Cpal009336.1
Basic Information
- Insect
- Crataerina pallida
- Gene Symbol
- dnajc2
- Assembly
- GCA_949710015.1
- Location
- OX453292.1:253456-255517[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-05 0.093 12.8 0.0 3 35 424 460 422 464 0.83 2 2 6.7e-12 7.3e-09 35.6 0.2 2 41 546 589 545 593 0.92
Sequence Information
- Coding Sequence
- ATGGCTGAAGTATTAgacataaatgtatatatttgcgtAAATAAACGTACAGTGCAAAAAGTTGGCCCAGCTTATCTGAATTCTAAACACTACAATTCCAATTATATTCAGAGTCCTAGTTCCGAGAAAACTCAAATTGTTGATGATCTTCTGGTagatattcaatttttaaaatctttggACCCAAAAGAGTGGAAAAGTCAAGATCATTATGCTGTTTTAGGTTTAGGTAAACTTCGATATAATGCTACAGATGATGATATAAGACGAGCttatagaaaaattgttttacaGCATCATCCGGATAAACGCAAAGTCATTGAAGAGAATTTTAATGCCGAAAGTGATTATTTTACATGTATAACAAAAGCGTATGAAATATTGGGAACTCCTAAGTCCAGACGTTCATATGATTCTGTTGATCCTGAATTTGATGATTCCCTTCCTTCACAACAGGATATAGAATACGATTTTTATGGAACATTGGGAAATTTTTTCCTTATAAATGGAAGATGGAGTGAACGAAGAGATGTACCTTCACTTGGTAGCGCGAATTCATCACGTAAAGAtgtagaaaaattttacaGCTTTTGGTATGATTTTAAGTCATGGCGTGAGTTTAGTTATTTGGATGAAGAGGACAAAGAAAAAGGTCAGGACCGAGATGAAAGACGTTGGATTGAGAAGGAGAATAAGGCGGCCAGAATTAAGCGTAAGAAAGAGGAGATGTTGAGAATACGTACCCTAGTTGATTTGGCTTATAATAATGATAAGAGGATTCAAAAATTCAAACTTGAGGAAAAAGAGAAGAAGTTAGCTGCTAAAAAAGCAAAGATTAATGTTGTTCAAGCCCAAAAAGCTGAACAAGAACGTGCCTTAAAAGAGGCCCAATTGGCCAAAGAAAATGCagaaaaagttgaaaagaaaCGTATTGAGCAATTAAGATTTGAGAAAGAATTGACAAAGAAAGCTTTAAAAAAGGAACGCAAATTTTTACGGGACAAAGCTAAggataataattatttttcaaacaatGAACGAAGCTTATTGGCCCATATAGAAGGGATCGAGAAGATATGCGAAATATTTACCTTAGTCGAGTTGCAGGCTTTAAACAAACAATTGGCCGAAAATCCCGCCAAAGATACTTTTCTTAATGCTCTAACAGCAGcagaattaaaaataaaaaccgaTTTAGATGAGGctacacaaaaacaaaataaaaggaaTGCCAAAAATAATGTCACAAAGCTAGTGGTGGGATCCAATATGTGGACGAATGATAATATTCAATTGTTAATTAAAGCAGTAAATTTATTTCCGGCAGGAACACCGCAGCGTTGGGATGTTATAGCTACATTCATAAATCAGCACAGCACCGACGACGTGAACATTTCTGCACAAGATGTACTTAAGAAGGCAAAGGCATTACAAAATAGTGACTTCTCTCAAAATTCTCTTAAAAATCATGTAAACGCTAGTGCTTTTGaaagttttgaaaatacaaagaGAGATCTTGTCACCACCACTGATATTACAATTAATAGAGATGGATGTTCAATAGTAAACAATAACAGTAAGTTGGGAATAAAGCTAATGAGTAAAGATACTCCATCGCCTACTAAAGTCATTAATAAAGCATGGACAAAGGAAGAACAAGCATTTCTAGAGCAAGCTATCAAAACGTATCCGATTTCTACACCCGATCGTTGGGATCATATTGCTGAATGTGTTCCGAATCGAACAAAGAAAGATTGCCTGCGCAGAGTTAAAGAACTAGTAGAAATAGTTAATTCAAAAAAAGGTGGccaaaataaaactaattattag
- Protein Sequence
- MAEVLDINVYICVNKRTVQKVGPAYLNSKHYNSNYIQSPSSEKTQIVDDLLVDIQFLKSLDPKEWKSQDHYAVLGLGKLRYNATDDDIRRAYRKIVLQHHPDKRKVIEENFNAESDYFTCITKAYEILGTPKSRRSYDSVDPEFDDSLPSQQDIEYDFYGTLGNFFLINGRWSERRDVPSLGSANSSRKDVEKFYSFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKAARIKRKKEEMLRIRTLVDLAYNNDKRIQKFKLEEKEKKLAAKKAKINVVQAQKAEQERALKEAQLAKENAEKVEKKRIEQLRFEKELTKKALKKERKFLRDKAKDNNYFSNNERSLLAHIEGIEKICEIFTLVELQALNKQLAENPAKDTFLNALTAAELKIKTDLDEATQKQNKRNAKNNVTKLVVGSNMWTNDNIQLLIKAVNLFPAGTPQRWDVIATFINQHSTDDVNISAQDVLKKAKALQNSDFSQNSLKNHVNASAFESFENTKRDLVTTTDITINRDGCSIVNNNSKLGIKLMSKDTPSPTKVINKAWTKEEQAFLEQAIKTYPISTPDRWDHIAECVPNRTKKDCLRRVKELVEIVNSKKGGQNKTNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114944;
- 90% Identity
- iTF_01114944;
- 80% Identity
- -