Basic Information

Gene Symbol
kdm5bb
Assembly
GCA_031894815.1
Location
JAVIWC010006522.1:146447-150826[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-19 1.7e-15 58.4 0.0 3 88 98 178 96 179 0.94

Sequence Information

Coding Sequence
ATGGATCGCTCTTCTAGCCAAAGTCCAAATGGGAAATCCTCGCCCAAAAAAGGGggtaaaaaattcgtttttgaaCCTCCGCCTGAAGCGCCTGTTTTCAAACCGACTGCGGAAGAATTTAAAGATCCATTGGAGTACATTAAGAAAATACGTCCCATAGGAGAAAAGACGGGGATTTGCAAAATCGTGCCACCCAACTGGAGAAATCCCTTCGCCTTGGATATGGACACTTTAAAGTTCGTACCTAGAATTCAGCGAATAAATGAGCTTGAGGCGCGTACCAGGATAAAGCtcaatttcaatgataaactGACGAAATTCTTCGCCCTGAGTGGTAAAACCTTCCAAGTTCCAGTTATGGAAAAGACATCTTTAGATCTCTATACACTTCATAGAAAAGTTAAAGAACATGGTGGGGTGGATGttgtcaacaaagaaaagaagtGGGGTGATATTGCTATGAGTATGGGTTTATTGTGCAAAACTGCACCGATCACGCTGAAAAACCACTATGATAATCTGATTCAGCCTTTCCTACTATCTCAATCTAAAAACAGCGAAGAATCTAATGATGGAAACAAAGAGAATCTATCCaacgatgaaattgatagggaTAATGAAACTGGCGAGGGTATCAACAAGGGAATCtcaatgaaatcaggaaaaGGAGCCTCAGCTATGCGGGAGTTGAAAAGTCTAAGGTTTTTAGGACCAGGACCCAAAATGGCCGTTTGTGATGGAGGTGTACTACAAAAAGGTCTGAGAACCAGAGGTAAGAAAATCATGTATGAGTTTGATCCATTGGCCAAATATATGTGTAAGGGCTGCAAAAAAGGTGACATTGAAGAAACGTTTTTGGTAATGTGTGTCACTTGTGAAGATCGATATCATCATTCATGCTTGATCCCACCATTGTCCCCAGATACACCACCAATTAATTGGAGATGCCCCAAATGTGTGGCTGCTGAAGGGTACAAACCCCTGGAAGAGTTTGGTTTTGCCCAGGCGGAAAGGGAGTACACGCTAAATGAGTTTAAAGCCATGGCCAACGAGTTCAAgagaaattatttcaacatgGACCCTGATCAAGTTGAACATTCTACTGTTGAACAAGAATTTTGGAGAGTTGTTTCTTCAATAGATGAAGCAGTAACAGTTGAGTATGGTGCTGACTTACATGTTATTGAGCATGGTTCTGGCTTTCCTCGGATTGGCCAGCCATGTGTTTCTGGTGTTGATCCCAAGAAATTCGAGAAGTATGCTAACTCTCCTTGGAATCTCAACAATCTACCCGTCCTTGAAGATTCTGTTCTTCGGCATATAGGTGCTAATATATCAGGGATGAAGATTCCTTGGATGTATGCTGGCATGTGCTTTGCTACTTTCTGTTGGCATAATGAAGATCACTGGAGTTACtccattaattatttacatCTTGGGGAAGCCAAAACCTGGTATGGTGTCCCTGGAAGTTATGCAGAACAGTTTGAAGCTGCTATGCAAAAAGCTGCGCCAGAATTATTCGAAAGTCAACCTGATTTACTTCATCAACTAGTTACGATAATGAATCCAAACGATATTATGGCAGCAGGTGTTCCAGTTTATAGGACTGATCAGAAAAGAGGAGAATTCGTTATAACATTTCCCAGAGCCTATCACGCTGGTTTCAACCAAGGTTTCAATTTCGCTGAAGCGTGCAATTTCGCTCCTGCTGATTGGCTTGTCATTGGCCGTGAATGTATCTCACATTATTCCCAACTCAGGAGAACGTGTGTTTTTTCACATGATGAACTAGTTTGCAAAATGGCCATTAAATTTGACACTTTGGAAAGAGATATGGGACTAGTTCTTATGAAAGATTTGTCGCTTATGGTTGAATCAGAAAGACTACGGCGCACAAGAGCCTTGAAGCTTGGAGTTGGAAAAGCGGCTAATgtcgattttgaaaagttaccAGATGATGAGCGACAGTGTTGTGTCTGTAATACGACCGTATTTCTATCTGCTGTCGCGTGTCCATGTGATTACACACGGTTAGTTTGTTTGGACCACATTACGAAATTATGCAGTTGTGATCCCataaattatattatgaaaTATCAACTCAAACTTGATATTTTACAGAATTTGTTAGGAGTTATCAGTTCTAAATTATGTGGTTTTGATAATTGGACAACCAGAGTAGAGGAAGCACTAAACGGCAAAACTGAAAAGAAATTCTCCCTCAGAAAACTCACTGAGCTGCTAGTGGAAGCTAAAGAAAAAGAATTTCCTCATAGTGAGCTTGTTGAATTGCTTGAGTATCATGTTAGAAGATGCATCGAGTGCTCTGCATTGTCTAAAGCACTTGTCTCAAACTGCAGCAAGAAAGATAATCCCAGTAAAATCACTGTTGATGACCTTGAGCTGTTCTATCAAGAAATACAAAAACTACCTTGTTCGATCTCCGAAGAAGCTGCAGTGAAAGATATTCTTGATAAGGCGAAGAAATTTCAGAAGTACGCCCAAAGGGTTCTTAGTATGAAGGATGTCCATAAAGCTCGAGTTTTGTCATGCTGCAAAATGGGGCAATCACTCAATTTGGATTTGCCTGAAATACAGGAACTAGAAAAGAAGATTATGGAGTTTGATTGGGTAGAAAAGGTAGATTTTGCTATTAATGCTGAAGCAGAATTGGATTTTGTTAGTAAATTGGCTGAAGATGGAAAATCTTTATGCGATTCCCCTCTAatagaaaaaacaagaaaagagCTCAATAAATACATTAATGAAAGAACTCCTAGTGATATAGCAATAGCCAATGTTCAATCTATTGCCGAAATGGAAGGAGCAATTATTAGAGGTCCTCCGATCCATTTGAAAGATCAAACGAATGAAATAGAACGATCACTCTTGAAGGTTCTTCATGGTGACGTTGTACTCTACTTACACGAACTGGAAAAATTGGTTGTAATGGCTAAACAAAAAACCCCTGAATCCACCACGTTGAAACAAGTAGTTCACCATGTAACAGTCGCCCGAAATTGGGAAATGGCTGTTGAAACtctattcatgaagaaaaatgatCCTCATACCTTGATGGAAGCACTTTGGCCACGTAAGTTTGTTTCTCGCCATGtctattttacaaaacaattgGCAAAACAGAATACATGTCTTGAATCGTTAGTAGTAAAAGCAGATGTTGATCATTATCGAACGAAAAGTTATAAGCAGGCTTTGCAGCAAGAATACCATACACTTTCCAAATTGAGACTCGACAACTTGCGGAAAATGGACACTGACGATTTCGGTACTGTCAAGTGTATTTGTGGTAACTCTGTGGATAACACTGCTATCGTGTGCGAGCTCTGTAATACAGCTAtgcatttgaaatgttttaaagaaaCCGATGCCACTAGAAGTTCAAAAGTTAATCCGTCCGTCTGGGATGACAATTTCCGATTGCGAAGACTGTGCGGATATTGTAAAAGAACCCATCGCCCACCTATCGATTTGGTAAAGAAATTAGCTGACACTGTTGACGtcttgaaggtgaaaatacCAGAATGTTTCGCTGTCAAGTACAGTTTAGCTCGAGCCGAGAAATGGAGGCGAAACCTCCAAGAGATTATTAATTTAGATGTTCTCGCTACTAGATCAAGAGAAGTTCTTTCATTCTTCCAAAAGTTTCATGCGAAACGTTATTCGGAAGATCAACTATCTGACGAATTATTGACGGAATGCCGTCTCATAATTGGCACTGCAGGGGGTATTCCCAGAACAACATTATTGGCTTTGAAAGAAGAACTTGTACATGGTAACCGATTTGAGGTAACACCTAAAGAACTGAATGAAATCTGGAATATCATACATCCCTTGTCGattcattctgaaattgaatccaAGCTTTATAACAGTCTTTGTTACCCGCTCACTGGCGCGCCTTCTTGTTCAACTCCTAACCTGTCATTGTTGGTGCAGCATGCTAACGCGACGAGGAAAACCGTGAAGAGGAAGATCTTCACTATATCTGAACCAGTCCGATCAGAAGTACCAGGGATTAAGATCGGGTtcaagaaaaggaagaaaaatatcagccagaagaaaaaaacgagGAAACAAACGTTTTCCAACCTAATGCCTTACCTCAATCCAACCGAAGAACACGAACCCGAAGCGAATTGCGCGGCGCCTACTTGTTTGAAGCCAGGGGACGCCGCTGTTGATTGGGTCATGTGTGACGGGGCCTGCAAGCAATGGTTCCATATGAAGTGCGTTGATTTGGATAACAAAGACGTCAACGAGGACTACGAATACATTTGCGCTAACTGTGTGTGCAACAGAGTTTGTGAACTGGTTACCGAAAGTCTTGGCTCCAACGGCGCTGATGAATTATAA
Protein Sequence
MDRSSSQSPNGKSSPKKGGKKFVFEPPPEAPVFKPTAEEFKDPLEYIKKIRPIGEKTGICKIVPPNWRNPFALDMDTLKFVPRIQRINELEARTRIKLNFNDKLTKFFALSGKTFQVPVMEKTSLDLYTLHRKVKEHGGVDVVNKEKKWGDIAMSMGLLCKTAPITLKNHYDNLIQPFLLSQSKNSEESNDGNKENLSNDEIDRDNETGEGINKGISMKSGKGASAMRELKSLRFLGPGPKMAVCDGGVLQKGLRTRGKKIMYEFDPLAKYMCKGCKKGDIEETFLVMCVTCEDRYHHSCLIPPLSPDTPPINWRCPKCVAAEGYKPLEEFGFAQAEREYTLNEFKAMANEFKRNYFNMDPDQVEHSTVEQEFWRVVSSIDEAVTVEYGADLHVIEHGSGFPRIGQPCVSGVDPKKFEKYANSPWNLNNLPVLEDSVLRHIGANISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHLGEAKTWYGVPGSYAEQFEAAMQKAAPELFESQPDLLHQLVTIMNPNDIMAAGVPVYRTDQKRGEFVITFPRAYHAGFNQGFNFAEACNFAPADWLVIGRECISHYSQLRRTCVFSHDELVCKMAIKFDTLERDMGLVLMKDLSLMVESERLRRTRALKLGVGKAANVDFEKLPDDERQCCVCNTTVFLSAVACPCDYTRLVCLDHITKLCSCDPINYIMKYQLKLDILQNLLGVISSKLCGFDNWTTRVEEALNGKTEKKFSLRKLTELLVEAKEKEFPHSELVELLEYHVRRCIECSALSKALVSNCSKKDNPSKITVDDLELFYQEIQKLPCSISEEAAVKDILDKAKKFQKYAQRVLSMKDVHKARVLSCCKMGQSLNLDLPEIQELEKKIMEFDWVEKVDFAINAEAELDFVSKLAEDGKSLCDSPLIEKTRKELNKYINERTPSDIAIANVQSIAEMEGAIIRGPPIHLKDQTNEIERSLLKVLHGDVVLYLHELEKLVVMAKQKTPESTTLKQVVHHVTVARNWEMAVETLFMKKNDPHTLMEALWPRKFVSRHVYFTKQLAKQNTCLESLVVKADVDHYRTKSYKQALQQEYHTLSKLRLDNLRKMDTDDFGTVKCICGNSVDNTAIVCELCNTAMHLKCFKETDATRSSKVNPSVWDDNFRLRRLCGYCKRTHRPPIDLVKKLADTVDVLKVKIPECFAVKYSLARAEKWRRNLQEIINLDVLATRSREVLSFFQKFHAKRYSEDQLSDELLTECRLIIGTAGGIPRTTLLALKEELVHGNRFEVTPKELNEIWNIIHPLSIHSEIESKLYNSLCYPLTGAPSCSTPNLSLLVQHANATRKTVKRKIFTISEPVRSEVPGIKIGFKKRKKNISQKKKTRKQTFSNLMPYLNPTEEHEPEANCAAPTCLKPGDAAVDWVMCDGACKQWFHMKCVDLDNKDVNEDYEYICANCVCNRVCELVTESLGSNGADEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00883577;
90% Identity
-
80% Identity
-