Basic Information

Insect: Crematogaster levior
Gene Symbol: -
Assembly: GCA_901521435.1
Location: CABEGB010000102.1:509340-516678[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.35 67 5.1 0.6 2 23 213 234 213 235 0.92

2 15 1.2 2.3e+02 3.4 3.3 1 23 241 263 241 263 0.97

3 15 0.00041 0.078 14.3 0.3 2 23 269 290 268 290 0.97

4 15 1.4 2.7e+02 3.2 8.8 2 21 571 590 570 593 0.94

5 15 1.4 2.6e+02 3.2 1.5 2 23 763 784 762 784 0.96

6 15 0.88 1.7e+02 3.9 0.1 3 23 799 819 797 819 0.97

7 15 0.0073 1.4 10.4 0.2 1 23 827 849 827 849 0.98

8 15 0.12 23 6.5 1.0 2 23 944 965 943 965 0.95

9 15 0.1 19 6.8 0.7 3 23 977 997 975 997 0.96

10 15 0.0024 0.45 11.9 0.2 1 23 1074 1096 1074 1096 0.98

11 15 0.027 5.1 8.6 0.3 1 23 1171 1193 1171 1193 0.97

12 15 2.1e-05 0.0039 18.4 0.7 1 23 1199 1221 1199 1221 0.97

13 15 0.004 0.75 11.2 2.6 1 23 1287 1309 1287 1309 0.97

14 15 0.00047 0.089 14.2 1.8 1 23 1315 1337 1315 1337 0.99

15 15 0.091 17 7.0 0.5 2 23 1429 1450 1428 1450 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.35	67	5.1	0.6	2	23	213	234	213	235	0.92
2	15	1.2	2.3e+02	3.4	3.3	1	23	241	263	241	263	0.97
3	15	0.00041	0.078	14.3	0.3	2	23	269	290	268	290	0.97
4	15	1.4	2.7e+02	3.2	8.8	2	21	571	590	570	593	0.94
5	15	1.4	2.6e+02	3.2	1.5	2	23	763	784	762	784	0.96
6	15	0.88	1.7e+02	3.9	0.1	3	23	799	819	797	819	0.97
7	15	0.0073	1.4	10.4	0.2	1	23	827	849	827	849	0.98
8	15	0.12	23	6.5	1.0	2	23	944	965	943	965	0.95
9	15	0.1	19	6.8	0.7	3	23	977	997	975	997	0.96
10	15	0.0024	0.45	11.9	0.2	1	23	1074	1096	1074	1096	0.98
11	15	0.027	5.1	8.6	0.3	1	23	1171	1193	1171	1193	0.97
12	15	2.1e-05	0.0039	18.4	0.7	1	23	1199	1221	1199	1221	0.97
13	15	0.004	0.75	11.2	2.6	1	23	1287	1309	1287	1309	0.97
14	15	0.00047	0.089	14.2	1.8	1	23	1315	1337	1315	1337	0.99
15	15	0.091	17	7.0	0.5	2	23	1429	1450	1428	1450	0.97

Sequence Information

Coding Sequence: ATGTTTCCTGCGGCGAGCAAGGGCGAGCGAAGAAGTCTGCGCGGAAGCGCGCGGCTCCCGTCCAAGATGTCGGGAAGGTTGCTCCGGTTGCGACCGCGGCCGCAGCAGCATCAGAGGCGCGCGAGGACGGAGGCGGTCGTCGACGTCGTCGACGCGACGACGTCCAAGCCGGAAGGTAACCTTAAAGGGGCCGCGGCGAGTCACGAGGTGGAGCACGATGCGAAGAGACACGACGCGAAGAAGGGCGAAGACACGGCAGGTGCTGTGAGCAAGGCGAGCGAGATGGACGAGGACGGCAACAACGACGATGACGAGCTGACGATGACCGCCGTCGACGTCGACGTCGTCGAAGacgaagaggaagaggaggaggaggaggaggaggaagaagaagaggaagaggaagcgATGCCGGATGGTAATGTTGACGTTGACGTGGACATCGACGTCGACGTCGATGTCGACGTCGCGGTGAATACCGAGGGGACGATCGACATCGACACGAACGAGCAAGCGTCTTACGAGTGCAAGAGCTGCGAGCCACCCGTCACGCTGTCCAGTATCAAGGCCTACTTTGAGCACCTGCGAAAGGAGCACAAATATAAGgGCAAAAACGGGCACAGTCCAGTTGAAAATCGTTGCCCTACGTGTTCGTATGTCGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGAGTGCATCATTTGAAAAGAAAGTTCTTTCAATGCGCAAAATGCGATTACGTGACGCACCTCAGAGCGCGTTATACTAAGCATGTTAAATATCATTCTCTGCCGATGATCAAGTGCGAAGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGAAAGACACATGCGGAATCATGGAGGTGGAGGTGCTTTCAAATGTCGTGCATGTAATTTTACTGCTGATATCCGTCAGAGCTTAACGGTGCATGAGTCGTATCATCATGACCCACCTGTGGGTCAGGTCAACCGCGAAAGGAATAACTATTTCGAACGTAAGCCACGAAATACTCCAAAACGTTATAATCAGGTTGGAGCCAGTGACTTTCGAGAAGCgttaaataaaaacgaaaGTACAATCACGTCGGCCGGTTCGTCTGATTCGTTCGTATCAGATCATTCGATTTCGATAGATGATAAGAAAAGCGCCCTGGCCAGTGCGGAGTGCATCGCGTTAAAGTGCGAAGAGAAAGGCTGCCAATTTATAACTGCCTGGGATTCCGAGATGCAACGTCATTTAGCAGAATGTCACGCGCCGGTTATTCCATTAAAACCAAGAAAACCACTGCCGATGTTGATTCCATTAAGTCTAGCGAGCTCTAAGCCCAATAACACGCTCAGTAATAGTGGGCCACCTACGACCCTGTTGAAGGTTCCGCGCGTTAGAGTGAGGCCCGAACTGGCGCAAATCGCGAGAGATACGGAGCTGGCAAAGATGTACGGGAACAAGGAGGCCGCGAATTCGAAGAGGAATACCGCGGCTGGTGTATTTGAGAGAAAGAATGCTTCCTTCTTCGATAAACTGAAGGAAAAACTAACGACGACAGCGACGTCGATTAATAACGGTGTGCCGGAGGTAGCTGTAAGTAGTGAGAACAACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTAGCTTGCCACAAACAGACACACCACACCGCGCTCAGCGTATCCGTGGGCACGACACGTTGCCCTAAGTGTAGAAGACGTTGCAAGAGTACGACCGATCTCCAAACGCATATACAATGCTGCCATTCGCGCAACGACACAACGCCGTCCATCGATAGTAGTTTAGAGAAAGTAATGAATCGTTCAGATGTCCGCATGACCTCGTACCGTGATGAATACTCTTTTCCGTCGCAAATGGATTGGGACGCGAATCTCAGAGGACTAAATTCTTCTGGATCTTCGGTAGAACAGCAATCGTGGGATGAGGATCGTATGGAGCAGCGTAGCATAGAGGAAACAAACTCTGAAGAATCGTCAACGAAGCTGTTGATCGTGGGTAATAAAGAGTACGTTTCGATGACTGGTCCGGCATCGCAATCTCCTGTCACGATTGTACCGTCGAGCGAGGCAAATCAGAATAGTCATAGCATAGATGTGAGCCTACGACCTCCGCCACCACTCAAAGCAGCGGTCAGAAGTCGCGGGCAGTCTCTGTTAAAGAACAGTCCTATCACAATGCATATTACCACTCCTAGTGGTGGTGGTGCGGTCTCCATATCCCCAGCGATAGATGAGAGTAAACGTACTCAGTGGAAGTGCAAACGTTGTAAATATCGAGATACCAACAAAGATAACGTGTTGTTGCATGTTAAATCTCACTACGGATCTACCGAGTCCATCGAAGAAAGGaATCCATTTGGTTGTGGAGATTGTCCATTTTCAGCGTCGGATGTTGCCACTCTGTCTCTTCACAGGATGAACCATCGGCCGAACTTAGAAGCTATATTTAAATGCTATCTTTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGAGCACGCTAGGCTCCACGGGGAAGAGCTGGCAGCTATGCATCAGCAAAATATAGATTTCCAACTTCCAAATTCCAAGAATCAACTGCAACAAGTATCAATTTCTGAAAGTGATGTTTCTCGAACGAAGGACGAATCGTCCATAGAACAAGTGATTCAAATAACGTCACGCAACAATGTAACGACATCTTCAAAGGCACCACCACCTCCACCACCGTCACTTCTTTTAGACACCCGTGCCCTTCCAGATGCTCCGCTAGTTTGGGTATCGCGACTAGATGGCACCCTGACGAAAATGCTCAAGTGTCGTCATTGTCCGTACATCTCATCACGACGTGCAGAAGTGCGCGATCATGAAACAATGCATGTAGATGTGCCAACTCATGGTCCCCTGATCGCCTGTACGGACTGTAGTTTTACTTGCTCGCGTCGAGAAGTCATGATTGCGCATACAGAAATGCATGCCGGATCTCTCGGCACTGTTCACTGCCTTGTCGACGAAACGCGACCTGATTCTCAACAGGTGAGCGATCTGGCCACTCTGCTTGGATTGGCGCATACTCCTGTGCTGGGCACTGAGCCCGATCTACAGGATTCGCGTCTGGTACATTGCTGTGGCAAGTGCCCAGCACGGTTTCTGTGCGAGAAAGAATTGCGTATTCACCTGCGTTACCATACCACGGAACTGGCATATTCATGTCAATGGTGCTCGTATGCAGCGCGACAACCGGCGCATCTGTTGGCTCATCAAAAGGCGCACTCGACGGAGTATCAGGAACGCACCAAGTATCTGTTGTCCTTGTATGGTCACTCGCAACGTTATCCACCGCCCACAACAGCGTGCGTTGAGGCGGAAAATCGTGAAGACAATGACACGCCGAATGTCGCATGGATTGTCGTTGAGATCAATGAGAACACGAATAACTCTTATAACAATGCTAATAGCACTACGACAACCGTTCAGAGGCCTGGCAACCAGGTATTTACATGTGCTAAGTGTCCAGCTCGTTACTTCAAACTGGATGCTTTGGAATATCATATGACGCTTCATGGTTCAAACAATCGGTTCAAGTGTAATGACTGCGATTATTCATCGAAAACGGCACAAAATCTGTTAAAACATCAAGTGGTACATCGACGACATGGTGAAACCAGCCAAGTGACTGCGGAGCTGTCGTCTACCACCGTCACCGCTGACTCTGCTCCGACGTCCTCTCCTGAATCACCACTGCAGTCACCACCGGATCCACAATTCGGTATCTTCATGCGCGGCAATCCCAACTTTGTTTATCCAGGTTACTTAAGAAACGGCCGTCTGAAGGAAAAGCGCTACAAGTGTCACAAATGTCCGTCCGCTTTTGAAAAGCGTGAACAATATAGGGTTCATCTTACCTTACACGGTGCAAAACAACGCTATCGCTGTGATACGTGCGACTATTCGGTCAAATACTATGCGAATTTTATACAGCATTTGAAGAAACATCAAGCGAACGCAGAAGCGCAGGCATCTCGTAGACAATTCGAGGATGATCGGATCTCAGTCGATAGCGACAGCATCACTGACATCATTGCATCAGCATCGTCGCGCAAGTCTTCGCGATCATCTGCCAGTATGCTCACAGTGTCTTCCAACAACTCATCTAATATTAGTAACAATCCTGCGCTACAACCCTCCAATCAAGATAGGCAGAGTTTACTGCTGATGCAAAAGAAGGGCATTATTTCGTCAACGGGCGAGACTGACGCGGAAACAATCCGCTGTCAGAATTGTCCATTTTCTACCAGTGACAAGGACGTCATGGATGCGCACAAGCGTCGCCATGGCATCGAGCGTATGACACCGCCGTGCCCACATTGCGACTACATTCCGCGGAAAGACGAGAATGTCGGTGAGCACATCAAGCTACACTTCACGAGACTGTACAAGCCCGAGTCCTATCTCATCGTTGAGTTACTGACGCTGACGATGGAGAAGATATCTGCGAATAGCAAGGATGAAAAGGGTCAGCGGTTGAAAGAACTATTGTTTAAGGAATGTACCGACGGTAGATTCCTGCCGCTCACCGAATCGATcaactctctttctctagGTACCTCGTCTTCGACAATGAAGGCTGTCAAGAAGGTCATCGTAGATCCAAACACAGGCGAGACCAAACATCATCGTCTTGCTACGTAA
Protein Sequence: MFPAASKGERRSLRGSARLPSKMSGRLLRLRPRPQQHQRRARTEAVVDVVDATTSKPEGNLKGAAASHEVEHDAKRHDAKKGEDTAGAVSKASEMDEDGNNDDDELTMTAVDVDVVEDEEEEEEEEEEEEEEEEEAMPDGNVDVDVDIDVDVDVDVAVNTEGTIDIDTNEQASYECKSCEPPVTLSSIKAYFEHLRKEHKYKGKNGHSPVENRCPTCSYVALNVKDLENHQRVHHLKRKFFQCAKCDYVTHLRARYTKHVKYHSLPMIKCEACDFSSAYKWNLERHMRNHGGGGAFKCRACNFTADIRQSLTVHESYHHDPPVGQVNRERNNYFERKPRNTPKRYNQVGASDFREALNKNESTITSAGSSDSFVSDHSISIDDKKSALASAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVIPLKPRKPLPMLIPLSLASSKPNNTLSNSGPPTTLLKVPRVRVRPELAQIARDTELAKMYGNKEAANSKRNTAAGVFERKNASFFDKLKEKLTTTATSINNGVPEVAVSSENNLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKSTTDLQTHIQCCHSRNDTTPSIDSSLEKVMNRSDVRMTSYRDEYSFPSQMDWDANLRGLNSSGSSVEQQSWDEDRMEQRSIEETNSEESSTKLLIVGNKEYVSMTGPASQSPVTIVPSSEANQNSHSIDVSLRPPPPLKAAVRSRGQSLLKNSPITMHITTPSGGGAVSISPAIDESKRTQWKCKRCKYRDTNKDNVLLHVKSHYGSTESIEERNPFGCGDCPFSASDVATLSLHRMNHRPNLEAIFKCYLCPYYVSTKAELLEHARLHGEELAAMHQQNIDFQLPNSKNQLQQVSISESDVSRTKDESSIEQVIQITSRNNVTTSSKAPPPPPPSLLLDTRALPDAPLVWVSRLDGTLTKMLKCRHCPYISSRRAEVRDHETMHVDVPTHGPLIACTDCSFTCSRREVMIAHTEMHAGSLGTVHCLVDETRPDSQQVSDLATLLGLAHTPVLGTEPDLQDSRLVHCCGKCPARFLCEKELRIHLRYHTTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPTTACVEAENREDNDTPNVAWIVVEINENTNNSYNNANSTTTTVQRPGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLLKHQVVHRRHGETSQVTAELSSTTVTADSAPTSSPESPLQSPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANFIQHLKKHQANAEAQASRRQFEDDRISVDSDSITDIIASASSRKSSRSSASMLTVSSNNSSNISNNPALQPSNQDRQSLLLMQKKGIISSTGETDAETIRCQNCPFSTSDKDVMDAHKRRHGIERMTPPCPHCDYIPRKDENVGEHIKLHFTRLYKPESYLIVELLTLTMEKISANSKDEKGQRLKELLFKECTDGRFLPLTESINSLSLGTSSSTMKAVKKVIVDPNTGETKHHRLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: -
80% Identity: -