Basic Information

Insect: Crematogaster levior
Gene Symbol: ham
Assembly: GCA_901521435.1
Location: CABEGB010000947.1:306760-343638[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0085 1.6 10.2 0.7 2 23 311 333 310 333 0.95

2 9 0.47 89 4.7 0.1 1 23 340 363 340 363 0.93

3 9 1e-05 0.002 19.4 1.2 1 23 369 396 369 397 0.93

4 9 4e-06 0.00076 20.7 2.6 1 23 403 425 403 425 0.95

5 9 2.5e-05 0.0047 18.2 5.0 1 23 431 453 431 453 0.99

6 9 0.00019 0.037 15.4 0.7 2 21 461 480 460 481 0.95

7 9 5.8e-09 1.1e-06 29.6 1.2 1 23 838 860 838 860 0.99

8 9 3e-07 5.7e-05 24.2 1.7 1 23 866 889 866 889 0.97

9 9 8.6e-06 0.0016 19.6 3.4 1 23 895 917 895 917 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0085	1.6	10.2	0.7	2	23	311	333	310	333	0.95
2	9	0.47	89	4.7	0.1	1	23	340	363	340	363	0.93
3	9	1e-05	0.002	19.4	1.2	1	23	369	396	369	397	0.93
4	9	4e-06	0.00076	20.7	2.6	1	23	403	425	403	425	0.95
5	9	2.5e-05	0.0047	18.2	5.0	1	23	431	453	431	453	0.99
6	9	0.00019	0.037	15.4	0.7	2	21	461	480	460	481	0.95
7	9	5.8e-09	1.1e-06	29.6	1.2	1	23	838	860	838	860	0.99
8	9	3e-07	5.7e-05	24.2	1.7	1	23	866	889	866	889	0.97
9	9	8.6e-06	0.0016	19.6	3.4	1	23	895	917	895	917	0.99

Sequence Information

Coding Sequence: ATGAATGGCCTTGATCTGTCCCGGTCCGTGGATTACAAGATGAACGGAAGCAGCGACGAAGGCGAGTCGACATCGGGTGCGACCGGCGGGGGTGGCGGTAGCGAGAACGCAGAAATGGAGGAAAGTGGATCGACTCGCACGAGTAGCAACAGCAGCGGCAACAATCCCGTTTACAGAGACCTGAAGCTACTACAAACCGGAGGTGAAGTTCCGCCGGAGTACAGCCCGCAGGAGTACAAGCGGACCGCTTATCAGCAGCGCGGATACTCGCCGGGGATGGACCGACCGCGGAATTACGATAAGGAGCAACTTCAACCGTCGCCGTCTTCtagggaggaagagagaaagtcATCCTGGGACTACGAGAAAAACACGCGGAAAGAGTACTCAAGGTCGCGGGATTACAATGAATACCAGGATACGATAAAGCAGGAGCCCAAGGATCACTCGAGTCGCGAATGGGTGTCACCCGTCCCGGAGGTCGAGGTCGGCGGCTCGGCACCCGGAGGCCCGTACGTTCGTGCACGCAAAGACATCCCTCGTGGCGCGAGATTCGGTCCGTTCCTCGGCAAATGGGCGAGCGAGCCTTTCAACCCCCGTTACGCGTGGGAGATCCGCATAGCTGGCAGTGGAGTAAGAGGCTGGTTGGATGCATCTCACGAGACGAACAATTGGCTAAAGTATATTCGAAGTACTGCCAGTTCACACGCAGTGAACATGCGCCACGTACTCATCGGCGGTCAGATGGTGTATGAGGCTGTTCGCGACATTACAACGGGCGAAGAGCTCCTTTTGGGCCTCCGGGAGCCGCTTCAGCTGCAGGACATGCTGGGTGAGAATACGACCGAAGACAGAAGCGATCGAGAAACTGCTTCTCAGCACAGTGGAACTGTCGATGAGGATAAGGAAGAcgaagaagaaggagaaacGAGGTGCACTGTCTGCGACAAACCGTTTCAAGATATCGAACTgTTGGATAGCCACCTGGTAACCTGTCACAGATACCCAGCGGAACAGCACCGTTGTGACAGCTGTCCCCGTGCTTATGCCTGGCGACCACTTCTGGTACGACATCGTGCTATCGTTCACGGTGATCTTAGAAACTATCCCTGCGAAAATTGTCCGAAGTCGAACATCCGGCAGGTCTTCACGGACCCATCAAACCTACAACGCCATATCAGAACGCATCACGTGGGCGCGAGGAGCCACGCTTGCACGGAATGCGGCAAGACCTTCGCGACCAGTTCCGGCCTGAAACAGCACACCCACATTCACAGTAGCGTGAAACCCTTCCAGTGCGAGGTCTGTTTTAAGGCGTACACGCAGTTCTCCAATTTATGCCGGCACAAGCGCATGCACGCCGACTGTCGCATGCAGATCAAGTGTGTTAAATGCGGAACGTCCTTCAGCACGGTAACATCGTTAACGAAACATAAGCGATTTTGCGACTCCTCGACTCCGACTGGTCCGCCTGGAACCATGCCTCAATTACCGACGCCAGCGACGAGCCCCTTTCTAGTGTATCCACGACCTCCCGTGAGCCTACCAGGCGGTTTGCCTTTTTACCCGCCTAGTCTGATGGGTCCTTATCCGGGAATTTTCCCAAATGCTCCGAACTTTCTCAACACTCCTTTGCTATTCCCGCCGAAAATCGAAGAAGCCGAGAAGAGAAGCGACAGCCCCAAGAAGGAACGTTTTACTCCTCCGAGAGTATCGTCACACCACAATAAGGTCTCTCCTTCTACGGCGGAGGAAGCCACTTCTATGTTTAGGCCATCTCCGGCTAGACCTCCTGTTCAACCGACGCCAGAGAGCGATGACGATCTTTCAAAGAGAAGAGAAGCGGCCAGAAGCAACGAGcgaaaaatggaaatcgaaagCACTTCGAAGGAAGAGATGACCGAACAACCATTGGATCTAAGGGTGCAGACTAAGAAGCAGGATGCTATTTCGAAAGCCGTAGACAGGAAAAGCCGCACTCCGTCGCCAGCCCCAGTACCGATGGAGGAAACGCCCGCACCTCCTGATCCTCCGAAAGCGGAAGAGGATGCTGCCGCTCTACCGCCGATGGAGCTCGAGTCTAAGGATATCCAAGGAAATAGCCCGCACTTGAGGACCAGTCTGTCAATCGAACAACCGCCGACCACTACACCGCCCCACATGGCTTATCCCAGACCGATACACCCGATGTTCCTTGAAACGATGTATCGCGGTCCAACGGGAACCTTTCCAGGATTTCCTAGCGCACCACCACCTCCAGGAGGAGCTACCCCGGAATCTAGGCTGATACCTCCACTTCCACCCTTTGCTCCACCACGCGGGCTTCCTTTTTTAGGCTCGCTCATGAATGGGCTCAGCGGCGCTAGGCCAGGAGGGGGATTCGATCTGCTTGCCCGGCCGCCATTGAGTGCGTTCCCTGGTGTAAAACCGTTTCAAGAAGCCGTAATGGCGCCTCATCATCACCACCACCATCACCATCATCATCACGTCCACGGCAAGATGAAGGATCGGTACTCCTGTAAATTTTGCGGCAAAGTGTTCCCTCGCTCGGCCAATCTAACGAGGCATCTGAGAACTCACACCGGCGAGCAGCCGTACAAGTGTAAGTACTGCGAGAGATCCTTCAGTATCTCAAGCAACCTGCAGAGACACGTTAGGAATATTCACGACAAGCAGCGGCCGTTCAAGTGCCCGCTTTGCGAGAGGTGCTTCGGGCAGCAGACCAATCTGGACAGACATCTGAAGAAGCACGAGGCTGACGACGGTAGCGGAGTGGTATCGGTCGCCGATTCGCCAGGAAGCAGCAACGAGAACGAGCGGGAGGACACCTACTTCGACGAAATCAGGTCCTTCATGGGCAAGGTCACTTACGGCGGCGAGAGCGGCTACGGGTTGCCGCATCACCCGGCCTATATTCCCAGTCGTCTGCACGAGATAAACGAGACCAAGATGGAGGTCGAGTATGACGAGGACGAGGACAGCGAGGAGGGTGTGTCTCCTTTGGAGGAGACGGACGGACTGTCGCCGATCGAGGCCAAGGAATCCCCGTCGCCCTCGCAGTACGACCTGAAGCTGAGGGAGAAGCAGGAGCTGCTCAATAATAACACCGCGGAACCGGTGATCGAGATTTCGACATAG
Protein Sequence: MNGLDLSRSVDYKMNGSSDEGESTSGATGGGGGSENAEMEESGSTRTSSNSSGNNPVYRDLKLLQTGGEVPPEYSPQEYKRTAYQQRGYSPGMDRPRNYDKEQLQPSPSSREEERKSSWDYEKNTRKEYSRSRDYNEYQDTIKQEPKDHSSREWVSPVPEVEVGGSAPGGPYVRARKDIPRGARFGPFLGKWASEPFNPRYAWEIRIAGSGVRGWLDASHETNNWLKYIRSTASSHAVNMRHVLIGGQMVYEAVRDITTGEELLLGLREPLQLQDMLGENTTEDRSDRETASQHSGTVDEDKEDEEEGETRCTVCDKPFQDIELLDSHLVTCHRYPAEQHRCDSCPRAYAWRPLLVRHRAIVHGDLRNYPCENCPKSNIRQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGTSFSTVTSLTKHKRFCDSSTPTGPPGTMPQLPTPATSPFLVYPRPPVSLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLLFPPKIEEAEKRSDSPKKERFTPPRVSSHHNKVSPSTAEEATSMFRPSPARPPVQPTPESDDDLSKRREAARSNERKMEIESTSKEEMTEQPLDLRVQTKKQDAISKAVDRKSRTPSPAPVPMEETPAPPDPPKAEEDAAALPPMELESKDIQGNSPHLRTSLSIEQPPTTTPPHMAYPRPIHPMFLETMYRGPTGTFPGFPSAPPPPGGATPESRLIPPLPPFAPPRGLPFLGSLMNGLSGARPGGGFDLLARPPLSAFPGVKPFQEAVMAPHHHHHHHHHHHVHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGESGYGLPHHPAYIPSRLHEINETKMEVEYDEDEDSEEGVSPLEETDGLSPIEAKESPSPSQYDLKLREKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01407591;
90% Identity: iTF_01261975;
80% Identity: -