Clev017199.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- clz9
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000177.1:38013-39567[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 8.3e-06 26.3 0.0 6 37 59 90 54 95 0.87
Sequence Information
- Coding Sequence
- atgaaaacaaaaaaagaaagaaaacgtaaaattgataatagTAAGTCTGAAGAACCTCGACGTAAAACCTCTTCAAGATCAAAAAAAGGAACTAAAAGTAACgacttgaaaaatgtaaacagAAAAGtaacaaacaaaaacaaagTCAGAAAATTATACACAGATAAAGATGTTCAACAAGCCATACAATCTGTAGATACAGGAGTTTCTCTACGCAAAGCTGGAAAAAGTTTCAATGTTCCTGCTTCCACattgttaagaaaaattaaaaatcctgAGTCAGTAGGCAAGAAAAGTGGACCCAAAACTGTACTTTctgagaaggaagaagaagatataGTCAAGTGGCTTATCTACAGAGCAGAGACAGGTTCACCTGtgtgtaaaaaagaattattcaatAGCATTAAAACATACTTAGAtaatgaaaagagaaaaactgttttaaataataatttaccaGGTAAAAAGTGGTTTAGTAAATTTAAGTCACGTCATTCTAATGTCAGCTTAAGAGTAGCACAAAATCTTCCTCTGTGTAGAGCTAATGTAACAGAAGATAATTTAAGGAGTTGGTTTAAAGAAGTTGGCTTTTATttagagaaaagaaatttgaacAATATCAAGCCACAAAGTGTTTTCAATGTTGTAGATGCTCCCGAACGTGAAAACATGACAGCATTGTTTGTTTATAACACAGAAGGTTTGCGTGCGCCTCCAATGAtcctttttaaatacaaagaaaatttaccGAAAAGAGTCATAGAAAATTGTCCAGCTGGTTGGAGTATAGGCATGTCTGAAAATGGATGGATGAACACAGAAACTTTTTAcgaatatattacaaatatattccatccatttctcattaaaaatgaaattgaatttccaGTTTTGCTGTACATCGATGGCCATGCATCACACGTTACTGTTCCAGTTGTAAACTTTTGTagagaaaaacaaattgaaattgttAGTCTGTTTCCTCACTCAACACACATTATCCAACCTTTAGACATTGCTTATTTTCATCCCTTGAaagatgtttataaaaaaaaggcaATCCCACagtggaaaaatgaaaataataatgaaagaataaaaaaagaaaattttccaaaaattttagaaatggcagtaaatttatttgaaaatgaacAGAATGTGATCAAAAGTGGATTCAGAGCAGCTGGGCTTTATCCTTTTGATCCAGATGCAGTGGATTATGATGTTCTCACCAAaggcaaaaagaagaagaataaaaagattaattctGCAAATGTAACAGAAGAAGAAACTCAGTTAAATAATGCAAAGgatgaaaaagaattatttttattaagcttTGAAAAACAGATAAAACAGGAAttgttaaatcaatttaaacaGTGTCAAATTGGAGAATGGAATGGATCTGTAGAAAATAAAGGATTATATGATTTTTGGTGTACATTAAGAACTGACTGTTTTGGTAATTGA
- Protein Sequence
- MKTKKERKRKIDNSKSEEPRRKTSSRSKKGTKSNDLKNVNRKVTNKNKVRKLYTDKDVQQAIQSVDTGVSLRKAGKSFNVPASTLLRKIKNPESVGKKSGPKTVLSEKEEEDIVKWLIYRAETGSPVCKKELFNSIKTYLDNEKRKTVLNNNLPGKKWFSKFKSRHSNVSLRVAQNLPLCRANVTEDNLRSWFKEVGFYLEKRNLNNIKPQSVFNVVDAPERENMTALFVYNTEGLRAPPMILFKYKENLPKRVIENCPAGWSIGMSENGWMNTETFYEYITNIFHPFLIKNEIEFPVLLYIDGHASHVTVPVVNFCREKQIEIVSLFPHSTHIIQPLDIAYFHPLKDVYKKKAIPQWKNENNNERIKKENFPKILEMAVNLFENEQNVIKSGFRAAGLYPFDPDAVDYDVLTKGKKKKNKKINSANVTEEETQLNNAKDEKELFLLSFEKQIKQELLNQFKQCQIGEWNGSVENKGLYDFWCTLRTDCFGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -