Clev007592.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- grn
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000269.1:411253-437556[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 1.5e+04 -3.4 0.5 7 17 7 17 6 18 0.78 2 2 8.9e-20 4.3e-16 59.1 4.7 1 35 271 304 271 305 0.98
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCACTAGGACGTGGTACGAGACGCCTAGATCGTTGGAGCCGCCTTCGGGGGGTGCCGGAGTGGCCGGAGTGGTCGGCAACGATTACAGGGGTTACTACCCTCATGCCGGGCCGACGCATCACCCCGCAGCTGCGGCCCACTACGCCCACACAAGGATGTCGAGCAGCGGCGTGTCGAGCGGTCCAGTGAGCCAAGTTTGCCGGCCGCACTTCCACAGCTCGGTTCTCCATCCGTGGTTGTCCGGCAGCAGCGCGGACACCTCGAAGACACCCTGGGGATTTCCCACGACGACGGCGACTACGGGCGGCTCTGTGAACGACGAGAAGCCACAGAGTCCTCTGGGATCCTCGCTGCCGCCCACCACTGGAAGTTTGTCGAGTCACGGTGGCGGCGGCCACCATCTCTTCTCCTTCCCGCCGACACCACCCAAGGACGCTACGCCCGATAGTATAACCGCCAGCACAACCTCGAGCTCGAACAATAACAACTCCACGAGCACCAATAATAACAACAGCGGTAATCCTCTTTCCGGGTTGGGCGGTGGTACCACCAGCGAGTACCAAGTAGCGGTCGCTCACGCGGCGGTAATGGGCGCGTTCATGCATCAGGACACGCTGGGCCCATCCGGCGCCAGCTCGTGCGACATCAAGCCGATGCTCGGCCATCATCATGGAGCGCCCTCGCCGCCGCATCAGCAACACAACGGTTCCAACAACGGCAGCAACGGTCCCGCCGGCACGAACGGCTCGTCCGCCGGCCAGGTGAAGCAGCGAGAAGAGGGTCGCGAGTGCGTGAATTGCGGCGCCACATCGACACCCCTCTGGAGACGAGACGGCACTGGCCACTACCTCTGCAACGCCTGCGGACTTTATTACAAGATGAACGGTCAGAATCGTCCCCTCATCAAGCCGAAACGACGCCTG
- Protein Sequence
- MDMSSESSTRTWYETPRSLEPPSGGAGVAGVVGNDYRGYYPHAGPTHHPAAAAHYAHTRMSSSGVSSGPVSQVCRPHFHSSVLHPWLSGSSADTSKTPWGFPTTTATTGGSVNDEKPQSPLGSSLPPTTGSLSSHGGGGHHLFSFPPTPPKDATPDSITASTTSSSNNNNSTSTNNNNSGNPLSGLGGGTTSEYQVAVAHAAVMGAFMHQDTLGPSGASSCDIKPMLGHHHGAPSPPHQQHNGSNNGSNGPAGTNGSSAGQVKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01269467;
- 90% Identity
- iTF_01269467;
- 80% Identity
- -