Basic Information

Gene Symbol
-
Assembly
GCA_031894815.1
Location
JAVIWC010009075.1:677434-678660[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8e-17 3.6e-13 51.0 0.0 1 48 18 65 18 91 0.90
2 2 3.2 1.3e+04 -2.1 0.0 17 17 126 126 101 160 0.60

Sequence Information

Coding Sequence
ATGGCGCAAATGAAGCAAGAGCAAAGTGAAGATACCTACGATTATGATAAAGAAAAGGAACGTTTCTTGCAAGAGTTGAATCATTTCCATGAAACCAGAGGGACCCCCTCAAGGCGACCACCGCAGGTCAACGGTCATGAAATTGATCTGTACAAATTATACACCCTCGTTACTAACCGAGGAGGATGGATCAAGGATGATCAGCTCATTACCGTCATACACACAGTTGTTAACTGGCACCTAACAGCACATTTCAGCAAACTACTAATCCCGGCTGTAATATTTGCTGAATCCCATTCCCTTTTTATGGCCCTGTACTCATACAACAACCATACCCTCTGCACAACAAGCACCACCCAAATTCATGCTCAATATAATTATAGTTACCATCCTATCATTTACGGCCACGGTTCAGTAGTGGCCAAAATATTGCATGTTATTGTGCATAGAAAGAAAGCCGGTCAATACGTGAAGGATAACAACGCCAGCTGA
Protein Sequence
MAQMKQEQSEDTYDYDKEKERFLQELNHFHETRGTPSRRPPQVNGHEIDLYKLYTLVTNRGGWIKDDQLITVIHTVVNWHLTAHFSKLLIPAVIFAESHSLFMALYSYNNHTLCTTSTTQIHAQYNYSYHPIIYGHGSVVAKILHVIVHRKKAGQYVKDNNAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-