 14 0.0049 0.79 11.6 0.3 2 21 572 591 572 592 0.92 8 14 0.28 46 6.0 0.6 1 23 620 642 620 642 0.93 9 14 4.7e-05 0.0077 17.9 6.9 1 23 652 673 652 673 0.98 10 14 7.8e-06 0.0013 20.4 4.1 1 23 679 702 679 703 0.94 11 14 0.0024 0.39 12.5 0.0 2 23 714 736 713 736 0.94 12 14 1.8e-05 0.0028 19.3 0.5 1 23 743 765 743 765 0.99 13 14 2.7 4.4e+02 2.9 0.3 2 23 771 794 770 794 0.80 14 14 6.8 1.1e+03 1.7 4.1 1 17 800 816 800 817 0.88
Sequence Information
- Coding Sequence
- atgagtGATGACGATGACGAAGACACCCATTTCTGCCTGAGGTGCAATACTACTATAACAGGGTTAGACGCGTATGTAGCCCACAGGAAATCAAGATGTAATCAGAACCGAACAAGGGAGAGATATGAGGCAGGACCTTCTGGACTCCAAGATGACATATGCCGAGGTGTTTCCCCAGAAATACAGAGTACTCCTGTAGCTGATTTGATGCTTCATTCTGGCCTTACTCACCAAACATTGGCTTCATCAACGTCCAACAAAGAGGAGCCACAAGCTGACGACTACTTCTTCTCGTCTTTGTGTCTCCAAAGCAGTTCTAAAATAGGTGAACCTGGAGGTGCTACAAAACCGTGTGGAGTTCTGACACGCAGCAAGatCTTAGAAAGAAGCAATGTGCGAGATGACAAACCTAGTGTTCTTCAGAATGAGGAAGTTGAAGCAAACGAAGAAAGCGAATCAGAAGAATCCGACGATGAGAGGCATCCTCCTCCAACGAGTGGCGGAAAGTGGTTACCAGGGTTCAGACCTACACAGCGTGCTTCCTCCATCTTGTGGAAATCTACCGTAACACCAGAGCACAAGCCAGCAGAGTCTGAAACGATTACTGAGcagCTGACAGGAATGGTGAGACGCCCACTTGCTCCTCCACCAAGTCATACAACAGGAAAGTGGGACTCTTCTGAAAGACCATGGGGTCCTTTGCGAAATCCCAATGCTTACTGGTGTGGTCCATGCAACCGTAGACTGAGTTCTAGGATTGTTTACGAAAGGCATATTAAAAGCGAGCTACATTTTAAAAGGACCAACCCTTGGAGAGCTCCAGTAACTATGGGAAAGAGGGCTAGAAGAAGAACTCGAATAGCGGAAGAATCTTCACTTCGAGTGCTAAATCGGAAACACACCTCAGAAGTCAAAGGCGCGAAGAGGCGCCGCGGAGCGACTGTCTGCGACGTTTGTAATTACAGAGTCGTGCCGCATCTGATGGGGAAACATCTTATATCCCACTACCACTGCAGCCATCCGCGGAACGACAAGAACAACGAGATGGTCCTCAAGCACATAACGAGCATCGTTCATCAGGCCCCTTTCCAATGTGGACTTTGCAAATTTTATTGCAACACGCAGCAGGCGTTTTCCAGCCACTGGTCGTCAGAAATGCACAGGCAAAACGACTTGAAGagAACAGGGATATACTGGTGCCCGAACTGTGATTTCGAAGCAGAATCCAGTGTTGATATGAGTTGCCATCTCACCGAAGAGTTGCATCGTGATCGAGTAAAGATGGTCAACCATTCAGTGCCGTTGATCATACAGAAAATCACTCCGCTTCAATGCGACGTTTGCGGCAAATGTTTCCGCTACAATGTACAAGTACGAGCGCACAGCAAAGTGTGGGGTCACAAACAAATCAGGGGGACAGCATCCGAAAGCTACCAAGAAGCCTTGAGTTGCGCGGAATGTCCGTATAAATGTTATTCGTTGGCCTCTTTTCAACGGCACTGCTACATGAAGCACAAAAAAGTCCCTTACTTCTGCAGAAGATGCGGACTTAGTTTCACCAGTTTACTTGAGGTCAAGAAACACCGTAAATCTACAGCACATCGAGATGCTGCCGGTCCGAAAACGAGACGTTGCCCTCACTGCACAATGTCTTTCCTCAAACTATCATCGCTCAAAAGCCACTTGGAGGAGGTTCACCCGAATTTGAAAAACAGatGCTTGAAATGTGGAGCCTCGTTCACTTTGAAACAGCAACTCTCTCGTCATGCTTTGACTTGTCAAATACAGCCGATAAGTGACCCAGACGAATCCCTGAAGGAAACAGGATTAGATGACATCAACCAAGAGGAAAAAGACTTCAGCTGTAATAGATGTCAGTTCAATGGAAAAACAGAATCGGAGCTCTTAGTGCACAAAGTGCTCCACGATAAAGTAGAATCAACGACTGGGAAATTCCATTGTCCATACTGCAACAAGACTTTCAATGAATCGCATATGAAAAAACATATGATGACGCACACGTCTGAGCGGCCTTATAGCTGCGAGCACTGCAACTACAgTTTCAGCCGCCAAGATACGTTGAATCGCCATGTTGTGAAAATACATCACGTTGAAATAGACAGCCTGAAGAAGAATCTTAGCTGTGGGCTATGCGGTAAGGAAGTGCCTTCGTCAAACGCTCTTGATCGCCACATGAAAGCCAACCATCAAGATCGATCCAGGTCGTTTAAATGTGTCGAATGTGATCAAGCTTTCTACGAGAAAGGTACTCTCGACCGCCACATGCAAACTCATTTCGGGAAGAAGTTCCATTGCCCGGAAACTGGCTGCATCTTCAACGCGAGGTCATTGGGAGAACTTAAGATCCACGCGAGAACGCATTCGGAATCCAGGGACTTCCATTGCCAGCAGTGCACATAttgttcaaaaaccaaaaaccaactACTCAAGTAA
- Protein Sequence
- MSDDDDEDTHFCLRCNTTITGLDAYVAHRKSRCNQNRTRERYEAGPSGLQDDICRGVSPEIQSTPVADLMLHSGLTHQTLASSTSNKEEPQADDYFFSSLCLQSSSKIGEPGGATKPCGVLTRSKILERSNVRDDKPSVLQNEEVEANEESESEESDDERHPPPTSGGKWLPGFRPTQRASSILWKSTVTPEHKPAESETITEQLTGMVRRPLAPPPSHTTGKWDSSERPWGPLRNPNAYWCGPCNRRLSSRIVYERHIKSELHFKRTNPWRAPVTMGKRARRRTRIAEESSLRVLNRKHTSEVKGAKRRRGATVCDVCNYRVVPHLMGKHLISHYHCSHPRNDKNNEMVLKHITSIVHQAPFQCGLCKFYCNTQQAFSSHWSSEMHRQNDLKRTGIYWCPNCDFEAESSVDMSCHLTEELHRDRVKMVNHSVPLIIQKITPLQCDVCGKCFRYNVQVRAHSKVWGHKQIRGTASESYQEALSCAECPYKCYSLASFQRHCYMKHKKVPYFCRRCGLSFTSLLEVKKHRKSTAHRDAAGPKTRRCPHCTMSFLKLSSLKSHLEEVHPNLKNRCLKCGASFTLKQQLSRHALTCQIQPISDPDESLKETGLDDINQEEKDFSCNRCQFNGKTESELLVHKVLHDKVESTTGKFHCPYCNKTFNESHMKKHMMTHTSERPYSCEHCNYSFSRQDTLNRHVVKIHHVEIDSLKKNLSCGLCGKEVPSSNALDRHMKANHQDRSRSFKCVECDQAFYEKGTLDRHMQTHFGKKFHCPETGCIFNARSLGELKIHARTHSESRDFHCQQCTYCSKTKNQLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -