Basic Information

Insect: Creontiades dilutus
Gene Symbol: -
Assembly: GCA_031894815.1
Location: JAVIWC010003235.1:270038-271084[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00022 0.036 15.8 0.2 1 23 42 66 42 66 0.97

2 8 2.5e-05 0.004 18.8 3.4 1 23 72 97 72 97 0.98

3 8 1.8e-05 0.0029 19.2 0.2 1 23 107 132 107 132 0.98

4 8 0.0056 0.91 11.4 2.9 2 23 137 158 137 158 0.96

5 8 2.6e-07 4.2e-05 25.0 2.0 1 23 164 186 164 186 0.99

6 8 0.0089 1.4 10.8 0.0 3 23 191 213 190 213 0.92

7 8 0.00018 0.029 16.1 1.9 1 23 217 239 217 239 0.96

8 8 0.0001 0.017 16.8 4.6 3 23 255 276 253 276 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00022	0.036	15.8	0.2	1	23	42	66	42	66	0.97
2	8	2.5e-05	0.004	18.8	3.4	1	23	72	97	72	97	0.98
3	8	1.8e-05	0.0029	19.2	0.2	1	23	107	132	107	132	0.98
4	8	0.0056	0.91	11.4	2.9	2	23	137	158	137	158	0.96
5	8	2.6e-07	4.2e-05	25.0	2.0	1	23	164	186	164	186	0.99
6	8	0.0089	1.4	10.8	0.0	3	23	191	213	190	213	0.92
7	8	0.00018	0.029	16.1	1.9	1	23	217	239	217	239	0.96
8	8	0.0001	0.017	16.8	4.6	3	23	255	276	253	276	0.95

Sequence Information

Coding Sequence: ATGGCATTCGGATCAGAATCTGAAGACGGCGGAGTAAAGGTTGATGACCACAACCAGGAGCTTCCTGTGCCTAATATTTCCACAACCAGAAAACAACCAATCGAGAAAAAGGACAAGAAGCAATACCATTGCACAGTGGACGGTTGTAACGCTTCATTTACAAGGCCTTGGCGTCTAGAAGCTCACATTAGTGTTCATTGCGGTGAGACTcctttcaagtgcgattacgaTGGATGTACTAAGGGTTACACCTCCAAAAGCCATCTTTCCCGACACAAGAAAACTGCGCATACCGGCGGCTTCAGTCCTTCCAAATTGTACAAATGTCCAAATGAAGGTTGTGATGCTGTCCTTAAAACTAACCAGAATCTAACTAAACACCTGAAACGAGCGCATGGAGACAAACGTGTATGCACTGAATGTGGtaagaagtttttaaaaacgatCCACCTGAAATACCATATGCAATTTCATACTGGGGAATTCATTTACCAGTGTAGTGACTGTAATATCAAGTTCGCTCGACGAACTGAGTACAATCGTCACATGAGAAGtcataaaattaacatttgtCCTTATCCTGGGTGCATGATTGGATTCGTCCAATGGTCTGCAGTAAGGAAACATTTGAAGACTCACAGGCCTAGATATGTCtgctattattgcagcaaaccGTTCATACACAAAGGATTGTTTAGACAGCATGTCGTTAGTCATATCCCTGATCATCCAAAACGGAAGACTGTCCTCAAAGAATATGGATGCTACCACTGCGGTAAAACGTTTTGTGGCAAACAGTCGCTTCGTCGGCATGTAAAAAATATACACTTCAAGAAAAAGGTAATTCGGACTGTGAACCACAACAAGCCCAGGAAAACAAGGAAGGATAAGGGATCTTCGAAACCGGCATTCGCCTTTTCTTCTGAACTCTCTGGTGTTGAAGTGTCAAAATCACTTTCAAAAACATTACTGAATGCTTACGAACCTGTCCTGGAAACAGCTGACGACATCATTGCTGCCATTGAGGAAGCTCTCCTTGGAACATGA
Protein Sequence: MAFGSESEDGGVKVDDHNQELPVPNISTTRKQPIEKKDKKQYHCTVDGCNASFTRPWRLEAHISVHCGETPFKCDYDGCTKGYTSKSHLSRHKKTAHTGGFSPSKLYKCPNEGCDAVLKTNQNLTKHLKRAHGDKRVCTECGKKFLKTIHLKYHMQFHTGEFIYQCSDCNIKFARRTEYNRHMRSHKINICPYPGCMIGFVQWSAVRKHLKTHRPRYVCYYCSKPFIHKGLFRQHVVSHIPDHPKRKTVLKEYGCYHCGKTFCGKQSLRRHVKNIHFKKKVIRTVNHNKPRKTRKDKGSSKPAFAFSSELSGVEVSKSLSKTLLNAYEPVLETADDIIAAIEEALLGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -