Basic Information

Insect: Crematogaster levior
Gene Symbol: -
Assembly: GCA_901521435.1
Location: CABEGB010000636.1:724175-727211[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0037 0.69 11.4 2.8 2 23 211 232 210 232 0.95

2 11 0.001 0.19 13.1 2.6 3 23 237 258 236 258 0.95

3 11 3.5e-05 0.0066 17.7 1.1 3 23 269 289 267 289 0.95

4 11 0.035 6.5 8.3 1.5 1 23 323 345 323 345 0.98

5 11 0.019 3.7 9.1 3.3 1 23 348 371 348 371 0.90

6 11 0.0044 0.84 11.1 1.8 1 22 385 406 385 409 0.90

7 11 0.00049 0.093 14.1 0.3 1 23 423 446 423 446 0.97

8 11 0.31 59 5.3 2.0 1 23 452 476 452 476 0.95

9 11 0.00037 0.069 14.5 0.3 2 23 483 505 482 505 0.91

10 11 7.8e-08 1.5e-05 26.1 1.0 1 23 511 533 511 533 0.97

11 11 0.00027 0.051 14.9 6.3 1 23 539 562 539 562 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0037	0.69	11.4	2.8	2	23	211	232	210	232	0.95
2	11	0.001	0.19	13.1	2.6	3	23	237	258	236	258	0.95
3	11	3.5e-05	0.0066	17.7	1.1	3	23	269	289	267	289	0.95
4	11	0.035	6.5	8.3	1.5	1	23	323	345	323	345	0.98
5	11	0.019	3.7	9.1	3.3	1	23	348	371	348	371	0.90
6	11	0.0044	0.84	11.1	1.8	1	22	385	406	385	409	0.90
7	11	0.00049	0.093	14.1	0.3	1	23	423	446	423	446	0.97
8	11	0.31	59	5.3	2.0	1	23	452	476	452	476	0.95
9	11	0.00037	0.069	14.5	0.3	2	23	483	505	482	505	0.91
10	11	7.8e-08	1.5e-05	26.1	1.0	1	23	511	533	511	533	0.97
11	11	0.00027	0.051	14.9	6.3	1	23	539	562	539	562	0.94

Sequence Information

Coding Sequence: ATGATGACGCTACGTTTGTTTGATAGCCAGGATTATTCGACAGTGGATGCTATGCCGAACATGTGCACGGAAAATGGCACGGAGAATGAGCTGGAGAGCTATAATTATCTGAGAGAGTGCATGGACAACCTTGAAAGTAAGAATTCTGGTCTGGCAGCCGCTCCCATACATGTCACAGACATTGGTTTACAGGGAGATGATTTGGACGATGTTAATTTGAATAGCAttgattttatgaaaatcgaaAGCCTGCTTCTGCAAAATGCTGAGGAATCCGCAATGAGCAAGGAGGAAAAGACGAAAGATAGATCAACGGATGTCTCACACTCGATTCGACATTTCAACACGATGAGTCTGAACTTTTCGAGCTTTTCTAATTGTTCGAGCAAAGAATCAAGTGACGCAACCGTTAATAATGAGTCTTATGCATTTGGTAAAGATCATTgtttggaaagaaaaaaaatagaaaactacGATTGTTCTGTCAAACCTTATATAGGaaataatatagatacaaattcTAATATCAATAAAGATAACGATTGTATAAATGAAAGTGTCACATCCGAGTTGAAACGtgagataaaaattgataatctaGAGTTGTCGAATGGAAACGAACAGATACAGAAGTGTGAGCAATGTTTAATGACATTCAGATATAAAAGACATTTGGATCGTCACTTGGAAGGTcatcagaaaaataattgttctcGTTGTAACGAAAAATTTGCTAGACGAAAGCATTTAGAGGTTCACTTGTTTCGTGCACACGGGGAGAGAGTGGTCAGGCATCCTCACTTATGCGACGTATGTCCGAAAAGTTTTCCTAAACGCGCCCTTCTGAATCGTCACAGAGCGAAGCACAGCTATCAAAGCGGTAAAGTGTGTTCGGAATGCGGAGATATGATAAACGCGGACACAGATGAGAAGGAGCACGAGGAGAATCACTGCAAGAAGAGGCAATTTAAGTGCCAGCAATGTTTGCAAACGTTCAGCATTGAGCAGACATATCTATCTCACATTCAGAATCATGATAATTATCAGTGTTCACACTGTGATGTTACCTTCGCGTCGAAGAGGAAGGCACACGAACACTTTAAGGCAGTTCACATCCCAAAATTAAACGAGCAGGAATCAACAAATGgtCCATATTTTTGTGCTGATTGTAGACACACGTTCGTAAAGAGAGATGACTATTTTCGACACTTGGAGTCTGCGTTACATCTTAGTAAAGTCAACAGGGATATACCTATAAGGGCTATATTTTCTTGTGCAATCtgttcgaaaaaattaataacacaaaGAGCTCTGGATCAGCACATTAGACGCATTCATAAGGGTGCAAAGCGATTCGCTTGTAATATATACGGGTGTACGTTTCAGTGTGCCAGAAGAACGGATCTAGATAGACATAAACAACTGCATGTAGAAGAGCGAAATATCGTATGCGAGCATTGCGGCAAGACATTTACCAGTGTCAGCATTCTAAAGGATCATGTACTTTATATTCATAGTAAGGAGCGACAATTCATCTGCGAAGAATGTGGCAAAGCATTTAAGAGAAACAGTTTATTGAAAAGACATAAACTGTCGCACGAACAGCATCGGCCGTTTGTCTGTATGCAATGTAGCACCGCATTCAAACGTTCGCATCATCTCACTCGTCACATGGAAGCTTGTCACAGAATTACactggaaaaaaagaaaaagGTGGTAAAACTTATGAAAACAAAAGATGGTCTTCTTGTGCCAGTGCCAGATAAGTTAAACAGATCAGaagctaataaaataaaaactggaAAGGGACGGGAATCAGTTTCAAAGAATAAAGAGACAGATTGTTCAGTCacaaatgtaaagaaacaggCTGTAAATGTTAATTCGCAACTACAATTGTTAAATCCTGAGGAAAATCCCAAATGTCCTAACTTGTCGTCAGAACTTACAAATTCATCTGTCGTCGAATCTATCCCACAAGTTCTTTCATTAGTAGATGTAAATACGGGACAAGTGCTTACTGTAGAAATCACTAATAATTTGGAATTGTTACCTACTAATGAACTAGTTGATCAGTTTGGGTCAAATTGCaatgaaatattgaatttaccAGATTATCAAGATATAGAATTTCAAAGTAATCTTTTGAACACTGATCAAATGTATTATgacaatacaaattattcggAGATATCGTTGGAAAATATTGAAGGCTCGTTTCCgcttgtaaataataatagtaaaatggAAACGATAGAAAACTATTTAACTCATGAATTTCCatcatttcttaatatttga
Protein Sequence: MMTLRLFDSQDYSTVDAMPNMCTENGTENELESYNYLRECMDNLESKNSGLAAAPIHVTDIGLQGDDLDDVNLNSIDFMKIESLLLQNAEESAMSKEEKTKDRSTDVSHSIRHFNTMSLNFSSFSNCSSKESSDATVNNESYAFGKDHCLERKKIENYDCSVKPYIGNNIDTNSNINKDNDCINESVTSELKREIKIDNLELSNGNEQIQKCEQCLMTFRYKRHLDRHLEGHQKNNCSRCNEKFARRKHLEVHLFRAHGERVVRHPHLCDVCPKSFPKRALLNRHRAKHSYQSGKVCSECGDMINADTDEKEHEENHCKKRQFKCQQCLQTFSIEQTYLSHIQNHDNYQCSHCDVTFASKRKAHEHFKAVHIPKLNEQESTNGPYFCADCRHTFVKRDDYFRHLESALHLSKVNRDIPIRAIFSCAICSKKLITQRALDQHIRRIHKGAKRFACNIYGCTFQCARRTDLDRHKQLHVEERNIVCEHCGKTFTSVSILKDHVLYIHSKERQFICEECGKAFKRNSLLKRHKLSHEQHRPFVCMQCSTAFKRSHHLTRHMEACHRITLEKKKKVVKLMKTKDGLLVPVPDKLNRSEANKIKTGKGRESVSKNKETDCSVTNVKKQAVNVNSQLQLLNPEENPKCPNLSSELTNSSVVESIPQVLSLVDVNTGQVLTVEITNNLELLPTNELVDQFGSNCNEILNLPDYQDIEFQSNLLNTDQMYYDNTNYSEISLENIEGSFPLVNNNSKMETIENYLTHEFPSFLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00126217;
90% Identity: -
80% Identity: -