Cdil006781.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010000797.1:2067779-2077803[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 7.2e-05 0.012 17.3 0.5 1 23 308 330 308 330 0.99 2 9 2.3 3.7e+02 3.2 0.4 1 23 340 362 340 362 0.89 3 9 4.5e-06 0.00072 21.1 0.7 1 23 410 433 410 433 0.96 4 9 3.5e-05 0.0057 18.3 4.6 2 23 514 535 513 535 0.98 5 9 1e-05 0.0016 20.0 0.3 1 23 541 563 541 563 0.98 6 9 6.6e-07 0.00011 23.8 0.6 1 23 569 592 569 592 0.97 7 9 3.4e-07 5.6e-05 24.6 0.7 1 23 598 620 598 620 0.99 8 9 1.9e-05 0.0032 19.1 1.3 1 23 626 648 626 648 0.98 9 9 8.1e-06 0.0013 20.3 3.4 1 23 654 676 654 676 0.98
Sequence Information
- Coding Sequence
- ATGGATTCGTCAGTTGTAGAACGTCATTCAGAATTGATCGATCCTCTAAATATTGATCAAAGACTTAACCCAAAccagaaaatcaatttaaatacaGTTGTTGTGACTGAGACGCAAGAGACTACTGAACTCATAGAGACGCAGTATATTAACTTACATAGGTTACCTGAGAACCTGCAAAAGGTACAGCTTGTCACTGATTCATTATCAAATGATCTGTTAAGTCAGCAAGTTGTAGAACTTACTTCTGGGAATGATTTTATTGCTCCTGTACCTGGTCAGTATTATGAAGATGAATTTCTTCATCATGACCTCACTGAGGAGGACAGAAGACTGGCTGCTGCTCTCGTCGCTGTCCAGCTGGTCCAGCAGCAGAAGCACTCCATTCTTGCTCCTGAACTATTAAAGTCTACTTCATTACCTTCCTTAGCCCctattcaaaatgtatcaacTGAAAAGCAACCTGTTGGCACAACTATGGTGACAAGCTATTTACAAGCTTTTGGTGAAGATGAAGATTCCGTGCCCCAACAGTTGATGGATACAGCTCAAAGTCCTGAAAGGATGTTGAAAATATATCACACCCAATCAGTGAGCACTGCACCACTCAATGATATTCGGCTGCCAGCTTTGCCTCCTCTGAAGAAAGTTCTATCTAATCCATCTATAATGAGGACTCGTTACCGCTCACTTCTTGAACAACCCAATGAAGAAATTGACAGCAAGAAGCTGGCAGCGAAATCACTCAGTAAGGAGGAAAAAGCTGAATTACATAGTGACAACAGCGGTGATTTGATGGATAATGAAGGTGAATCAGATTTTGAAGGAGACTGCAATCTTAAATCATCTAAAAGAAGTTTGCCTCACAAGAAGAGAATTCCAAGGAAACTGAAATCTCAATTGGCAAAAAACAATGCTAAATATAAGTGCCAAAAATGTGGCGATACGTTCATTTCTCAGGCAGCTTTGATGTCCCATAGATCTACCCACCAAGTACCCTCTAAAGGATTGAGTGTATTTGCCTGTGAGATTTGTgggtttcaaaataataatcaagttCGATTTTTTGAACACCTTAAAGGCCACTATGAGCCATCTGTTCTTCAAGTTACTGATGTTCTACAAGAGCaagaaagtttcatcgaatatGAGGCTGAGCCCAACTCTCATCCAATTATTCAAGACAGTTTTTCCGTCAAAGAGGAAAATCAGGCTTCAGCATCAAGTTTCGCTTGTAACCAGTGTGGAAGAACCTTTCGCCGTCAAAAAACATATGATGCTCACATGGCGACAGTACATCCACCCCTTGAAGAATTCAGTGAGCCAGAAGACATGATGGAAGGGATCCGCCATGTTGTCAATATTCAAACTGCTGATGAGGAAAAAGAAGAGAATCtaagaaactggAGGTTCTCTGACGATCTTGACAACATTCACCCAGATATTGTATTGGATTCCAAAGGACCTACCGCTGATCCCCTGATGGAAGACCTCCAAGATGTGGATgctgaaaaagggaaaaagcgGAAAAAAGCAGTTCAATGTCCTCACTGTTCAAAAACATTTACCCACCGTAATTCTTTGTTATACCATGTGAGATCACACTCTGGAAGGCGACCCCATCAGTGTGATGTTTGTGGCAAAGGGTTTTTTGCTGCTAATGCTCTTAGGGTACATATGAGGATGCACTCAGGTGATAAGCCTTACACCTGTTCAGTGTGTGGAAGAAATTTTCGACAGTGGGGTGACCTAAAATATCATATGACATCCCTTCACTCTGATACAAAACAGTATCAGTGTGAATTCTGTGGGAAAGATTTTGCCCGAAAGTACTCCTTGATAGTACACAGAAGAATTCATACTGGAGAAAAGAATTATGTTTGTGAATTTTGCCGCAAATCCTTTAGAGCATCTTCTTATCTTGTGAATCACCGAAGAATACATACAGgagagaaACCTTACAACTGTGATGTATGCCACAAACCTTTCCGTGTGAAATCCGATATGAAAAGGCACAGGAACACTCACAATAAAGGCAGAATAGATGTAGTCCCTGTTCTTCCACCTCCTGGATCACCAGAAACTATTCTTCCTGATAATCCTGACACTGACAATATATTGACTGATCATTCATTGCCTCTAAATCTGAACATGAGGCAGGATTCTTCTGATGATCTCACATCTTACAGCAGAGATCCCATGAGCAGGGAGGAAAACACAGTATATGTATGGATTCCTACATCTGGTGAATCTATATTACCTGATTGA
- Protein Sequence
- MDSSVVERHSELIDPLNIDQRLNPNQKINLNTVVVTETQETTELIETQYINLHRLPENLQKVQLVTDSLSNDLLSQQVVELTSGNDFIAPVPGQYYEDEFLHHDLTEEDRRLAAALVAVQLVQQQKHSILAPELLKSTSLPSLAPIQNVSTEKQPVGTTMVTSYLQAFGEDEDSVPQQLMDTAQSPERMLKIYHTQSVSTAPLNDIRLPALPPLKKVLSNPSIMRTRYRSLLEQPNEEIDSKKLAAKSLSKEEKAELHSDNSGDLMDNEGESDFEGDCNLKSSKRSLPHKKRIPRKLKSQLAKNNAKYKCQKCGDTFISQAALMSHRSTHQVPSKGLSVFACEICGFQNNNQVRFFEHLKGHYEPSVLQVTDVLQEQESFIEYEAEPNSHPIIQDSFSVKEENQASASSFACNQCGRTFRRQKTYDAHMATVHPPLEEFSEPEDMMEGIRHVVNIQTADEEKEENLRNWRFSDDLDNIHPDIVLDSKGPTADPLMEDLQDVDAEKGKKRKKAVQCPHCSKTFTHRNSLLYHVRSHSGRRPHQCDVCGKGFFAANALRVHMRMHSGDKPYTCSVCGRNFRQWGDLKYHMTSLHSDTKQYQCEFCGKDFARKYSLIVHRRIHTGEKNYVCEFCRKSFRASSYLVNHRRIHTGEKPYNCDVCHKPFRVKSDMKRHRNTHNKGRIDVVPVLPPPGSPETILPDNPDTDNILTDHSLPLNLNMRQDSSDDLTSYSRDPMSREENTVYVWIPTSGESILPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145853;
- 90% Identity
- -
- 80% Identity
- -