Cdil034823.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010008147.1:34141-36171[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-06 0.0054 17.7 0.0 1 39 11 48 11 54 0.88 2 2 0.2 1.3e+02 3.7 0.0 27 38 352 363 348 367 0.85
Sequence Information
- Coding Sequence
- atGGCCCCTCCGACTAAGAGACCAAAATATTCAGAGGATGCTATGAATAGAGCCTTGGCAGATGTTGCATTAGGTGTCCCAAAATCGACAGCAGCTAAGCGCCATGGGGTCAATAGAGTGACACTTTTGAATAAGGTGAACGGAAAACATCGCGCAGAACAACGAATGGGTCCGGATGCAGTCctttcaaaagaagaagaaagaatactTGTCTTGTGGATTCAGTCCATGGCTAGAGTGGGCTACCCTGTTACTCGATACAATCTTCTAGACAGTGTTCAGCAACTCATGAAGCGTTTGGGAAGACCCAATCCATTCACTGATGGACGACCAGGAAAAAAAATGAGGGATACGGTCCCCTATGCCAAAAATATCTATCAAGTGGTGAATTCCGACGAGAAGGAATGCCTCACTGTTTTGATTACAGCCAACGCTAAAGGTGAAAAATGCCCGCCATTGATCGTGTTTAAATACCAGAGAATACCTCAAGACATTGCCTTCTCTGTTCCTTTTGACTGGGGAATAGGCAGGTCTGACTCTGGTTGGATGACCAGCGCCGTGTTTTTCGAGTTCTTGGCCAATATTTTTCACCCGTGgcttttgaaaaacaacattGAGCTCCCAGTGATACTGTTTATTGACGGACATTCATCTCATATTACGCTGGAAGCAAGTGAGTTCTGTGACAGAAACAAAATAGTGTTGATAGCACTTCATCCTAACGCAACACATCTGATACAGCCACTGGATGTGTCATTATTCAAAGCACTGAAGAGTATATGGAAGAAAAAAGTACATCAATGGCGAATGGATCACCCAGACAACCCTTGCCTGCGGAAAAAAGATTTTGATCCACTTCTAAATGAAGCTCTAAATGAGGTTACCACCTCCACCATAAGCAATGGTTTCAGGAAGTGTGGATTGGTACCTTGGGATCCTCAGGAAGGCGTCAAATCTTTGGCAGAATTAGAGCCTGTGATTCATGATAACATAAAAACCATCGATTCCAAAGATGAGAAACAGAACCGAGACGCTTTGACTGCGATTGAGGCTAACATCCCGAAATCGACGCTGCAGTTATTCAAACAACAGGGGAAAGTGTATGCTGGGCGTTTGGAAGATGCGTCACTCTTTGAACTGTGGAAAACCATCAAGTCCAGGTGTGCCAGTGAGGAACAAGGCCCTGTACAACATCCTTGTGATGGTGGCGATTATGTCAACAATGTAGAGGGGTTAACCCTGATCCTGTTCAAGTTGGTGTTATTGAATATGAAGGTGTCGTCGACAATATCAACAGTTCCAATAACAATAACCAAACAACAGATGAAGTTGAAACCCAACACAACAATGGAGAAATCGTTGTTGAAAACATCAGAAGCATTGAAGGTTCCTCAGCCCATATTCCTGGTCAAAATGGTACAGAGGCGAATGCTTCAAATGATGTGTTGGCAACGATCCCTAGTCCTTTCAAGAAAGCACTAA
- Protein Sequence
- MAPPTKRPKYSEDAMNRALADVALGVPKSTAAKRHGVNRVTLLNKVNGKHRAEQRMGPDAVLSKEEERILVLWIQSMARVGYPVTRYNLLDSVQQLMKRLGRPNPFTDGRPGKKMRDTVPYAKNIYQVVNSDEKECLTVLITANAKGEKCPPLIVFKYQRIPQDIAFSVPFDWGIGRSDSGWMTSAVFFEFLANIFHPWLLKNNIELPVILFIDGHSSHITLEASEFCDRNKIVLIALHPNATHLIQPLDVSLFKALKSIWKKKVHQWRMDHPDNPCLRKKDFDPLLNEALNEVTTSTISNGFRKCGLVPWDPQEGVKSLAELEPVIHDNIKTIDSKDEKQNRDALTAIEANIPKSTLQLFKQQGKVYAGRLEDASLFELWKTIKSRCASEEQGPVQHPCDGGDYVNNVEGLTLILFKLVLLNMKVSSTISTVPITITKQQMKLKPNTTMEKSLLKTSEALKVPQPIFLVKMVQRRMLQMMCWQRSLVLSRKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -