Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_031894815.1
Location
JAVIWC010003128.1:2902257-2905004[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.21 4.1e+02 2.5 0.0 3 19 165 181 163 208 0.84
2 6 1.1 2.1e+03 0.2 0.5 22 40 229 248 228 250 0.90
3 6 3.7e-08 7.3e-05 24.1 0.3 1 38 260 299 260 304 0.93
4 6 1.5e-08 2.9e-05 25.4 0.5 2 43 313 358 312 359 0.93
5 6 1.4e-05 0.028 15.8 0.0 2 44 369 410 368 412 0.94
6 6 1.1e-15 2.2e-12 48.1 0.4 2 41 420 460 420 464 0.96

Sequence Information

Coding Sequence
ATGTCCGAAGAAGAACATGATGACTACTCTTCGATTTCCGATGATGAAGACGAAGTTAAAGATGTTGAGCTGATGAACGACATTCTTCAGTCAATTGATAATTTACAAAAGTTGCGCCATCCTTCGGATGCTCCTTCTCCTAGCTGTTCAGGTGATGAATTAGACCAGGCTGTTAACTTGGATAATCTGACGCTGATAGAGCTGAACGTAATCCTTGATCAAGTTGCACAAGCAATTGAATGTAACAATGCTCTCCAAAGCGAATTGCTTATGAAAGAAGTTAAACTGTTATCAATCAAAAGACATATTCAGATCTTCAAGTTGGGAAATGGTTCGAACTCGGCAAAAAGCGAAGAATCCAAAGGTGATATTGGGAAGTATATAGTTAAATTCAAAGCTCCATACTTCAAGGACCACAGAAACTTTGCTAGCTATAATATTGTTCCAGAAAAAGATTTACCTTTCTCTGCTGCAAGATATGAAAAGGCATCACCTTGGACGAAAATGGAATTACGAGAACTGGAGTCCTGTatcaaaaaattcttaactCACCGCTCATTTCAGagtatgatgaaaaataatCCTAACAGTTTGgcagagaaagaaaaaattataaataggtaCGCTTATCTCAGGAAAGCTAGTTTAAACACTTTAATACCTGATGACTTTGACAAAATCATTGATTGGTGTCACGTAGCTAGCAGAATGAAGAAGAATCACTCGCCTTCCGAGTGTCAAAAGGCGTGGGATATTTTCTTAAAGCCGGGTATCAACAAGAAAAAGTGGAGTAAAGCagaattggaaaaactcaaGAAATGTGCTCTTGAGAGAAATTATGAGGACTGGGACGCTATAGCTGAAGACCTTGGCACCAATCGTTCTGCTTACCAGTGTTTTCATGAATATGCTGAGTCGTTAATGAAACTACAGGAAGGTGAATGGTCCAAGGCTGAAGAGGAGTTCCTGATTGAATTGGTGAAAGAGTGTACATACGGTGATAAAGTGCTCTGGCATAAAGTGTCATATTACTTTGAAACTCGCTCACTCGCTCAAGTCTACCGTAAATGGAACTTGTCTTGTGTTGGTAAAACTAACAAAGTTGGTCCTTTTGACGAAGAAGAAGATCAACTTATCATTGATTATCTTATAATGAAGTCTGGAGACGTCAACCGGGTGGCTCGCCGTTTAAATCGTTTGCCAAGCCAGATTAGGTACAGGCTTTCCCAATTGAAGAGTTCTCTAAAACATCGGTATGGAGAATGGACTCTAGAAGAGGATGAACAGCTTTTGGCTCTCGTCAAAAAGTACGGTAAACAAAAGTGGGCCGTAATTGCTGAGCACCTGCCGAGCAGAGGAAGGGTGCAAATCAGGCATCGTCACAGACATTtgatgaatcaaattgataaaaatccaGGAAGAAAGTTGGAAGATTTACATCGTCCAAAGAGGCCTGGtcataaaaacagaaaacaaagtaACATTAAATACGTACTTGAAAAGAAGACTATTATTAGTCCGGATGAAAGCACTGCAACAGTTGATAAAGTTGTAGGGCTTTCCACACCGTTTGGACCATTGATATTGCACAAAGATGATGTGGAAGGGGTCGTGATTAAAAATACGAAGAAAGGGCGGCCACGTGCAAGACGAAAGCAAGTAAGTAATCGAACGAATGTCCACGAAGTTGTCCTTAATAATGAAGATTCCGAAAGTTTTGTAAGCCTCCCCAATATAGAACAAAGTAGTGAAGATAACGTTGCTATTTCTTCTACCACTGATCAAATAAGACAAAGTAGAAATAGATCGAAAAAACTGGAAGACTCTAAAAGCAAAAAGaataaagcaaaaacaaaaaaggttGCAGCACCAAAACTCCCAGCAGACCTATCACCtgcaattttgaattattattcttttatatCAGAATATATTGGGGATCCTGTGAAACCATCTGATGTTTGTGATAGTGAGCTTGAAACAGAAGTAACCAACGCTCTATTGAGATTTAAGCCTTATAAATACTTCAACAAGGAAAATGCAGATTGGTGGTACACTGCTGATCGTACAGATCCTTATTACAAAGATGTGTTCACTCATCTTGAAAGAAAGAATAAGGATGATTATGAAATCAAGGAAGGTGCTGACTGGTTGCTACCTCCTTGTATGACGTCCTTTGTGGGGTTCCAGAACCTTCTCATTGATATCGATTATAAACCTGAAGATTTTGACATGACTCAAGATCAATTGGATGAAGAATTGAATGAGTTGTATTGCAGTTTGGACGAAGAAACAATAAATGCAGTTGCCAGATGGAAACAACGACTGAAAACTCTTTTTCTATGGCCAGCTGCTTTGTCAGAGATTGAACTCGACAAACATGAATCAGGAGATGctgatgaaaacaaaagttGCAGCCAGGTACTGAACGAGAGTGAAATCATTAAACTGGCGGAGGAGTTGAACGAGATTGAAGACGACGAGTTGAGAGCTGTAATGGTGAAGCAGCTAGGTTTGGTTGACGGATCGAATCAAAATAATGAGAATATAGATCGCCTGAGTATGCTGGTTCTGCAGGATGACTTGTCCATTCAGGTTAAGCCTAGGATTCAAGAAAATCCAGAAACCCAGGAAGACGATCCTGATACCGAACGCTGTACTGAAGTCATGGACTTAGTGGATTGTGTGAAAAGTGAACCAAACGATTCAGCAGCAGAGAAAAGCGATGCTGAATCAACTTTGGACTAG
Protein Sequence
MSEEEHDDYSSISDDEDEVKDVELMNDILQSIDNLQKLRHPSDAPSPSCSGDELDQAVNLDNLTLIELNVILDQVAQAIECNNALQSELLMKEVKLLSIKRHIQIFKLGNGSNSAKSEESKGDIGKYIVKFKAPYFKDHRNFASYNIVPEKDLPFSAARYEKASPWTKMELRELESCIKKFLTHRSFQSMMKNNPNSLAEKEKIINRYAYLRKASLNTLIPDDFDKIIDWCHVASRMKKNHSPSECQKAWDIFLKPGINKKKWSKAELEKLKKCALERNYEDWDAIAEDLGTNRSAYQCFHEYAESLMKLQEGEWSKAEEEFLIELVKECTYGDKVLWHKVSYYFETRSLAQVYRKWNLSCVGKTNKVGPFDEEEDQLIIDYLIMKSGDVNRVARRLNRLPSQIRYRLSQLKSSLKHRYGEWTLEEDEQLLALVKKYGKQKWAVIAEHLPSRGRVQIRHRHRHLMNQIDKNPGRKLEDLHRPKRPGHKNRKQSNIKYVLEKKTIISPDESTATVDKVVGLSTPFGPLILHKDDVEGVVIKNTKKGRPRARRKQVSNRTNVHEVVLNNEDSESFVSLPNIEQSSEDNVAISSTTDQIRQSRNRSKKLEDSKSKKNKAKTKKVAAPKLPADLSPAILNYYSFISEYIGDPVKPSDVCDSELETEVTNALLRFKPYKYFNKENADWWYTADRTDPYYKDVFTHLERKNKDDYEIKEGADWLLPPCMTSFVGFQNLLIDIDYKPEDFDMTQDQLDEELNELYCSLDEETINAVARWKQRLKTLFLWPAALSEIELDKHESGDADENKSCSQVLNESEIIKLAEELNEIEDDELRAVMVKQLGLVDGSNQNNENIDRLSMLVLQDDLSIQVKPRIQENPETQEDDPDTERCTEVMDLVDCVKSEPNDSAAEKSDAESTLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-