Basic Information

Gene Symbol
Arid4b
Assembly
GCA_031894815.1
Location
JAVIWC010001049.1:39095-80491[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-27 2.5e-23 83.5 0.1 2 89 305 389 304 389 0.95

Sequence Information

Coding Sequence
ATGTATGTTTCAACTTTCCAGGCTGACGAACCACCATCACTGCCCGTTGGTACTGGTGTAAGTGCCAAATATAAAGGTGCCTTCTGTGAAGCCAAGATTAGGAAAGTCGTTAGAAGTGTTAAGTGCAAGATCCTTTTTAAAAATGGTCTTGGGAGCTATACCGTGGGTGATGACCAGATCAAAGGAACTATAAGGACAGGTGCTGTGGTAGAAGCTAGACACCCTGAGAAGAAAGAATATAGCGAAGCCacaattacaaaaattcaaGATGGAAGTCAATACACAGTGGTCTTTGATGATGGAGACATTACTACCTTACGACGAACAGCTCTTTGTTTAAAAAGTGGCAAGCACTTCGCTGAGAGTGAAACCTTGGACCAGCTGCCTCTAACTCACCCTGAACATTTCAGTACACCAGTCATTGGTGGGCGACGGGGGCGTAGAACGAGAATTGGAATaAGTGGCGCTAgcagtgatgatgatgattcatTCCGCCAGTCCAACGACTTCTCTAACTTCAAGGAAACTGAAATTGGAAGAGTTGTTTGCGTTGAAGGAggagaaaaaaggaagaatcgAGACAATTGGTTTCCTGGCCTCATTGTGGCTCCTACAGCCCAAGAGAGTGTCCCCATACGAGTTAGAGACGAGTACTTGGTCAGATCATTTAAAGATGGTCGATATTATACAGTCCCCAAAAAGGAAATCATGGAGTTCAGTCGGGAAATGGGTGCTAAGGCTGAAACAAATTCGCTTAAAACGGcCGTTGAGAAAGCATTACAGTTCCTTGATAGAGATGAGCTTCCTTTACATTGGGACAGAGATCTGTTACTGTATGGAGTCACTGATGCAGGCTCGGACAGCGATCCAGGGGACGATAATGAGAGCTCAGACGATGAACCTCGTGAGAAAAAAGACCACTTCGTGGCCCAGCTTTACAAATTCATGGATGAGAATGGGACTCCTATCAATGAAGAGCCCGTTATTGGCAGTAAAGATGTGGATTTGTTTAGGCTGTATAAGGTTGTTCACAATCTTGGAGGATTCAACAGAGTTACCAACCAAAACAACTGGAAAAACATTTCTGTCAAACTTGGTTTTGGCCACAACCCTGTTGTTGTTGGGATGGTTAAACAAAGCTATAGAAAGTACCTTTTAAGCTTTGAGGAATGGCCGAAACGTCCAGGTTGTTCTATGCAAATACAACCTCGTTTAAGTAGAAGTCGCTACAGAGTTGGGAAAAGCAATGTTGTTAAAGAAAACCCATCTTCTTCCCCtgtcattaaaactgaaaaaGACAAAGTTGTAGAAAAGAGTGTTCAACCTGTTAGTGAACCCGTTACTCCCAAGGGACCTGTTGCTAAGCCAGTTCCCCCAGTTCCAACGAAGGAACCTGCGTTGATTAAACCTCCTGTCACTCCTGTTGTAAAAGAAAAGCCCGCTGCTAAAAAAGCAGCACAACAAAGTACAATAACACCCAGTCAAGTTAAACCCGCTGGAGAGGTGTTCACCAAAGCCTTGGTGAAGGACATTAAAGTTGAGCCTGGGTTAAAATTGCGTAATCCCAAGTTTAAGCCAGCAGAATCCGAAGTATTTTTCGTGAAACAAGAAGTTAAAGAACCAGAGTGCTCGAATCCAGTACCTGCTATTGGAGAAACATCGATTGGCCCGATTAGAGACAAGAAAAAGCGAATGGGCTCTAAAGAAAAACCGAAGAAAGAAGTGCCTCTGGTGAAAGGAGGAAAGGTTGATTGTTTGGCCAACACACGACAAAAACGTGTTATTAAAGAAAGGTTGAAAACAGTTGCAGACTCAATCAAAGGCAGAAGCAAGGCTTCTACTTCTGGTTTGTTAGAAGGTGTAGAGAAGAGTCACCCCGCCAAATCGAAAGTTAAAGATGAAGGAGCAGCGactgctaaaattaaaaaagaagaagttgcTTCGGTATCGGCTGCAACTGAAGATAAGAGGAAGGGAAGGCGAAAAAAAGAAGTGAAGGAAACCAAGGAAAGGACAGAAATGGCCCTAATCAATTGTGATATCCTTCCGACCTACAAAACGATCTCCCTTGGTGATAAATTGAAGGTTTATTATGGACCAACAAAAGAAGCCAAAATTACGTCGTATGAAGCCAAGGTGTTGAACAccaaagaagaaaatggagaaaCTCTTTACTTCGTCCATTATACAGGCTGGAATACACGTTACGATGAATGGATTAGAGCTAGTCGAGTGGCTGACAATCTCTCCTGGGTTGCTGGCAAGGCCTCCAAAAAACAAGCACAGGTCACTACGCCTAAGTCTGCTAAAAGAGAgaagaaatcaatgaaaaccgAAAACTCGAAAGGGGATCACAAGACTAGTGGCAACAAAGATGTTGCTGGCCCTTCATCTTCAAGCGGTAGCTCTTTATCCTCGTCCAAGGATCACCAATCTGTTAGACAAGGTTCAGTTGGACGGAGTACAACTCCATCTTCTATTGCTTCGTCTTCAAGCAGAAGTAAAAGTACTACTCATAAACGGCCAGCTACGAGAGCTGCTCAAACGAAGAAAGATGATGAAACCACTCAGGATTTCGAAAGTGATGGTGGATCTGAACTGGATGAATCCAAAAGTCCAACTTCGGGTAAAAGAATTAAACTGGAATCTAGTTCATCATCTCCAGTCAAGAACAAGAGTCCTGAAACCCCACCAAAGGACGACGAGAATCCAGCAGATGCTGGAATAACAATAAAAGAGGAAAAAGAcgaacaaattgaaaatgatgatgttCATTCATTGTTACTTGAAAGTGAATGCCCTCCTGCTTCACCTAATGAAACTGCTGATGAAGGAGAAGGGTATAGTGTAAAAATCGTAGTGAAATCAGAGTATGGAGTTGACGAAGATGACAACCCTGTTATGGAtgaggaagaggaggaggaggaggatgaggaagaagaagacgaagaagatGTTAACGAAGGCTTTGAAGAAATTACAGTAGGACCTGTTATCAAACAAGAGTTCGTGCCCCCAGAAGCTAGATCCGAAGAACAATCTTCCAATAATGTGACTCCTACTGATTATGAGGCACCTTCAATCAAAGCAGAGGAAGAAGATGAGGAAGAGGAGTACGATGCAGAAGAAAGCAAGGGCCCTAGTGAAACTGAGAATTCTGATTGTGGTGAAGAAAGTGCTAATGAAGAAATCCATTTAGATAGTATCAAACCAGAAGtgaaaatagaagaagagtTCATCTGCAATGTTGATTCTAAGGAACCTAGCGATGAAGTTTCAAACGAAGTCAAAGAATTATCGGTTATTGTTACATCAAATGACACTGACACGGAAGATGTTTATGAATTCAAAGAACCTGAACCATTTGAATTCGAAGCTCGCAAAAGTTCGGATGACAAGGGGAAAACAACAAAGAGAGTGATCACTCTTTCAGTTGAAGACAAACCACCATCTCCCAAGATCAAGAGCAGTTTGTCACCTTCTGTTTCAGACTCAGTGCTGAAAATCCCATCATTTGAAGCTGCTGATCTTCTTAAAGATGACACTTCACCAGAAAGTACACCCACCATACAAACGTGTGAAGAAGCCTTTGACAAGATTTGTGCGTCTCCATTGAGAGCAGCTGCTCTTGATTCACGTCACATAGAAATGTTGGAAAGAGAGGGCTACGACAATTGTAGCAATGGTAGTTTTGACAAAGACAGTGAAATTCTTGCTGCTGAATACAGCAACTCTGCAACCGAAGTCAATGAACTAAAAGCTTCACCTCAGCATGAATCCCAAACGAAAGAGATATTCCCTAAAGACAACGACGGTGATGATGAAGAGGAATTAGAAGACGAAGCCATCAACAATGCCATTCAAACTGTCATGAACTTGGAAACCTCAGAGGACTCTTCTGATGAAGAGATGATCCCGATTGAAGACAATACCGTGTCTGTGACTGAAGTTGAATCAGTGAAGTTGGAAGAAAATGAGAGTAGTTCAGAAATGCAGGATCTGAAAAATTCGCCATcaattgatgaagaaaataagaTCGATGATAACTCTGGAACAGATGAAAGTCCCCCTCATCTAGTTGATGAAACTGAGAAAGATAGAATTGAGACGTCTGTCGAGCAGGAAGAAGACGCCCCGAAAGAAGGTAGTGAAGTGATTGACATATGCCCTGAAACAGTCTCAGCAGAGGAAAATATTCCTTTAAAAGAGGACGATGATGGAGCTATGATGGTCGATTTGGCGAGCAATGAAGTAGTGGATATTGAAGAAGATGAGAACAACATTGATTCTTTGATATGTGAAGAGACAATCCCTGGCAGCCCTCCATCTCACCTGGAAGCTCTTAACCAGaatgaagaaaaactcCAAACAGAAGACCAGGAACTGTTCAAAACAGATCGGGACCTAGCACCATCTGGCGCCACGAATGAACCAGATACATCTCAGCAAATTGTGCAAGTGGTTCGTGTTGAACATTCCCCAACAACGATCCATGAAAGTGATGCATCCTCTCCACCTTCCCCTCTCCAACGAGAACCAGAAGCAACTCCGTCACTTCCCGAAAAGAAAGCTGAAAAAGAAGTGGAGATCGACTCTGTTGGTTCAATTGAGTCGTCATCATACAAAAAGGACCCTCCTAAAGTATCTGCCACCGATTCTCGGCCAAAGAAGGTGGAAGTTAAAGCTCCAGCCAAGAGAGGAAGAAAGTCGAAGAAGAAGAACGACGAGTCCACCACTCGAAAAAAATATGCAAGACATTCGAAACACCAAGGAAGTGAAAGTGATGATGGCTACGATGGTGCAGGAGGGAGTGGTAGAGCTGAATCTTCCCGTTCTCGATCCCCTCATATGTATCACCTCAATTTTCTGATTCCGACTGataaaCTATCGGCCCTTGATGTCAGTCAGAAGATAGTCCAAATAAATCAAGCCATGCAAAATCTCCGTACTGCGTACAACAATCAGAAGACTGAACTTGCAGCTATTGACAAACGGCGCAAAAGAATTCGAAGAAGAGAAAGAGAAGACGCTGCCCGGCTCGTTAATGCCAGAAGTCATTAA
Protein Sequence
MYVSTFQADEPPSLPVGTGVSAKYKGAFCEAKIRKVVRSVKCKILFKNGLGSYTVGDDQIKGTIRTGAVVEARHPEKKEYSEATITKIQDGSQYTVVFDDGDITTLRRTALCLKSGKHFAESETLDQLPLTHPEHFSTPVIGGRRGRRTRIGISGASSDDDDSFRQSNDFSNFKETEIGRVVCVEGGEKRKNRDNWFPGLIVAPTAQESVPIRVRDEYLVRSFKDGRYYTVPKKEIMEFSREMGAKAETNSLKTAVEKALQFLDRDELPLHWDRDLLLYGVTDAGSDSDPGDDNESSDDEPREKKDHFVAQLYKFMDENGTPINEEPVIGSKDVDLFRLYKVVHNLGGFNRVTNQNNWKNISVKLGFGHNPVVVGMVKQSYRKYLLSFEEWPKRPGCSMQIQPRLSRSRYRVGKSNVVKENPSSSPVIKTEKDKVVEKSVQPVSEPVTPKGPVAKPVPPVPTKEPALIKPPVTPVVKEKPAAKKAAQQSTITPSQVKPAGEVFTKALVKDIKVEPGLKLRNPKFKPAESEVFFVKQEVKEPECSNPVPAIGETSIGPIRDKKKRMGSKEKPKKEVPLVKGGKVDCLANTRQKRVIKERLKTVADSIKGRSKASTSGLLEGVEKSHPAKSKVKDEGAATAKIKKEEVASVSAATEDKRKGRRKKEVKETKERTEMALINCDILPTYKTISLGDKLKVYYGPTKEAKITSYEAKVLNTKEENGETLYFVHYTGWNTRYDEWIRASRVADNLSWVAGKASKKQAQVTTPKSAKREKKSMKTENSKGDHKTSGNKDVAGPSSSSGSSLSSSKDHQSVRQGSVGRSTTPSSIASSSSRSKSTTHKRPATRAAQTKKDDETTQDFESDGGSELDESKSPTSGKRIKLESSSSSPVKNKSPETPPKDDENPADAGITIKEEKDEQIENDDVHSLLLESECPPASPNETADEGEGYSVKIVVKSEYGVDEDDNPVMDEEEEEEEDEEEEDEEDVNEGFEEITVGPVIKQEFVPPEARSEEQSSNNVTPTDYEAPSIKAEEEDEEEEYDAEESKGPSETENSDCGEESANEEIHLDSIKPEVKIEEEFICNVDSKEPSDEVSNEVKELSVIVTSNDTDTEDVYEFKEPEPFEFEARKSSDDKGKTTKRVITLSVEDKPPSPKIKSSLSPSVSDSVLKIPSFEAADLLKDDTSPESTPTIQTCEEAFDKICASPLRAAALDSRHIEMLEREGYDNCSNGSFDKDSEILAAEYSNSATEVNELKASPQHESQTKEIFPKDNDGDDEEELEDEAINNAIQTVMNLETSEDSSDEEMIPIEDNTVSVTEVESVKLEENESSSEMQDLKNSPSIDEENKIDDNSGTDESPPHLVDETEKDRIETSVEQEEDAPKEGSEVIDICPETVSAEENIPLKEDDDGAMMVDLASNEVVDIEEDENNIDSLICEETIPGSPPSHLEALNQNEEKLQTEDQELFKTDRDLAPSGATNEPDTSQQIVQVVRVEHSPTTIHESDASSPPSPLQREPEATPSLPEKKAEKEVEIDSVGSIESSSYKKDPPKVSATDSRPKKVEVKAPAKRGRKSKKKNDESTTRKKYARHSKHQGSESDDGYDGAGGSGRAESSRSRSPHMYHLNFLIPTDKLSALDVSQKIVQINQAMQNLRTAYNNQKTELAAIDKRRKRIRRREREDAARLVNARSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-