Cpal012019.1
Basic Information
- Insect
- Crataerina pallida
- Gene Symbol
- Jra
- Assembly
- GCA_949710015.1
- Location
- OX453293.1:2274372-2275263[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8 7e+03 -2.9 0.2 13 20 41 48 41 48 0.87 2 2 4.8e-17 3.8e-14 52.4 6.8 2 65 194 257 193 257 0.96
Sequence Information
- Coding Sequence
- ATGGTTAAATCCGAGTCGTTACCAAAAAACCTCGAGCCAGATGATTTAGAGTTTTCTACTCCGTGTACATCAGTAACATTAAGTGGCAATGCCCAAAAACGACCGGTGTCACTGGATTTAAAACAATCTGCACAAAAGTCTCGCCTTGTGGCTCCTTCGCCTTTAGTGATCGAAGCATCGgataatcaaaatataaaaccgTTAACTACACCAGATTTGGAGAAAATCCTACACTTGCTTCCCACCCCCCAACCTGGTTCATTGTTTCCCACCAAGAGTGGAACCATAACTTCAGAACAAGAAGCTTTCGGCAAAGGGTTCGAGGAAGCATTGCATAGCTTGCATACTAGTAAAAATACGCACGTGAATAATTCACCAAAAACTGGTGACACGGGTGGTGAGGTAACAGCCAATATAATTTCGTCAGGACCTGTTGCTGCTTCTGCTGCTGCATCTATTATGAGCGGTGGAACATTCACATATACCAATTTAGATAACTTTCCCGTTGCTATTAAAGATGAACCACAAAATCCACCCCCCTCACCCCCTGTCAGTCCCATTGATATGGAAACacaggaaaaaattaaattggaaCGGAAAAGGCAACGAAATCGAGTTGCAGCCTCGAAATGCCGGAAACGAAAGTTAGAGCGCATCTCCAAGTTGGAGGAAAAAGTCAAAATACTAAAAGGCGAAAACGGAGACTTGGGTGTGattgtaaaaagtttaaagGATCACGTGGCACAGTTGAAGCAACAAGTTATAGAACACATCGACTCGGGCTGCAGCATCAGGGGTATGTGCAATGGCAGTAGTttaatgcaaataaaataa
- Protein Sequence
- MVKSESLPKNLEPDDLEFSTPCTSVTLSGNAQKRPVSLDLKQSAQKSRLVAPSPLVIEASDNQNIKPLTTPDLEKILHLLPTPQPGSLFPTKSGTITSEQEAFGKGFEEALHSLHTSKNTHVNNSPKTGDTGGEVTANIISSGPVAASAAASIMSGGTFTYTNLDNFPVAIKDEPQNPPPSPPVSPIDMETQEKIKLERKRQRNRVAASKCRKRKLERISKLEEKVKILKGENGDLGVIVKSLKDHVAQLKQQVIEHIDSGCSIRGMCNGSSLMQIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114754; iTF_01113950;
- 90% Identity
- iTF_01114754; iTF_01113950;
- 80% Identity
- -