Basic Information

Gene Symbol
ncor1_1
Assembly
GCA_031894815.1
Location
JAVIWC010009434.1:662384-676262[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-09 1.1e-05 26.7 0.0 3 43 496 536 495 538 0.97

Sequence Information

Coding Sequence
ATGGAGGCTGTTGTCCATCTGGATCGCTCTGCTACAATGCCCTCACAGTCCCAGATGGCTTACTCGAGACCATCATCACTTCATGGacGTCAGAACCAACCTTCAGCTGACATGTGTTATAAGCCAAACAGCTCTGCACCAATTATTGCTGGTGGACCTCCTAGCTCTGGTCCAGGGATTATTGCTTCATCATCCGGAAGCAACACGAGACATTCCCCAGCAACATTTTCCTCAGGCTCGTCTAGTTACAACCCAATGAGATATATTCATGCAACTCCACCATTCCCTCCTAACACAGGTGGCGCTCCAGTATCATTCAGAGAGAACCTCTACTCTTCTAGGAGTTCAAATTTAGTTGGAGAACGGGGGCAACCAATGATGGAGTATGGCTTAAGAAGTGATAATATGCCAGTTCAGAGTAAACCTAGAATATCTCTCCTTACTTCACCTGAGTATATGTCTTCATTATCAAATAGACGCCACCATCCtgaGGATTCATATAGAGGTCCTATTGTTCCTCCTGGTCACCAACCTTTGGAAGTCAGTGCTTCTTCCAAGAAAATACGCTTGGGGGACGGGAAGTCTGATTTACAGAGAACTCTGCGAATTGATACAAGGGCTCTCTCTAAACAAGAAGATGGTCAACAGGCTACAGCGTACACCCCACAAGTAGAAGCAATATCACCTACTCTTCCAACAGAAACGCTTCAAGATGAGACGTTTAAATCTACTAAAGATGAACTCCTTCATGGAATATCCAAAGTTGACAGAGAAATCACCAAAACTGAACTTCAAATATCCACACTCAAACGGAAACAGCAAGAGTTGGAAGAAGCTGCCAAAAAGCCTGAAGTGGAGGCAGAAGAGGAAGAAGTTCCTCAACCCAAACATCATAGTCCTGCTCAGAAAATTTATGCGGAAAACAGgAGAAAAGCTCAAGAAGCTCATGGTCTTCTTAAACATCTTGGACCAGCAATACAGTTGccTCTCTACAATCAACCCTCTGACACTGTGGTCtatcatgaaaataaaagaaaGCATCAACTATTCAAAGATAGGTTGATGTTGCACCTCAGGAAAAAGCACATTGAGCGAGAAGGACGGGAAAAGCGTCTTACTGCCACCTACTCAGTTCTTGTCCAAGAATGGTTGCGAAAAGTAGATAAGGTGGAAAATTCGCAGAAGAGGAAAGCACGAGAAGCCAAAAATCGTGAGTTTTTTGAGAAAGTGTTTCCTAGGTTGAGAAAGCAAAGGGAAGACCGTGAGCGGTTCAATAGGGTTGGAGCCAGAGTCAAAAGTGAAGCAGATCTGGAGGAAATTATGGATGGACTGCAAGAGCAAGAGATGGAGGATAAGAAGATGAGATCTTATGCAGTTGTTCCACCTCTTCTTCTTGATGCCAAACAGAGAAGCATATTTTATATTAACAATAATGGTAGAATTGGTGATTTTCCTGCTGAGTATAAAGAGAGGCATCTATTGAATGTGTGGACTCAGTCTGAAAAAGACATATTCAAAGAGAAATTTCTACAACATCCCAAAAACTTTGGTGTTATAGCATCCtatttggaaaagaaaagtGTTAGTGATTGTGTTCAGTACTACTACCTTAGCAAGAAGACTGAAAACTACAAGCGCCTTCTACGTAAATCCAGAGTGAGGTCTAGGTCTGGCCGAAACCCACAAGCTAAGGTGGCAGCTGGTTCAGTTCCATCAAACAATGCCGATTTGCTGAGCACTGCTACTGGGGTTACCACTCGATTCCAAAGAGAACAACTCCAGAAACAGGAGCCTATTCCATCCACAAGCACTGCTGAAACCAGACCTCCACTTATAAGTGAAGGGGATACTCAGCAACAAAACACTGAACAAACTTTCATGCCAGAAAGTCCACCCTTAGAACCTCCAACACTGCTGTTACAGCACACGGAAAAACCTGAAGAAAAGCCAGAAGCAGAATCGGTAGAAGTTATGAAAAAGACGATGGATCCAGAGAGCTCAGATGATGATCAGTATGAAAGACCATGTGgTGATATTGTCAGCCCTTCTGAATGTGAAAAGGCTGGTGGTTGGTGTGATAAGTAG
Protein Sequence
MEAVVHLDRSATMPSQSQMAYSRPSSLHGRQNQPSADMCYKPNSSAPIIAGGPPSSGPGIIASSSGSNTRHSPATFSSGSSSYNPMRYIHATPPFPPNTGGAPVSFRENLYSSRSSNLVGERGQPMMEYGLRSDNMPVQSKPRISLLTSPEYMSSLSNRRHHPEDSYRGPIVPPGHQPLEVSASSKKIRLGDGKSDLQRTLRIDTRALSKQEDGQQATAYTPQVEAISPTLPTETLQDETFKSTKDELLHGISKVDREITKTELQISTLKRKQQELEEAAKKPEVEAEEEEVPQPKHHSPAQKIYAENRRKAQEAHGLLKHLGPAIQLPLYNQPSDTVVYHENKRKHQLFKDRLMLHLRKKHIEREGREKRLTATYSVLVQEWLRKVDKVENSQKRKAREAKNREFFEKVFPRLRKQREDRERFNRVGARVKSEADLEEIMDGLQEQEMEDKKMRSYAVVPPLLLDAKQRSIFYINNNGRIGDFPAEYKERHLLNVWTQSEKDIFKEKFLQHPKNFGVIASYLEKKSVSDCVQYYYLSKKTENYKRLLRKSRVRSRSGRNPQAKVAAGSVPSNNADLLSTATGVTTRFQREQLQKQEPIPSTSTAETRPPLISEGDTQQQNTEQTFMPESPPLEPPTLLLQHTEKPEEKPEAESVEVMKKTMDPESSDDDQYERPCGDIVSPSECEKAGGWCDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00930282;
90% Identity
-
80% Identity
-