Basic Information

Insect: Crataerina pallida
Gene Symbol: zld
Assembly: GCA_949710015.1
Location: OX453291.1:4066416-4070576[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.3e-05 0.0056 17.0 0.3 1 23 295 318 295 318 0.95

2 7 0.0035 0.24 11.9 2.9 1 23 606 630 606 630 0.92

3 7 7.5 5.1e+02 1.4 0.2 4 21 1076 1093 1076 1094 0.91

4 7 0.022 1.5 9.4 5.7 1 23 1253 1276 1253 1276 0.90

5 7 0.66 45 4.8 2.6 1 19 1282 1300 1282 1304 0.81

6 7 0.00015 0.01 16.2 2.5 1 23 1311 1336 1311 1336 0.97

7 7 1.9e-06 0.00013 22.2 6.7 1 23 1344 1366 1344 1366 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.3e-05	0.0056	17.0	0.3	1	23	295	318	295	318	0.95
2	7	0.0035	0.24	11.9	2.9	1	23	606	630	606	630	0.92
3	7	7.5	5.1e+02	1.4	0.2	4	21	1076	1093	1076	1094	0.91
4	7	0.022	1.5	9.4	5.7	1	23	1253	1276	1253	1276	0.90
5	7	0.66	45	4.8	2.6	1	19	1282	1300	1282	1304	0.81
6	7	0.00015	0.01	16.2	2.5	1	23	1311	1336	1311	1336	0.97
7	7	1.9e-06	0.00013	22.2	6.7	1	23	1344	1366	1344	1366	0.97

Sequence Information

Coding Sequence: ATGgccaataatataaataacgaAATGTCGACGGAAGCACTGACCGAAGTCGATGCAAATGGCTCAAATTCAAATATGAGCGGtgttaatacaacaacaatagctgGTGACAATAGTAGCATAAATCATCATCCATCCTCACACCATTCCACTCATAGTACAGCGATGCCGAACGATACAATATCAGCTGCGGCCGATTCCAGTGATAATCAACCGGATACACAACCACTACGGGGAAATGGTACTAAGGCTAGTGCCGTAGTTTCTGAACATATAGAACAACAGCATCAATCATCTAatgaacaacaaacaacacaacatcatcatcacccTCATTCCTATCCTACATATGGTGGTGTACCATCATCATTATACTCCACTGgtttatataaatctttaaatCCTTCTACAATGAATTCTCTACCCACACCTGCATCCAtccaacaacagcagcaacaacaacaccagcaGCAGCCAACCCTTTATCCTTCATACTTGAACAGCTATCAACAATTCTATcaagagcaacaacaacaacaccaacattCCACGCATATTCTCGAACCAATGGACTATATGACAACACCATCCAACCTTAATGATTTTTATGGCAATCCTGCTGGTGGTGGCAATATTAGTGGCCTTGATGAATCTAAACAAGCAGCTACCGGAATACGTTATCATCCTTACAATTTGCCACAAGCCATACCTACTCATCCTTCCGAAACTGAACAGCCGACGGCTTCATCTAGTCCAAAGATTGTTAGTTCAACAAGTCCCACAACAAACAATATTGGCGCGAGTAATCTTTCAAACCGTATTGCTGGCGTAGGTAATGATGGTGGGGCTAACAATTCCAATACGCCAACCATTGGTACGAATTATCCCTGTACAAAATGTGGCTTTACTTTTACGACGGAAATTGGATTACAGgaccatataaaatttatacacaccTCCCCCTACCAAAATAGAAATTATACCACAACACCTACAACCAATGCTACTCCTTCAGGACCCATGGACCAAACACAAAGTCAAGAAGTTATAACGTCTCATGCTATGGGCAGAACTATGAATTCTAGTAATACTGGTGTAGGCgttagtggtggtggtggtggtgttgttgtaaatgGTAATCCTGGTGAAATTTTAGACTTGGATTCCCAAAAACTCTTATATCCTCCTGGAACTGGTTCGATGAATCCCGTTAATATTTCAGGTCAACCCTTATATTCGATGCATCCTATGCAACAGAGTGGTGATATGTCGGTTTGGAATCAACAGCAAAGAGCTGATGGTGCATTACCACCGTATATGGCACCCCAGCAACAAGTATCAACGACGGACACTAAACCAATTATTCCGCAATCAAATTCACCTTTTAATAGATCACCAAAACAATCACCATTCAGTGGCAGTAGCATTAAATCTGAATATTCGGGAGTTGGTGTTAAAAGTGAATTTACGATGTCTGCTGAAGATAATCATGAATTTGCTCTTAATACGCAACAAGTAATGGCCGCCACTCCCATAATGTCATCCGGCAGTCCAGCTGAGTTCCCCTCTACCACCACCACAGAAGGATTTCAGGATGTGCAACAGCAATCATTGAATCAAAGTCACCAGTCATTAACCAAACAACAGCAACGACAATCGAAAAATGGTCATCAATATCGTGGCAGCAGTAAAAATGGTGGTAATGGAACTGCTAATTTTGAAGCACCTACGTCAAGTTCAGCAATGTCGGGAAATCAATCTGGTTCAACAAAAGCAGCAAATTGGAAATCGAATGAACCCCGCCGTCCTAAAACTTATAATTGTACTGCCTGCAATAAATGGTTTACTAGTTCAGGGCATTTAAAGCGCCACTATAATACAACCCTACACAAAAATGCTGTCAAACAAAGTGGTAAACCAGATCCATGTACTTTACCCATATCACAATTTCATCATCCGTCGCGGGATCCGAACTCTAAAGTAAATCGTAGAGGAAACGGAGGTGGAggtaataataattcaatgtcgcaaaggcaacaacaaaagcCAGCACCAGTGCAACCACCTGATCCATCTAACCAAACGCCATCTAATGTGAATAGTGTGGCGCCCATGAATTCCTTTGCGAATGCTGCATCGCCGAATTCTGGCAGCTACATGGGTACAGTACCCACCACCCATCCCTACCATGAACAACAGCAGGGGCAATTCTTAGCGCAATGTCAAACCACAACTGCAGCACCATCGGTGATAACGGGTGAAGCAGTTTCTACCATACCATACGAACAAACCGAAATCATGAACGGTCACCCAAACGGGCTAGCAGGTCTCTCCgtcccaacaacaacaatatcaatgCCGTCCTCCCCAGTGAGGGGCCTGCTGAACTTAACATCCCCAACAACGGCAACAGCCATAACCAGCATTTCACAAAAGAACGAAAGGGAGGCGGCAACAGTAACGCCAATTCAAGATCAACTAACCAGCAATCAAATTCCACTAATGCAAATCATGCAAACGGTAACGCATTATCCAATGCACGAGGAGGAGTCAATAACACTGGATGCCACCGAAACTACAACAGCGGACGATCAAGTGTGGGTTTGGCAACAGGAATTGGTGCATCATTGTGTTCCACCCCACCAGTTAGGAGTAGTACCACCCCCTTTGGTATCGGAGCTGGCGATTCGTCATTCTCCACAGCTGTTGGATTTGGATTTGCTGCGGCAGGTGGACCAAGCGGAGGAGAACAATTACAACTACCATCACATCCCACCCCTCAGCATGCATCGGGAAACACGTACGCCACTTATTACATCCCAGGGCCAGGCGGTGTCACTCCAGGGACAGCAGCAGTCGGTACCAACCAACAACATCTTTTCACTCATGCTGCCGCAGCAGCCGCTGCAGCAGCTTCCCAATATAACGGAAGTACAGCAGCGGCAGCCGCAGCCCTACCCACCCATCACACCTTTGGATATCAACATGCAGCCCAACAATACGCTGCAGCAGCAGCTGCCAGCTACTACCATCCACATTCTCACCCCCATCCCCACCACCCCCACCAATACGGACAATTCACCGCCCAATCTGGTTCCCCATACGGCGCTTCAGCCGCTAACCACcaataccaccaccaccactcaGCCACTGGACAATATCATCAATATGCCCCAACCCCTGCCGCAGTCGCAGCACATCACgctcaacaacagcaacaccaCTCATATGTGCCACCAGCCTCTGCAACAGCAGGACTCACTTCTGCAGCACCAGCTGGAACCCATCCAGATCTCTCCGCACACTACTATTGGTAATTATCCCATGAAGCGTTCGAACACACCAAACCTTGATATAATCAATACAAACGCAAATGTCGGAACAACTACCATAACGACTAATACCTTTGCCAGCACTGCCTCTAATACTAATCACATAATAACAACTGTGACTCCATCCAATGCCCATGTTAACGGAGGCTCATGCATTAGACAAATTTCACCTAGACAAGGCGACTTACCACCTAATCTAATAATGTCACAATATGACGAATTCGAAGTAAATGATGGCATGGTGGTGAACCCAGCCCTAATCACAGTAGCACCCAACAATATTCATGGAGATAACAACAAGGagaatattaatattgtttatgAGCAGCAAAACTATCACTACGCACCCGCAAAGAAGGCAAAGTTGAAAACTAAATCATCAAGGAAAGCCCCGAaaacgaaaattgaaaaatccgATGGGCCACACATTTgtgtaaaatgtaataaaaagtttactaGCCAGTGCTACCTTACGCAACATAACGATAAAATCCATTCAGGTAAATACGAATTCCGCTGCAAAATGTGTGGCAAAGGCTACAACGATGTACAAATATTCGAGAAACACGTCAAATGCCATACGAATCCGGACAAAGATTACAAGTGTACCTGGGCGTCCTGCACCAAACAATACAACCACAAGTCCGATCTAACCAGACACATTCGACTATtacatgaaaataatttagaaCTATTGCATACGTGTCAAATCTGTGGTAAGAGTTTTTGTCGCAACGACCATTTACGCAATCATATATTGTCGCATGAAAAGCGATCGAAGAAAGGGGGCAAAAGGGGttataaagtaaaacaaaatctAACAATGTAA
Protein Sequence: MANNINNEMSTEALTEVDANGSNSNMSGVNTTTIAGDNSSINHHPSSHHSTHSTAMPNDTISAAADSSDNQPDTQPLRGNGTKASAVVSEHIEQQHQSSNEQQTTQHHHHPHSYPTYGGVPSSLYSTGLYKSLNPSTMNSLPTPASIQQQQQQQHQQQPTLYPSYLNSYQQFYQEQQQQHQHSTHILEPMDYMTTPSNLNDFYGNPAGGGNISGLDESKQAATGIRYHPYNLPQAIPTHPSETEQPTASSSPKIVSSTSPTTNNIGASNLSNRIAGVGNDGGANNSNTPTIGTNYPCTKCGFTFTTEIGLQDHIKFIHTSPYQNRNYTTTPTTNATPSGPMDQTQSQEVITSHAMGRTMNSSNTGVGVSGGGGGVVVNGNPGEILDLDSQKLLYPPGTGSMNPVNISGQPLYSMHPMQQSGDMSVWNQQQRADGALPPYMAPQQQVSTTDTKPIIPQSNSPFNRSPKQSPFSGSSIKSEYSGVGVKSEFTMSAEDNHEFALNTQQVMAATPIMSSGSPAEFPSTTTTEGFQDVQQQSLNQSHQSLTKQQQRQSKNGHQYRGSSKNGGNGTANFEAPTSSSAMSGNQSGSTKAANWKSNEPRRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKQSGKPDPCTLPISQFHHPSRDPNSKVNRRGNGGGGNNNSMSQRQQQKPAPVQPPDPSNQTPSNVNSVAPMNSFANAASPNSGSYMGTVPTTHPYHEQQQGQFLAQCQTTTAAPSVITGEAVSTIPYEQTEIMNGHPNGLAGLSVPTTTISMPSSPVRGLLNLTSPTTATAITSISQKNEREAATVTPIQDQLTSNQIPLMQIMQTVTHYPMHEEESITLDATETTTADDQVWVWQQELVHHCVPPHQLGVVPPPLVSELAIRHSPQLLDLDLLRQVDQAEENNYNYHHIPPLSMHRETRTPLITSQGQAVSLQGQQQSVPTNNIFSLMLPQQPLQQLPNITEVQQRQPQPYPPITPLDINMQPNNTLQQQLPATTIHILTPIPTTPTNTDNSPPNLVPHTALQPLTTNTTTTTQPLDNIINMPQPLPQSQHITLNNSNTTHMCHQPLQQQDSLLQHQLEPIQISPHTTIGNYPMKRSNTPNLDIINTNANVGTTTITTNTFASTASNTNHIITTVTPSNAHVNGGSCIRQISPRQGDLPPNLIMSQYDEFEVNDGMVVNPALITVAPNNIHGDNNKENINIVYEQQNYHYAPAKKAKLKTKSSRKAPKTKIEKSDGPHICVKCNKKFTSQCYLTQHNDKIHSGKYEFRCKMCGKGYNDVQIFEKHVKCHTNPDKDYKCTWASCTKQYNHKSDLTRHIRLLHENNLELLHTCQICGKSFCRNDHLRNHILSHEKRSKKGGKRGYKVKQNLTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115301;
90% Identity: iTF_01115301;
80% Identity: -