Cdil017893.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010002582.1:202857-209693[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 3.2e+02 3.4 0.1 3 23 7 27 6 27 0.94 2 15 2.5 4.1e+02 3.0 0.3 1 20 358 377 358 381 0.77 3 15 0.39 63 5.6 0.2 5 23 402 421 399 421 0.92 4 15 0.0041 0.67 11.8 1.0 2 23 427 449 427 449 0.95 5 15 6.2e-05 0.01 17.5 0.6 2 23 452 473 451 473 0.96 6 15 2.4e-05 0.0038 18.9 1.4 1 23 479 501 479 501 0.95 7 15 3.3e-06 0.00053 21.6 2.0 2 23 508 530 507 530 0.93 8 15 0.00066 0.11 14.3 0.7 5 23 543 561 542 561 0.96 9 15 0.00013 0.021 16.5 1.9 2 23 567 589 566 589 0.97 10 15 0.0011 0.18 13.6 0.1 2 23 605 625 604 625 0.96 11 15 0.031 5.1 9.0 1.8 5 20 635 650 633 653 0.88 12 15 0.00014 0.023 16.4 0.9 1 23 661 683 661 683 0.99 13 15 0.00014 0.022 16.4 5.8 1 23 689 711 689 711 0.97 14 15 2.9e-07 4.7e-05 24.9 2.7 1 23 717 739 717 739 0.98 15 15 0.0015 0.24 13.2 9.3 1 23 745 767 745 768 0.96
Sequence Information
- Coding Sequence
- ATGGACGGACTAGTAGCTTGTCCTGTCTGCACTTTGTACCTGAGGGAGGGGATGTCCCTCAACAGTCACCTGGAAACTCACCCGAAAGACCAAGTGATTGAAGCTCTAGTGAGAGCTGTGTCCGACAGAGAGCGAGCCTCCGGCCTTCATCCACACTCCGCCATCATTAATCCTTTCCAAGTTGTATCGGAGGAGCACATCTTCTTCGGGCGACAGCAGGTGACAACCAACATCCTGGCCCCGCTTATGACTTACCCCATCTACCAGCAGCAGCCAGTTCTCCATGGATCGCCGCATCACGAGCAGTTCATTCAACAGTCCGCGCATCAACCGCAAATGCAACATGCGCAACAAGATGAGCTCGGAGATGGAAGGAGGGCTCAGGATATGCCAGTATCTTTGACCACTAACGTGAACTCTCCAGGTAATGAAGTTATGACGACATTGATCAATGTTCAGCCTGGACAGCAAGAGTTCAGGCAGGGAAGCCCAGAGACTGTGCCGCTCTCAATGGTCGAGGTTGAGGAGAAATGCGACTACGAGGACATGGTAAAAGCCGATACACGTATGTTGATACACGTAACGGACGATGAAGAGTGCGAGAGCCAAGGTGGGAGACCTACGGAAGAAACCCAAACATTTACCGTACCCACGCCAACTAGTGTGATCCACACTCCGATAGACCACGCCAATAACACTCAGTCCATCATCGCCTTGGCTAATGTTGAACGGGACTCGAGTCAAGACCAGTTCATCACATCGGATTTTCAGGACGAGGATGCTAGGCACAGTGAGGACTTCATTGACGACTCCAACCACGATTATGGTGATGATGAAGATGATGTCCACCATATGGTTGAACATCAACGACGCCTGTACATGGAGGAGCAGGAAGACGACGTGGAGGCTCGCAGTGACTCTGGATTAAAAAACATCCAAGCAGATGAATGTATGCCTGCCCGAGGGGAACTTTCTGGCCATGGGAGCGTGAACACCGTTCATTCCTGGGATCAAgATGAAATTGGGATGCCAGCCCCTATTTGGGAAGGGAAACCAGAGCCACTTAAGCGCTACGCTTGCCTCTATTGCGACGAAGAGTTTCCTTGCCCTAAGGAAAGGCGAGTACACGTGGCAGCAGTTCACTGTGCAACTACTGATACTAAACCGGATCTTTTGAAAAGACAACGAGCTATTATGTGCATTAAATGCGGTCTTCAATTGGAGTCTTTGAAAGAACTCAGGATTCACATCAAATCGGAGCACAAAAAAGTGACGAGGCAATGCTGCGTGTGCCAGGAGGAGTTCAAATCTCAAGAAGAATATACTGAGCACATAGTGAAAATTCATCCTTTAGAATGCAGAACATGCGGAAAGACTTTCAAGAGCAAAACGAGCCTCGTTGGCCACGCTAAAATTCACCTGATTGTCAAGCCCCACGCCTGTACCCTCTGCCCGAAGACGTTCATCACTaaccaaaaattgaaggaaCACATGAATGGTCATACAGGGTATGCCCCTATTCAGTGCAATATGTGTGACAAGAAATTTAAAAGGTATTCAAACTTGAAGCAGCATAAAGACAGCGTTCATTTCCAGTTGAAGAAGCAGGCGAAGGAATTTTTCTGCGAGTGCGGCGAAACTTTTTCAACCAAGAAGAAACTGGAATGGCACAAAGAAACCCACGATGAAAAGCCAAAACAGTGTATGTACTGCAGCGAACGGTACATTCACAGTGCCAGTCTCACTCGGCACATAAGAAAAGCTCATAATAACGAGTACTTGCCAGCTGATGGCATAAAGAAGAAGAACGTCGTTTGTCCTATATGTAACTTGACGTTCGTGGAAACGTCCCTCAGAGCTCATATGAAGCAGCACGGAACTGTCAAACAGTTCGGGTGTATTGTGTGCGGTAAGAAGTTCTACACTAAGTGGAATCTTCACCTACACCGTTGGACTCACGCTTCCCGAATGTCCAAACCGTACAAATGTACTCTCTGCAAGAGCGCTTTTCTGCGCCAAACTGATCTCCAAGCTCATATCCGAACTCATTTCAACAGTAAACCATTCACGTGCAATCATTGCGGTATGCAGTTCACCAGAAAACACAATTGGAGCCGACACGAGAAAGAACACCTAACCGAGAAGAAGTTCATTTGCAATGATTGTGGTAAAACCTTCCACCGGCAATATTATCTAGTCGAGCATATGAGGTCGCATACTGGAGCCAAGCCATTCTCCTGTCATATTTGCAACAAAACATCGTCCACTAAATCCAACCACAATAAACACATCAAGACCCACCATGCTCGGGAAGCTGTCAATACTGAATCATAA
- Protein Sequence
- MDGLVACPVCTLYLREGMSLNSHLETHPKDQVIEALVRAVSDRERASGLHPHSAIINPFQVVSEEHIFFGRQQVTTNILAPLMTYPIYQQQPVLHGSPHHEQFIQQSAHQPQMQHAQQDELGDGRRAQDMPVSLTTNVNSPGNEVMTTLINVQPGQQEFRQGSPETVPLSMVEVEEKCDYEDMVKADTRMLIHVTDDEECESQGGRPTEETQTFTVPTPTSVIHTPIDHANNTQSIIALANVERDSSQDQFITSDFQDEDARHSEDFIDDSNHDYGDDEDDVHHMVEHQRRLYMEEQEDDVEARSDSGLKNIQADECMPARGELSGHGSVNTVHSWDQDEIGMPAPIWEGKPEPLKRYACLYCDEEFPCPKERRVHVAAVHCATTDTKPDLLKRQRAIMCIKCGLQLESLKELRIHIKSEHKKVTRQCCVCQEEFKSQEEYTEHIVKIHPLECRTCGKTFKSKTSLVGHAKIHLIVKPHACTLCPKTFITNQKLKEHMNGHTGYAPIQCNMCDKKFKRYSNLKQHKDSVHFQLKKQAKEFFCECGETFSTKKKLEWHKETHDEKPKQCMYCSERYIHSASLTRHIRKAHNNEYLPADGIKKKNVVCPICNLTFVETSLRAHMKQHGTVKQFGCIVCGKKFYTKWNLHLHRWTHASRMSKPYKCTLCKSAFLRQTDLQAHIRTHFNSKPFTCNHCGMQFTRKHNWSRHEKEHLTEKKFICNDCGKTFHRQYYLVEHMRSHTGAKPFSCHICNKTSSTKSNHNKHIKTHHAREAVNTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00930618;
- 90% Identity
- -
- 80% Identity
- -