Basic Information

Insect: Craniophora ligustri
Gene Symbol: GABPB1_1
Assembly: GCA_905163465.1
Location: LR990961.1:15858965-15866743[-]

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.12 8.7e+02 0.8 0.0 13 23 310 320 310 321 0.86

2 18 0.12 8.7e+02 0.8 0.0 13 23 349 359 349 360 0.86

3 18 0.12 8.7e+02 0.8 0.0 13 23 388 398 388 399 0.86

4 18 0.12 8.7e+02 0.8 0.0 13 23 427 437 427 438 0.86

5 18 0.12 8.7e+02 0.8 0.0 13 23 466 476 466 477 0.86

6 18 0.12 8.7e+02 0.8 0.0 13 23 505 515 505 516 0.86

7 18 0.12 8.7e+02 0.8 0.0 13 23 544 554 544 555 0.86

8 18 0.12 8.7e+02 0.8 0.0 13 23 583 593 583 594 0.86

9 18 0.12 8.7e+02 0.8 0.0 13 23 622 632 622 633 0.86

10 18 0.12 8.7e+02 0.8 0.0 13 23 661 671 661 672 0.86

11 18 0.12 8.7e+02 0.8 0.0 13 23 700 710 700 711 0.86

12 18 0.12 8.7e+02 0.8 0.0 13 23 739 749 739 750 0.86

13 18 0.12 8.7e+02 0.8 0.0 13 23 778 788 778 789 0.86

14 18 0.12 8.7e+02 0.8 0.0 13 23 817 827 817 828 0.86

15 18 0.12 8.7e+02 0.8 0.0 13 23 856 866 856 867 0.86

16 18 0.12 8.7e+02 0.8 0.0 13 23 895 905 895 906 0.86

17 18 0.12 8.7e+02 0.8 0.0 13 23 934 944 934 945 0.86

18 18 0.12 8.7e+02 0.8 0.0 13 23 973 983 973 984 0.86

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.12	8.7e+02	0.8	13	23	310	320	310	321	0.86
2	18	0.12	8.7e+02	0.8	13	23	349	359	349	360	0.86
3	18	0.12	8.7e+02	0.8	13	23	388	398	388	399	0.86
4	18	0.12	8.7e+02	0.8	13	23	427	437	427	438	0.86
5	18	0.12	8.7e+02	0.8	13	23	466	476	466	477	0.86
6	18	0.12	8.7e+02	0.8	13	23	505	515	505	516	0.86
7	18	0.12	8.7e+02	0.8	13	23	544	554	544	555	0.86
8	18	0.12	8.7e+02	0.8	13	23	583	593	583	594	0.86
9	18	0.12	8.7e+02	0.8	13	23	622	632	622	633	0.86
10	18	0.12	8.7e+02	0.8	13	23	661	671	661	672	0.86
11	18	0.12	8.7e+02	0.8	13	23	700	710	700	711	0.86
12	18	0.12	8.7e+02	0.8	13	23	739	749	739	750	0.86
13	18	0.12	8.7e+02	0.8	13	23	778	788	778	789	0.86
14	18	0.12	8.7e+02	0.8	13	23	817	827	817	828	0.86
15	18	0.12	8.7e+02	0.8	13	23	856	866	856	867	0.86
16	18	0.12	8.7e+02	0.8	13	23	895	905	895	906	0.86
17	18	0.12	8.7e+02	0.8	13	23	934	944	934	945	0.86
18	18	0.12	8.7e+02	0.8	13	23	973	983	973	984	0.86

Sequence Information

Coding Sequence: ATGACATCAGACCTCTGCACTGAGGATGTGGTAGTGCGCATCTCTACACCACAAATAATTACTCCGCAGACGATGGTGTCGGGGTGCGCGGGCGGGGCGGCGGCGGGGGCGCGCGTGGCGGCGTCGTCGGCCGCCGTGGAGCTGGGCCGGCGCCTGCTGCTGGCGGCGCGCGCCGGCGACACGCAGCAGGTGCTCGACCTCATGGCCAAGGGAGCACCCTTTACCACTGACTGGCTGGGCACGTCGCCGCTGCACCTGGCGGCCGGCAACGGGCACGCGGAGACGTGCGCCGTGCTGCTGCGCGCCGGCGTGTCGCGCGACGCGCGCACCAAGGTGGAGCGCACGCCGCTGCACCTGGCGGCGGCGGGCGGGCACCGCGGCGTGGCGCGCGCGCTGCTGGCGGCGGGCGCGGCGCCGGACGGGCGCGACCTGCTGCGCATGACGCCGCTGCACTGGGCGGTGCAGCACGCGCACGCCGGCGTGGCGCGCGACCTGCTGCGCGCCGGCGCCGACCCGCACGCGCTGTCCAAGTTCCACAAGTCGCCGCTGTCGCTGGCGCTGGAGCTGCGCCGCGACGACCTCGTCAAGCTCATCGAGGACGCCGTCAAGGAGCGCGAGGCCACGCGCTCCGTCGACGCCCTCGTCTCCGAACAGATGGCGGAAATATCCCCGGTGGAACCTCAGATTCAGACTTATGAAGCTGTACATAGAATACAGGACTTAAAGCCGACTAAATCAAAACAGACAGAAAAAGCTGCCAAAACGGAATTTAAAATTGAGCGCGAAGATAGCAATGCAGGGATGGAAGGGACAACAAGCGCAGTAGGGGCTGCCGCGGCCCTGCTCCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACACTGTTGCCGCACGACGACGGCGGCTCTGTGCTCAGCGCGCTGCAGCGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACACTGTTGCCGCACGACGACGGCGGCTCTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTATGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCGCGCTGTTGCCGCACGACGACGGCAGCACTGTGCTCAGTGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCGCGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACACTGTTGCCGCACGACGACGGCGGCTCTGTGCTCAGCGCGCTGCAGCGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACACTGTTGCCGCACGACGACGGCGGCTCTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTATGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCGCGCTGTTGCCGCACGACGACGGCAGCACTGTGCTCAGTGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCGCGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGGTGAGTACGCTACACACTGTACACTGCTGCGGCAGCACGGCATCACGCTGTTGCCGCACGACGACGGCGGCACTGTGCTCAGCGCGCTGCAGAGCGGACGCACCGTTGTGCTCTCCGATGCTGGTAAATTAATGCTGAAAGAAAGTAGTGAAACATCGCCGCCGACAGCGAGCAAGGCGGGCGCGAGCGGGAACAAGGGCATGGTGCTCACGGCCACGCCCGTCAAGTCGCCGCCCAAGCCCGGCGTCAAGATCTTCACGCTCAACAACAAACTACTCGCCGTGCCCAAGGACAATAAAGTACCCGTTAAAAAGATTATCAACCCGCAAGACATGCAGGTGAAGTTCGTGCAACTGCCGCCAGACGCAAAAATCATCTCCCCATCAAAACTAGTACCCATGAAGGCTAAGAATCGTCTCACATCTCGTGTAGTCACACCCACTGTGACGTCACTAGGCGGTCAGCGACCCGCTGTCAAGATCATCATGAACAAGAGCAACTTTAACAGACTGATCGCCACGGCCGCCCGCAGCCCCGACCACAGTAGCCCTGAGGCGGCGGCGACGAGCGAGCCGGCGCCGGGCGAGGGCGACGACCCCGACAGCGACAGCCCCGCCGCCCTGCGCGCCCAGCTGGCGGCCGCCCAGCGCGCCCTGGCCGCCCTGCGCCGCGAACTGAACAGCACGCGCGCCCGCCTGGCGCTGTACGAGCGCCTGTAG
Protein Sequence: MTSDLCTEDVVVRISTPQIITPQTMVSGCAGGAAAGARVAASSAAVELGRRLLLAARAGDTQQVLDLMAKGAPFTTDWLGTSPLHLAAGNGHAETCAVLLRAGVSRDARTKVERTPLHLAAAGGHRGVARALLAAGAAPDGRDLLRMTPLHWAVQHAHAGVARDLLRAGADPHALSKFHKSPLSLALELRRDDLVKLIEDAVKEREATRSVDALVSEQMAEISPVEPQIQTYEAVHRIQDLKPTKSKQTEKAAKTEFKIEREDSNAGMEGTTSAVGAAAALLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGSVLSALQRGRTVVLSGEYATHCTLLRQHGITLLPHDDGGSVLSALQSGRTVMLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGIALLPHDDGSTVLSALQSGRTVVLSGEYATHCTLLRQHGIALLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGSVLSALQRGRTVVLSGEYATHCTLLRQHGITLLPHDDGGSVLSALQSGRTVMLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGIALLPHDDGSTVLSALQSGRTVVLSGEYATHCTLLRQHGIALLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSGEYATHCTLLRQHGITLLPHDDGGTVLSALQSGRTVVLSDAGKLMLKESSETSPPTASKAGASGNKGMVLTATPVKSPPKPGVKIFTLNNKLLAVPKDNKVPVKKIINPQDMQVKFVQLPPDAKIISPSKLVPMKAKNRLTSRVVTPTVTSLGGQRPAVKIIMNKSNFNRLIATAARSPDHSSPEAAATSEPAPGEGDDPDSDSPAALRAQLAAAQRALAALRRELNSTRARLALYERL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -