Cdil034709.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- TIGD6
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010008138.1:759656-761059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-09 3.3e-06 28.0 0.0 3 39 17 53 15 57 0.90 2 2 3 2e+03 -0.1 0.0 16 24 156 164 150 165 0.81
Sequence Information
- Coding Sequence
- ATGCCGAGAGTATACAAGAGAAAAACAGACCGCCAAAAATGGAGTCAAACTAGTATGGAGAGTGCAATTACTGGAGTCATGTCTGGAAGAATGGGATACAAGAAGGCATCATTGGAATTCAATGTGCCTCAGACTACCTTGGAGGACAGAGTTcgtaaagcaaaaaaaaatgttttaacacCTGGACAAGCTGCAACAAAAGGTATGGGATCTAGAACcactattttttccaaaaagcaaGAAGAAGAGCTAATCAAACACATTCTGATGATGGAGAATAGGCTATTTGGATTGACACGAACCGATATTCGAAAACTTGCTTATCAATTAGCAGTCAAAAACAATATCAATCATAAGTTTAATGATGAGCTTAAAATCGCTGGTAAGGATTGGTTGCAGGGGTTTTTGAAAAGACATAAAGATAAACTTTCATTGAGATTGCCTGAAAAGACATCCATTTCACGTGCAATGGGCTTTAATAAAGCTGCTGTGGAGAAATTTTTTGACCTTCTTGAAGGTTTGTatcttgaatacaaattttccccAAATGACATTTATAATGTCGATGAAACAGGCATAACAACGGTACCAACAAAGCCCTCTAAAGTCCTTGCCATGAGAGGCAAGAAACAAGTTGGTGCCCTCACATCTGCAGAACGTGGAATTCTTGTAACTGCAGAAACTTGCATGAGTGCAGCAGGAAACTTCATGCCAACAATGTTTGTTTTTCCTAGAGCCAGAGAAAATGCATTGCTACTTGATGAAGCTCCACCAGGGAGCTTTGCAAAATTTCATCCTAGTGGGTGGATGCAGAGTGATATTTTCCTTTTCTGGTTCGAAAAATTCATTGAGTTTTCCAGACCAAGTGCTGAAAAACCAGTTCTTCTAATATTGGATGGGCATGCAACTCACACGAAGAATCTCGAATTAATAGAATTGGCTCGTGCAAACCATGTTGTTCTGTTATGCTTGCCCCCACATTGTTCGCACCGCCTACAACCACTAGATGTCACATTCATGGCACCTCTCAGCACCTACTATCAACAAGAAGTTCGACAGTGGCTTGCTATGCATCCAGGACGACCAGTGACCATTCATCAAGTTGGCAAACTCTATGGTAGGACCTTTTTGAAAGCAGCTGTGATGCAAACAGCGGTTAATGGATTCGAACAGACAGGAATATATCCACTGAATAGAAATATATTCCCAGAAGACCTCTTTGCACCATCACTGACAACAGATAGACCTGCACCTGAACCAATGTTTGAAGAGAATATCATAGAAGCTACTCAAAGAAAGAATCAAGACACTGCCAACCAGGAAGATTTGACTGACATGAAAACACCACAAAATCTCAAAAGCCCACAACGTTCTACAAAATGCTGCCTGGTCCATCTTACTTGA
- Protein Sequence
- MPRVYKRKTDRQKWSQTSMESAITGVMSGRMGYKKASLEFNVPQTTLEDRVRKAKKNVLTPGQAATKGMGSRTTIFSKKQEEELIKHILMMENRLFGLTRTDIRKLAYQLAVKNNINHKFNDELKIAGKDWLQGFLKRHKDKLSLRLPEKTSISRAMGFNKAAVEKFFDLLEGLYLEYKFSPNDIYNVDETGITTVPTKPSKVLAMRGKKQVGALTSAERGILVTAETCMSAAGNFMPTMFVFPRARENALLLDEAPPGSFAKFHPSGWMQSDIFLFWFEKFIEFSRPSAEKPVLLILDGHATHTKNLELIELARANHVVLLCLPPHCSHRLQPLDVTFMAPLSTYYQQEVRQWLAMHPGRPVTIHQVGKLYGRTFLKAAVMQTAVNGFEQTGIYPLNRNIFPEDLFAPSLTTDRPAPEPMFEENIIEATQRKNQDTANQEDLTDMKTPQNLKSPQRSTKCCLVHLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -