Basic Information

Gene Symbol
Kdm5
Assembly
GCA_031894815.1
Location
JAVIWC010007653.1:2117455-2120788[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-22 1.2e-18 68.5 0.1 3 88 86 167 84 168 0.93
2 2 1.1e-12 4.6e-09 37.8 0.0 5 88 203 274 201 275 0.89

Sequence Information

Coding Sequence
ATGGAAGTAGTTCCAGTTGAATGCTTCGAATTTCAACGACCGAATGAAGCACCGGTTTTTGAACCATCATCAGACGAATTCGATGACCCGATATCGTATATCACCAAAATCCGACCGATCGCTGAAAAATATGGCATTTGCCGGATCATTCCGCCGGAGGAATGGCGTCCACCATTCTccgttgatttgaaaaaattcacatttaatCCCAGAGTTCAACCCCTGAAAGAAATGGAAGCGACTACTAGAGTGAAACTAATGTTTTTGCAAGATCTGGCAGAATTCTGGGAACTTCAGGGTACGCCTTTGAAGATTCCTGTTGTAGAAAGGAAGGTACTTGATTTGTACGTTCTAGACCAATTGGTTAAAGAGGAAGGTGGCTTTGTGAAGACCACTGAATCGAGAAAATGGAGTTTTATTGCGACTACCATGGGTTTTCTCCCAGAAAGAGCGAACGGGCAAACCCTTAAATTACACTACGAGCGTTGGGTGTATCCTTATAATGTTATAATTAGTGCATCTTTCACGAAGGATCGGAAACGTAGAAAAACGCTTGGTGACTCGACGACAATGATGGCGAATGGAAGACATCCAGGGTGTATAGCGTTCAGTAAAAAACTGTGCGAGTTTTGGAGACTTAGAGGATCGCGCTTGAGTTGGCCACTTATTGACAAGAAGAGCGTTGATCTATTTGCGCTGCGAAATGCGGTAAAATATGCTGAAGGCGAAATTGATTGGAGCACCTTAGCGACAGACCTGCAGTTCACGGCAGGCGCCGGTGAAGAGCTCAAGAGTTTGTACTATAAAATTATAACACCTTTTTTGGAAGAGGGAGGTGAAGAGAACATGGAATCAGCAGACATATGTGAGAAATGCTTGACTAATAAGAACAGCCAGACTATGGTCGTTTGCTCACTGTGTGCGGCCTGTTACCACATGAATTGTTTGATTCCCGAGTTGCAACGGATTCCTAGGGGGCAGTGGAATTGTTATTCGTGCACCAaggaaaaactgaacaaacccaGAGAACCTTATGGATTCGACCAGGCTGAGAAACATTACACGCTGGAAGAGTTCGGTCAGATGGCAATACAGTTCAAGGAAGAACACTTTGGAATGCCAGCTCTTAATGTCCCACTAGAAGAGGTGGAGAGGGAGTATTGGAGGCTTCTTACGGATATTGAACACGACACAATGGTGGAGTACGGAGCAGATATTCACAGTGTCGACCATGGGATGGGGTTTCCAACTCGGAGTGATACAGAGTTGGATAAAATGGATATTGATGGGTACAGTAGATCAAAATGGAACCTTAATAACATCCCTGTAATCGAAACGTCAGTATACAGCCATATAGGTACAAACATCCCTGGTGTAACAATACCCTGGATGTATATTGGGATGTGCTTCTCAACTTTTTGCTGGCACATTGAAGACCACTGGAGTTACTCCATCAACTACCTTCATTGGGGGGAACCCAAAACCTGGTATGGAATCCCAGGGAAAGATGCAGAACGTTTTGaaacaatcttgaaaaaagTTGCTCCTGTTCTGTTCAGTGGCCAACCTGATTTGTTGCATGACTTGTCAACCACTGTGAACCCCAATACACTCATGGAATACGATCTTAAGATTTTCCGAACGGACCAAAAAGCTGGTGAATTTGTCGTAACATTTCCCAGAGCGTACCACGCAGGTTTTAACCAAGGTTTCAATTTTGCAGAAGCTGTTAATTTCGCACCTGCTGACTGGATCCCAATGGGACGAGCCTGTATTGACCATTATGCTAGTTTACTCCATGTTTGTGTTTTCTCCCATGATGAACTTATATGCAAACTTGCTCAAAAGGGCCAATTACTAGATAGAACCCTAGCAAAGGCGACATTCACAGATATGGTAGGAATGCTCAAATGGGAAAGTCAAAACAGGAAACTAGTAGTAAGTGCAGGAGTGAAAACATCTGAACGGGTGATCTTCGAAAAGATCCCAGACGACAACAGACAGTGTACACAATGCAAAACTACTTGTTTCCTTTCTGCAATCAAATGCCGTTGCCGAGAAGATTTATTATGtgtaaacgattttttaaaaataaaataccgctgTGGATGCCCTCCAtctaacttcattttcaaatacagaTATGACTTGGATGAGCTTCTAACGTTGATAACAAACGTCAAAGTTCACGCGGCCAATTGGAATTAA
Protein Sequence
MEVVPVECFEFQRPNEAPVFEPSSDEFDDPISYITKIRPIAEKYGICRIIPPEEWRPPFSVDLKKFTFNPRVQPLKEMEATTRVKLMFLQDLAEFWELQGTPLKIPVVERKVLDLYVLDQLVKEEGGFVKTTESRKWSFIATTMGFLPERANGQTLKLHYERWVYPYNVIISASFTKDRKRRKTLGDSTTMMANGRHPGCIAFSKKLCEFWRLRGSRLSWPLIDKKSVDLFALRNAVKYAEGEIDWSTLATDLQFTAGAGEELKSLYYKIITPFLEEGGEENMESADICEKCLTNKNSQTMVVCSLCAACYHMNCLIPELQRIPRGQWNCYSCTKEKLNKPREPYGFDQAEKHYTLEEFGQMAIQFKEEHFGMPALNVPLEEVEREYWRLLTDIEHDTMVEYGADIHSVDHGMGFPTRSDTELDKMDIDGYSRSKWNLNNIPVIETSVYSHIGTNIPGVTIPWMYIGMCFSTFCWHIEDHWSYSINYLHWGEPKTWYGIPGKDAERFETILKKVAPVLFSGQPDLLHDLSTTVNPNTLMEYDLKIFRTDQKAGEFVVTFPRAYHAGFNQGFNFAEAVNFAPADWIPMGRACIDHYASLLHVCVFSHDELICKLAQKGQLLDRTLAKATFTDMVGMLKWESQNRKLVVSAGVKTSERVIFEKIPDDNRQCTQCKTTCFLSAIKCRCREDLLCVNDFLKIKYRCGCPPSNFIFKYRYDLDELLTLITNVKVHAANWN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-