Clig006346.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_905163465.1
- Location
- LR990956.1:4783448-4785685[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.17 5.1e+03 -2.2 2.3 73 113 50 92 22 107 0.65 2 3 1.3e-101 3.8e-97 325.2 6.4 2 218 222 430 221 430 0.93 3 3 1 3e+04 -5.0 5.2 88 109 666 687 585 730 0.47
Sequence Information
- Coding Sequence
- ATGGAGAACGCAATATCAGACACAGGCGTACAGCCTTTGGAGCAGCCTGAGCAAAACATAACTGAGTGTGATAAAGACCCAGTCGCAGAAGAAGCAGAGGAAGGTGATTTTCTTGTGATAAAAGACGAAAAAGGTAGTGATAGTGATGCTCATAGTGAAGACCTTAGCTCTAATGATGAACAAAGTAATGTAATCAGTAGTAATAAATCTCAGTTTTATGAGATTAGTGACAGTAAAATAGACTATGCAGTAAAAATAGACGATAATGATACTCTAAGTGACATAGACGATATCAAAACGGACAGTGCTTCAGCTGACAGTGAAGATTCTGCTCTAGGTAGTCTACCGCCTGATGTTGCTTTAAACGACCGTGAAGAAGAAGTTCAAGATAGGTCAGAAGGCAGTGACTCCGGTCTTGGATCAGAATCTGTTCATGATGTAAAAATACCAAGCTTCAACCTTACACTTCCATGCACAAGTAGCCTAAAAAGTGTCAAATCATCAGATGATTCAGACCACATTATTGATAACTCGAGCAATAGTAGTAATGAGAACAATTTAGATAATGGCCATAGTTCTATAGCACAAGTTAAGCCTCTTAGAAGTAGTCTTAAGAGAAAATGTAGTAACGATGAAAACATAAACGAACCACATCCTAAAAAACGGAAAGGAACGATAGCATTCGATAATGTTACCGTATTTTACTTTCCCAGAGCACAAGGATTCTCATGTGTTCCATCACAAGGGGGGTCGACTTTAGGAATGGAATGGGAACATACTCATATAGAAAAATTTACGTTAGCCGAACACGCTTTAGAACAGAGAAGATTGCATCGACAAATATTGCAGCAGCTAAAAAGTGAACGTCATTCAATACAAGGTGTGTCACTTTCTTCTAGTGAAGACAGTGACACTGAAGAAGAAGCGAGCGACATTTCCGAATCAGAGTTAGATTTGGACAGTTATTTCTTCTTACAACCTGTTCCAACTAGACAGAGAAGAGCTCTATTACGAGCAGCCGGAGTGAGAAAGATAGAGGGGTATGAAAAAGATGAATGTAGAGACATAAGAACATCGCGTGAATTCTGTGGATGCGCATGTAAAGGAACTTGCAATCCAGAAAACTGTTCATGCAGCTTAGCTGGGATAAAATGCCAAGTCGACCGATTAAACTTCCCCTGTGGATGCACCAGAGACGGGTGTGCCAATACGACGGGTCGGATAGAATTTAATCCTGTAAGAGTAAGAACGCATTTTATTCAGACTCTTATGAGAATAGGTCTTGAAAAGAAAAATGAAGAGAACCAAGAAGCAGCTAAGCGACAATGGTTGGAGGCACACAATAACTCTACGTCTTGTTCATCAAATTCATCATATGAAAGAGAGCGTTGTCTCAGTCATGAAGATGGAATGTTACGTGATGTTAACCTATCTCCAAGAGTGGAAGTTGAATCTTGTGTTAATACGGGAAGTTTTAATAATGTTCATATTGATATAAATAATTCCACCGCACATAATGGAGATATGTCATACGGCTATAGAAACGAGGCTTCCAGTCATAATAATATAAATGACAACAGTATCATGCACTTTGGGCCTGCGAGCAACCATCACAGCCACAGCGACCCTTACACGTCCAGCATACTTCAAGGGAAGGGCCCGCCTTACTCAGCGGCGAACGCCATGAGTTTCGATACTGTATCCAATAATGTTCAACGATTTCCTTGCGATCTTAACTACGCTTACGAGCATCATACACAGCAGTCAGTTACTGAGCACTATTTCAAAGGCCTCCAAAGCTTCTCAGCCACCAGTTTCGAAGAATTCGCGCACAACTCCCAGATGACCATGTTTAGTCACTACGGTCACGTTTATGTACCACAAAATGTACATGATCACAATGCGCTACAATACCATAGTACACAACATAATCACTATGGAATGTACAAAAACACTTCCGAATGTGTAAACAATGAAAACAAAAGTGATACTCATTATACTACTTTAATGACATTGCCATATCAATCTAATAATAAGATGCAAACTGTAGAAAATGATGAGAATTGGTTCAGTCACAATACGCTACTGAATTTGGACCATTCTGACCAGGCAACCCAGGACGCTTCGGACTCACAGTCTCAATCTGCGAACACTCCCACGGAAGGCAATAATACCGAGACTACGGAGAACTTTGGTGAACTTATTAAGAACACTATGGTAGAGTCAGTTACTGTGTAG
- Protein Sequence
- MENAISDTGVQPLEQPEQNITECDKDPVAEEAEEGDFLVIKDEKGSDSDAHSEDLSSNDEQSNVISSNKSQFYEISDSKIDYAVKIDDNDTLSDIDDIKTDSASADSEDSALGSLPPDVALNDREEEVQDRSEGSDSGLGSESVHDVKIPSFNLTLPCTSSLKSVKSSDDSDHIIDNSSNSSNENNLDNGHSSIAQVKPLRSSLKRKCSNDENINEPHPKKRKGTIAFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHIEKFTLAEHALEQRRLHRQILQQLKSERHSIQGVSLSSSEDSDTEEEASDISESELDLDSYFFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGTCNPENCSCSLAGIKCQVDRLNFPCGCTRDGCANTTGRIEFNPVRVRTHFIQTLMRIGLEKKNEENQEAAKRQWLEAHNNSTSCSSNSSYERERCLSHEDGMLRDVNLSPRVEVESCVNTGSFNNVHIDINNSTAHNGDMSYGYRNEASSHNNINDNSIMHFGPASNHHSHSDPYTSSILQGKGPPYSAANAMSFDTVSNNVQRFPCDLNYAYEHHTQQSVTEHYFKGLQSFSATSFEEFAHNSQMTMFSHYGHVYVPQNVHDHNALQYHSTQHNHYGMYKNTSECVNNENKSDTHYTTLMTLPYQSNNKMQTVENDENWFSHNTLLNLDHSDQATQDASDSQSQSANTPTEGNNTETTENFGELIKNTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040832;
- 90% Identity
- iTF_00017351; iTF_01377487; iTF_00018177;
- 80% Identity
- -