Basic Information

Insect: Crematogaster levior
Gene Symbol: -
Assembly: GCA_901521435.1
Location: CABEGB010001075.1:15786-20941[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0031 0.59 11.6 2.6 2 23 105 126 104 126 0.97

2 15 6.3e-05 0.012 16.9 2.4 1 23 128 151 128 151 0.96

3 15 0.0004 0.076 14.4 1.5 1 23 156 179 156 179 0.97

4 15 0.00013 0.025 15.9 2.1 1 23 185 208 185 208 0.95

5 15 0.0007 0.13 13.6 2.0 2 23 215 237 214 237 0.95

6 15 0.00035 0.066 14.6 0.3 1 23 242 264 242 264 0.97

7 15 6.6e-06 0.0013 20.0 0.5 2 23 366 387 365 387 0.95

8 15 0.0091 1.7 10.1 3.7 1 23 389 412 389 412 0.97

9 15 0.046 8.7 7.9 3.5 1 23 417 440 417 440 0.95

10 15 0.00015 0.028 15.8 3.2 1 23 446 469 446 469 0.95

11 15 0.0097 1.8 10.0 0.8 3 23 477 498 475 498 0.95

12 15 0.0001 0.019 16.3 0.2 1 23 503 525 503 525 0.97

13 15 3.5e-06 0.00066 20.9 0.1 2 23 532 553 531 553 0.97

14 15 2.6e-06 0.0005 21.3 0.1 1 23 559 581 559 581 0.98

15 15 0.0013 0.24 12.8 2.1 1 23 587 609 587 609 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0031	0.59	11.6	2.6	2	23	105	126	104	126	0.97
2	15	6.3e-05	0.012	16.9	2.4	1	23	128	151	128	151	0.96
3	15	0.0004	0.076	14.4	1.5	1	23	156	179	156	179	0.97
4	15	0.00013	0.025	15.9	2.1	1	23	185	208	185	208	0.95
5	15	0.0007	0.13	13.6	2.0	2	23	215	237	214	237	0.95
6	15	0.00035	0.066	14.6	0.3	1	23	242	264	242	264	0.97
7	15	6.6e-06	0.0013	20.0	0.5	2	23	366	387	365	387	0.95
8	15	0.0091	1.7	10.1	3.7	1	23	389	412	389	412	0.97
9	15	0.046	8.7	7.9	3.5	1	23	417	440	417	440	0.95
10	15	0.00015	0.028	15.8	3.2	1	23	446	469	446	469	0.95
11	15	0.0097	1.8	10.0	0.8	3	23	477	498	475	498	0.95
12	15	0.0001	0.019	16.3	0.2	1	23	503	525	503	525	0.97
13	15	3.5e-06	0.00066	20.9	0.1	2	23	532	553	531	553	0.97
14	15	2.6e-06	0.0005	21.3	0.1	1	23	559	581	559	581	0.98
15	15	0.0013	0.24	12.8	2.1	1	23	587	609	587	609	0.97

Sequence Information

Coding Sequence: ATGGCAATAAAAGCATccaaatgtttattaaaccGCCTCCATAGTTATTGTAATCCCTTCCAGCTACCTCCTCCTCGTCTTTATCAAACTTTCGATGACTTTACTCGCAACAgaGTGGATCCGTTGAACGTTGAATCTAATGTTCAGAAACCATTCATCAGAATCGAATGCGAATGGACGAAGAGAGAAAAGTCGTTAATGGAACGTACGAGTAAAAGACCGGAAAAGATAAGTGCGAACCTAACGAGAGAGGAGCTTGTTCCGCGGATCGGAACTGAAGAGAACCGACCGACTAGAAAGAAGACCTGCGTAGAGTGCGATCATTGTCGTCGTAAGTTCTTGAAGAAGAGCAACCTCGCCGAGCATTTGAAACAGCATAGGCACAAATGCACCGACTGCCCGAAGACTTTTAGCCTTCGGCGCTATCTAATCTCTCACGTCGAGAAGAATCATCAGCAGCAGATGTACGAATGCAACGTGTGCAAATACAAGAGCAACAACAAAGGTACCCTGAAGAATCATTACATCCGGCTGCACACAAACAACTACGACTACGCGTGCGACACGTGCGGCAAGCAGTTCAAGATAAAGAAGGCTCTGAATCATCACGTGAAACAAAATCATAGCGAAGCTCCGCCGATCGTGTGCGATGTCTGCGGTCACTTCAGCAAGAACCTCCACGCCCTCAAGGCTCACATGAAGTACAGGCATTACAAGCCGGAGTTTGTCTGCCGGATATGTAGACGGGGTATGACGACGCAGGAGAATTTAGAGCGACATCTTATGTGGCACGAAACCAGAGAGAAGCCCGGCTTGATCTGCCACAGGAAGAGACATCCTGGTCCGTTGCCCCCGTTACCTGTAGTCTCCATCAAGAACATCATCACAGATGATTCACCCGTGGATCCTTTGAACGTCATGGACATTAATAATGCGGAACGCTCGCCTGAAAGCATAGAATGCGTACCCGAATACGACTTATTATCAAATAGAATTAAACGACACATCgccaagaaaagaaaaacgagaGAAGACACGAAAAAACAGAACTCTGGTCGAAACAGAGTCGACAAAAAGAGACCTAAACTTTCCTTGGAGTGTGCTACGTGCGGCAAACGTTTCAGCCAGAAAGCTACCATGATAAAACATATGAGCCTGCACAAGTATCAGTGCCAAACCTGCTGCCAGAACTTTAGTCTGAAGCGAGAGCTGAAGCGCCACATCATGAACGTTCACGGACCTCTCCTGTATCCCTGCAGCATCTGCGAGTACAAGAGCAACAACAAGTGCACCCTGAAGGATCATTTCATACGGAAACATACCAGCGGCTTCCAGCACTCCTGTTCGGTCTGCAAGAAGCAGTTCAAGATCAAGAACGATCTGAAGCAACACATGAATCAAGTGCACAGCGGCGAACCGCCTATCATCTGCAGCATCTGCGGACATGCCTGCAAGAACGTGCCCGCCATCAAGGCGCACATGAAGTATCGACACTACAAACCAGCTTACGAATGCAAGATATGCAAGCGCGGTCTGACCACGCAGGAGAATCTTGACCAACACCTCATCTGGCATGAGCGAAAGGAAAAGGTCGTCTGTCCCACCTGCGGCAAGACCTTCGGTCAAAAAAGGGATTTAGACCTTCACTTGAGGATCCATCAGGGTATCCGACCGTTCTCCTGCCCTGTCTGCGGTAAAACCTTCCCCAGAAAGACCGCGCAAGAGCAACACATATTAATTCACACCGGCAAAAAACCATATATCTGCGACATATGTGGACATACTTTTGCGCAGAAACCTGGACTCATCTGCCACAGGAAGCGGCATCCCGGACCGCTACCGCCGTTGCCTGTGGTATccattaagaaaataatcatgGACTTTACGCAGGAATTGGTCTCCTCTACGCAACAAGACAAAGTAgatagttaa
Protein Sequence: MAIKASKCLLNRLHSYCNPFQLPPPRLYQTFDDFTRNRVDPLNVESNVQKPFIRIECEWTKREKSLMERTSKRPEKISANLTREELVPRIGTEENRPTRKKTCVECDHCRRKFLKKSNLAEHLKQHRHKCTDCPKTFSLRRYLISHVEKNHQQQMYECNVCKYKSNNKGTLKNHYIRLHTNNYDYACDTCGKQFKIKKALNHHVKQNHSEAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFVCRICRRGMTTQENLERHLMWHETREKPGLICHRKRHPGPLPPLPVVSIKNIITDDSPVDPLNVMDINNAERSPESIECVPEYDLLSNRIKRHIAKKRKTREDTKKQNSGRNRVDKKRPKLSLECATCGKRFSQKATMIKHMSLHKYQCQTCCQNFSLKRELKRHIMNVHGPLLYPCSICEYKSNNKCTLKDHFIRKHTSGFQHSCSVCKKQFKIKNDLKQHMNQVHSGEPPIICSICGHACKNVPAIKAHMKYRHYKPAYECKICKRGLTTQENLDQHLIWHERKEKVVCPTCGKTFGQKRDLDLHLRIHQGIRPFSCPVCGKTFPRKTAQEQHILIHTGKKPYICDICGHTFAQKPGLICHRKRHPGPLPPLPVVSIKKIIMDFTQELVSSTQQDKVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -