Basic Information

Gene Symbol
-
Assembly
GCA_901521435.1
Location
CABEGB010001274.1:65503-70099[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3.1 7.4e+03 -2.0 0.0 2 17 163 178 162 179 0.88
2 6 2.6 6.2e+03 -1.7 0.0 15 28 216 232 212 252 0.65
3 6 1e-12 2.5e-09 38.0 0.4 1 45 258 304 258 305 0.95
4 6 1.2e-09 2.8e-06 28.2 0.3 3 44 313 358 311 360 0.95
5 6 1.6e-09 3.8e-06 27.8 0.0 1 45 366 411 366 412 0.94
6 6 4.8e-12 1.1e-08 35.9 0.1 4 43 419 458 417 461 0.95

Sequence Information

Coding Sequence
ATGAGTGAATTTGACGACTCGGATGAAGGCTCGGATATTTTGGCTGATATTCAGGCTTTGGATGAAGCTTTAGCCTTAACTGCGAAAAGAAAATCTCAACAACATATTAGTAGCAACCAACCTGATGTCTCATCCAATATCGAGGATCCTGAGAACAACGATGATTATTTTGAGTATCTTTCTACAAATCGGTATATCGACAATTCTCTGAACGCTTACGAGATTAATACAAAGTTGATTACTGGCTTGACGATAGCCAagaaacaattgattgctttaCTGGCAGAATGCGAGCAGAAGATAAAACTACTGGacgagaaaataatgaaatccAAAGATGAGTCGAACTTTAGTATCAAATCGACAATCAGGAATGCTGGTATGCCATATTTTAAGGACAAGAATAACTTCAGCGCTCCCAAGAATTATGACACTAAGTTGAAGGAAGCCCGTGGCGAGTTGTTTCTTCCAGCTATGAAAAAGCCGAACCGTTGGACGGGAAAAGATAGAGAAACGCTTTTAACCGCTATAAAGAACCAAGCTATTGAATTGGTACTGTCCAAAGGATATAAAGAGATTGACAAGTCTAATAATGAAGCTAATAcagctaataataaattggtGCTTCCCAGAAATTTTAATGAGATGGTGGAAGCGATAGGTGAGAAAGAGTTTGACTGGCATAAGATTGCCGTTGTGGATTTCGACGATAAGCATTCAGCAGGCGAATGTCAAGCAATGTGGAAAGTCTACCTGCATCCCAAAATCAAAAAGAGTGAATGGACGAACGCGGAGGATAATAAACTGCTGAAGTGTgcgaaaaaatacaaatttcaagATTGGGATGCTATTACCCAAAAACTAGGGACAAACCGTAGCGCGTACCAatgttttattagatataacaCAATCAAGAAAGTGCCGTCAGCCGGGCGTCCTTGGACCAAACAGGAGGATAAAGATCTCGTCAAAATTGTAAACGCACTTAGGATCGGAGACTACATTCCCTGGTCCGAGCTCGCCAATCACATGCGACACAGAACCAAGCAACAAATCTATGTACGATGGATGTATAGGAAAGCACCGCATTTGACAAAAGGTAGATTCACTTCCACAGAAACGTCGACTCTCCTGAGGGCGGTGAAGAAATACGGCACAAACTTCTGTAAAATTGCAAATGACGTAATGCCACATCGAAGTTCGCTGCAACTCCAAGAGCGTTATAAAACGGTGATGGCAACTCATTTAAATCTGTGGACAGTCAACGATGATctaacattaattaatctgCACTTGAAATACAATAACAATTGGTCCAAGATAGccacatatttttctaaaaagtcAAGAACACAAGTGAGACATCGGTATACCGCATTACTAAAATACGTACAGAAAGGTGTCAGTATCGAAGCTATACCTAGACCGGCCCATTCATTTCGCAATAGAAaacttttaatgaataaaaaattgtcatcTTCGTCAAAGATTTGCAATAAAACTATATTACAACCTGTTGtaaatatttgtgatattCAATTAAGATTATACGAAACTCTCTGTTTTCCACCTTcaattaaatctaataattcTGAAGAACCTTACGACAACAAACAGCTTATGCGTGATACTAACAAATTATACAACACATTGAATTTGTTAAACGCCAATCTTGATATTCCGAGTGATTTTCTGAATTATGTACAGTTAGGTAAGAGAGAAAAACAACTTTTGATTTCCTTAAAAGAACACatgaatttaagaaataacaGAATACAGAATAATGAACTAATAGAACTATTCAGAACGCAAATGTTCGGTTACGCTTCAGAAGTTAGTGGAAATGATTTCTTTGTACCGCCACCTCCATTTGAGGGGCATGTAAAGGCTAAAAAGAGCTGGAAAAAAACTCAAAGGAATACTTCTATAGATTATGATTTAGATGTCAACCAAAAATTTGTTGTTAACTTGCCTGCATATTTCTCCATAACTCATTGTAcacttaattttattgatactGAGGaagaaattcaattttctaaatttagtCAATTCTTAACGAGTGACTACTATAACTGTAACCAACAAAATGTACATTCATATAAATCGTTGAAgcgcttctttttttataaggaAAGTACTTCAAACGAAGGGAAGACCGTACTGCAGGACAATTCGGAAAATTGTGAAGAAGTAAATAAGTTGAAGGAAACTAACAGTATTAATGAAGACAATGAAGAAACGAACACGAGTAACATAATTCTACCAAATCGAGCGACTTTATtaggttttaaaaatttgctcCTTTGGAAATTACTGTACGACTATCAAAATGAATCTCATCAACAGTGTGAATCGATGATGTCACTTGGAAATGAGCAAAACATAGAACAATCGACGAATTCTCAACCTGTGAAAACGGAGAGTGCTGAATACCAGCTATTGCGAACTCGTCTAtcgcaattatttaaatttcccATAAGTTTATCGAACACCATTTTGCAAATGCAGGGGCCAGAGAAGATATTTCtaacgaaagagaaaccgACTGAGAATGTCGTTTTACCTGTTCcaacgaaaagaaaatttgaagatacAAAGCctgtgaaattaaataaaaaaaagaaaaacgttcCAGCTAATAGCCATATTCAACCCGACTCGAACGTTACAACGCAAGAACTTCCTGTACGTAGCTGCAAAATGACTCgcaaaaactataaaattatgttaaaataa
Protein Sequence
MSEFDDSDEGSDILADIQALDEALALTAKRKSQQHISSNQPDVSSNIEDPENNDDYFEYLSTNRYIDNSLNAYEINTKLITGLTIAKKQLIALLAECEQKIKLLDEKIMKSKDESNFSIKSTIRNAGMPYFKDKNNFSAPKNYDTKLKEARGELFLPAMKKPNRWTGKDRETLLTAIKNQAIELVLSKGYKEIDKSNNEANTANNKLVLPRNFNEMVEAIGEKEFDWHKIAVVDFDDKHSAGECQAMWKVYLHPKIKKSEWTNAEDNKLLKCAKKYKFQDWDAITQKLGTNRSAYQCFIRYNTIKKVPSAGRPWTKQEDKDLVKIVNALRIGDYIPWSELANHMRHRTKQQIYVRWMYRKAPHLTKGRFTSTETSTLLRAVKKYGTNFCKIANDVMPHRSSLQLQERYKTVMATHLNLWTVNDDLTLINLHLKYNNNWSKIATYFSKKSRTQVRHRYTALLKYVQKGVSIEAIPRPAHSFRNRKLLMNKKLSSSSKICNKTILQPVVNICDIQLRLYETLCFPPSIKSNNSEEPYDNKQLMRDTNKLYNTLNLLNANLDIPSDFLNYVQLGKREKQLLISLKEHMNLRNNRIQNNELIELFRTQMFGYASEVSGNDFFVPPPPFEGHVKAKKSWKKTQRNTSIDYDLDVNQKFVVNLPAYFSITHCTLNFIDTEEEIQFSKFSQFLTSDYYNCNQQNVHSYKSLKRFFFYKESTSNEGKTVLQDNSENCEEVNKLKETNSINEDNEETNTSNIILPNRATLLGFKNLLLWKLLYDYQNESHQQCESMMSLGNEQNIEQSTNSQPVKTESAEYQLLRTRLSQLFKFPISLSNTILQMQGPEKIFLTKEKPTENVVLPVPTKRKFEDTKPVKLNKKKKNVPANSHIQPDSNVTTQELPVRSCKMTRKNYKIMLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-