Cdil022680.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010004304.1:506280-506852[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-07 0.0002 22.3 0.0 1 34 11 43 11 53 0.89 2 2 7.2 4.9e+03 -1.4 0.0 12 23 128 140 127 142 0.77
Sequence Information
- Coding Sequence
- ATGCCTCCtcaaaaacgaaattccaaGTACAAGCCAGAAGATGTTCAAAGAGCTATGGACGACGTCCGCCGAGGGACCCCAGTTGCAGCTGCAGCAAGAGCTCATGGCATCCCAAGAGGAACCTTGATTGATAAGTTGAATGGTACATCGACGGTGGAGGCAAGAATTGATCGTAAATCCATGCTAACAAAGGACGAAGAAGATATTTTGGTGAATTGGGTTCTCACTACTGCCAAGGCAGGTTTTCCTGTTTCCATTTCTCAATTGTGCAACAGTGTTCAGCAGTTAGTCAGACGATTAGGGAGGGAGAACCCTTTCACAAATGGTCTTCCTGGGAGAAAATGGGTTAAAGCCTTCCTGAATAGGAATCCTGAAGTTTCTGTCAGAACTTCAGAAAATTTAACCATTTCAAGGGCCTCTATAACCGGAAAACGGATTCGTTCTTGGTACGTTGAAGTTCAGGACTTCATAAAAGAAAATGGTTATGAGATGGTTAAGCAGCCCCTGTTTTGGAAAAAGCCTCTATTCTGGAAGAAGCCCCTTTTGAGCAAGATATTTCTGATGTTGATTTGA
- Protein Sequence
- MPPQKRNSKYKPEDVQRAMDDVRRGTPVAAAARAHGIPRGTLIDKLNGTSTVEARIDRKSMLTKDEEDILVNWVLTTAKAGFPVSISQLCNSVQQLVRRLGRENPFTNGLPGRKWVKAFLNRNPEVSVRTSENLTISRASITGKRIRSWYVEVQDFIKENGYEMVKQPLFWKKPLFWKKPLLSKIFLMLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -